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The map label for this gene is oxyR [H]

Identifier: 186477270

GI number: 186477270

Start: 2841272

End: 2842231

Strand: Reverse

Name: oxyR [H]

Synonym: Bphy_2522

Alternate gene names: 186477270

Gene position: 2842231-2841272 (Counterclockwise)

Preceding gene: 186477271

Following gene: 186477269

Centisome position: 81.69

GC content: 61.67

Gene sequence:

>960_bases
ATGACCCTCACTGAACTGAAATACATTGTCGCGGTAGCGCGGGAACGCCATTTTGGCCGCGCGGCAGAAGCGTGTTTCGT
GAGCCAGCCGACGTTATCGGTCGCGATCAAGAAGCTCGAAGACGAGCTGAACGTACAGATTTTCGAGCGCGGCACGAGCG
AAGTCAGCGTCACGCCAATTGGCGAGCAGATCGTCACCCAAGCGCAGCGCGTGCTCGAACAGACGCTCGCTATCAAGGAA
ATCGCCAAGCAGGGCAAGGATCCGCTGGTCGGGCCGCTGCGCCTCGGCGTGATCTACACGATCGGGCCGTACCTGCTGCC
CACGCTCGTCAAGCAGATGATCAAGCGTGTTCCGCAAATGCCGCTGATGCTGCAGGAAAACTACACGTTGAAGCTGATCG
AACTGCTGAAGCAGGGCGAAATCGACGTCGCGATCATGGCGCTGCCGTTTCCGGAAACCGGCTTGATGCTGCGTCCCCTG
TACGACGAGCCGTTCGTCGTCGCGCTGCCGTCGGGCCATGCATGGGAGTCGCGCAACAAGATCGATCCCGGCGATCTGAA
GCAGGAAACCATGCTGCTGCTCGGCAGCGGCCATTGCTTCCGCGATCACGTGCTCGGCGTGTGTCCAGAACTGATGCGCT
TCTCGCAGAACGCCGACGGCATTCAAAAGACGTTCGAGGGATCGTCGCTGGAAACCATCCGGCACATGGTTGCGAGCGGC
GTAGGCATTACGGTGCTGCCGCGCATGTCGGTGCATGAAGTGAAGCCGCACGCGGGCGGTGTCGATTCCGGCCTGCTCAG
CTACGTGCCGTTCGACGATCCCGTGCCGGATCGCCGCGTCGTGCTGGCCTGGCGCAAGAGCTTTACGCGGATGCCCGCCA
TCGACGCCATCTGCGATGCGATCGCCGCCTGCGATCTGCCCGGCGTGAAGAAGCTCGATCTGCCCGCAGCCGTCAACTAA

Upstream 100 bases:

>100_bases
TTCGCACTGCAGCATGGCTGATTCGGCTTGAAGGTTGGCGAATTGGCCCCATAGGTGTATAACAGAAACCTATCGAATTC
ATCGCCCTGATTGGTCCCCA

Downstream 100 bases:

>100_bases
ACGTTGTTGCCGCAGGATATCGACAGCCGTGCGGCTGTCGATGCATCGTCCACCGGCGCATGCATGAGCCAGCGCCTATC
GAATATATAAATATAATCAA

Product: LysR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 319; Mature: 318

Protein sequence:

>319_residues
MTLTELKYIVAVARERHFGRAAEACFVSQPTLSVAIKKLEDELNVQIFERGTSEVSVTPIGEQIVTQAQRVLEQTLAIKE
IAKQGKDPLVGPLRLGVIYTIGPYLLPTLVKQMIKRVPQMPLMLQENYTLKLIELLKQGEIDVAIMALPFPETGLMLRPL
YDEPFVVALPSGHAWESRNKIDPGDLKQETMLLLGSGHCFRDHVLGVCPELMRFSQNADGIQKTFEGSSLETIRHMVASG
VGITVLPRMSVHEVKPHAGGVDSGLLSYVPFDDPVPDRRVVLAWRKSFTRMPAIDAICDAIAACDLPGVKKLDLPAAVN

Sequences:

>Translated_319_residues
MTLTELKYIVAVARERHFGRAAEACFVSQPTLSVAIKKLEDELNVQIFERGTSEVSVTPIGEQIVTQAQRVLEQTLAIKE
IAKQGKDPLVGPLRLGVIYTIGPYLLPTLVKQMIKRVPQMPLMLQENYTLKLIELLKQGEIDVAIMALPFPETGLMLRPL
YDEPFVVALPSGHAWESRNKIDPGDLKQETMLLLGSGHCFRDHVLGVCPELMRFSQNADGIQKTFEGSSLETIRHMVASG
VGITVLPRMSVHEVKPHAGGVDSGLLSYVPFDDPVPDRRVVLAWRKSFTRMPAIDAICDAIAACDLPGVKKLDLPAAVN
>Mature_318_residues
TLTELKYIVAVARERHFGRAAEACFVSQPTLSVAIKKLEDELNVQIFERGTSEVSVTPIGEQIVTQAQRVLEQTLAIKEI
AKQGKDPLVGPLRLGVIYTIGPYLLPTLVKQMIKRVPQMPLMLQENYTLKLIELLKQGEIDVAIMALPFPETGLMLRPLY
DEPFVVALPSGHAWESRNKIDPGDLKQETMLLLGSGHCFRDHVLGVCPELMRFSQNADGIQKTFEGSSLETIRHMVASGV
GITVLPRMSVHEVKPHAGGVDSGLLSYVPFDDPVPDRRVVLAWRKSFTRMPAIDAICDAIAACDLPGVKKLDLPAAVN

Specific function: Required for the induction of a regulon of hydrogen peroxide inducible genes such as catalase and glutathione- reductase [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH lysR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1790399, Length=303, Percent_Identity=38.6138613861386, Blast_Score=209, Evalue=3e-55,
Organism=Escherichia coli, GI1787530, Length=269, Percent_Identity=28.6245353159851, Blast_Score=100, Evalue=2e-22,
Organism=Escherichia coli, GI1788748, Length=303, Percent_Identity=26.7326732673267, Blast_Score=96, Evalue=5e-21,
Organism=Escherichia coli, GI157672245, Length=311, Percent_Identity=26.6881028938907, Blast_Score=94, Evalue=1e-20,
Organism=Escherichia coli, GI1788887, Length=293, Percent_Identity=26.6211604095563, Blast_Score=90, Evalue=2e-19,
Organism=Escherichia coli, GI2367136, Length=247, Percent_Identity=28.3400809716599, Blast_Score=90, Evalue=2e-19,
Organism=Escherichia coli, GI145693105, Length=300, Percent_Identity=26.3333333333333, Blast_Score=83, Evalue=3e-17,
Organism=Escherichia coli, GI1787879, Length=303, Percent_Identity=26.4026402640264, Blast_Score=77, Evalue=1e-15,
Organism=Escherichia coli, GI1787601, Length=174, Percent_Identity=27.5862068965517, Blast_Score=77, Evalue=2e-15,
Organism=Escherichia coli, GI1790262, Length=330, Percent_Identity=26.0606060606061, Blast_Score=74, Evalue=9e-15,
Organism=Escherichia coli, GI87081904, Length=175, Percent_Identity=32.5714285714286, Blast_Score=73, Evalue=2e-14,
Organism=Escherichia coli, GI87082132, Length=274, Percent_Identity=25.1824817518248, Blast_Score=72, Evalue=5e-14,
Organism=Escherichia coli, GI1788481, Length=315, Percent_Identity=24.4444444444444, Blast_Score=71, Evalue=1e-13,
Organism=Escherichia coli, GI1786401, Length=247, Percent_Identity=27.9352226720648, Blast_Score=69, Evalue=3e-13,
Organism=Escherichia coli, GI1788296, Length=172, Percent_Identity=27.906976744186, Blast_Score=67, Evalue=1e-12,
Organism=Escherichia coli, GI1790208, Length=149, Percent_Identity=31.5436241610738, Blast_Score=64, Evalue=1e-11,
Organism=Escherichia coli, GI1787806, Length=262, Percent_Identity=21.7557251908397, Blast_Score=62, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000847
- InterPro:   IPR005119
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00126 HTH_1; PF03466 LysR_substrate [H]

EC number: NA

Molecular weight: Translated: 35168; Mature: 35037

Theoretical pI: Translated: 6.63; Mature: 6.63

Prosite motif: PS50931 HTH_LYSR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLTELKYIVAVARERHFGRAAEACFVSQPTLSVAIKKLEDELNVQIFERGTSEVSVTPI
CCHHHHHHHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHHHCEEEEECCCCEEEECCC
GEQIVTQAQRVLEQTLAIKEIAKQGKDPLVGPLRLGVIYTIGPYLLPTLVKQMIKRVPQM
CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PLMLQENYTLKLIELLKQGEIDVAIMALPFPETGLMLRPLYDEPFVVALPSGHAWESRNK
CEEECCCCHHHHHHHHHCCCCCEEEEEECCCCCCCEEEECCCCCEEEECCCCCCCCCCCC
IDPGDLKQETMLLLGSGHCFRDHVLGVCPELMRFSQNADGIQKTFEGSSLETIRHMVASG
CCCCCCCHHHEEEEECCCHHHHHHHHHCHHHHHHCCCCCHHHHHCCCCHHHHHHHHHHCC
VGITVLPRMSVHEVKPHAGGVDSGLLSYVPFDDPVPDRRVVLAWRKSFTRMPAIDAICDA
CCEEEECCCCHHHCCCCCCCCCCCHHEECCCCCCCCCCCEEHHHHHHHHCCCHHHHHHHH
IAACDLPGVKKLDLPAAVN
HHHCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TLTELKYIVAVARERHFGRAAEACFVSQPTLSVAIKKLEDELNVQIFERGTSEVSVTPI
CHHHHHHHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHHHCEEEEECCCCEEEECCC
GEQIVTQAQRVLEQTLAIKEIAKQGKDPLVGPLRLGVIYTIGPYLLPTLVKQMIKRVPQM
CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PLMLQENYTLKLIELLKQGEIDVAIMALPFPETGLMLRPLYDEPFVVALPSGHAWESRNK
CEEECCCCHHHHHHHHHCCCCCEEEEEECCCCCCCEEEECCCCCEEEECCCCCCCCCCCC
IDPGDLKQETMLLLGSGHCFRDHVLGVCPELMRFSQNADGIQKTFEGSSLETIRHMVASG
CCCCCCCHHHEEEEECCCHHHHHHHHHCHHHHHHCCCCCHHHHHCCCCHHHHHHHHHHCC
VGITVLPRMSVHEVKPHAGGVDSGLLSYVPFDDPVPDRRVVLAWRKSFTRMPAIDAICDA
CCEEEECCCCHHHCCCCCCCCCCCHHEECCCCCCCCCCCEEHHHHHHHHCCCHHHHHHHH
IAACDLPGVKKLDLPAAVN
HHHCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA