| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is pabB [H]
Identifier: 186477244
GI number: 186477244
Start: 2805305
End: 2807170
Strand: Reverse
Name: pabB [H]
Synonym: Bphy_2495
Alternate gene names: 186477244
Gene position: 2807170-2805305 (Counterclockwise)
Preceding gene: 186477245
Following gene: 186477236
Centisome position: 80.68
GC content: 64.2
Gene sequence:
>1866_bases ATGACGGCTCAAGCGACAGGCAGCGTGTTCGCGTTGCTGGACGACTGCGACTCGACCGCGAGTCGCCGGTCGAGCCGGTT ATACACGGGCTTCCGGCACGAACACGTCTGCGCTGACCCCGCTCAGCTGGATGCGGTGTGCGACGCGGCGTCGGCCGATG TCGACAGCGGTCTTTTCGCTGTCGTGCTCGCCGATTACGAGTTTGGACAGGCTTTGCAACAGGAAACGCAGCGTGCCAGT GGCTCGCTGCGTTTTTTATTGTTCGAGCACTGTCAGAAAATGTCGCGCGACGAGGTCGACCGCTGGCTCGCGCTCTACGA CAGCGCAGCCGTCGAACCGTCGGTGGCGGGCATCGGCGGCGTCCAGGCGAGCGTCGACGAAACGGCATTCACGCAGGCCA TCGATGCCGTCCACGAAGCTTTGCGTGCGGGCGACTCCTATCAGATCAACTACACCTATCGGCTGTACTTCGACGTGTTC GGCACGCCGGCCGCACTTTTCCGGCGGCTGCGCGCGCGGCAATCGGTTCATTACGGCGCACTGATCGCACTGCCTGGCGA CCGCTGGGTCGTGTCGTGTTCGCCGGAACTGTTCGTCGAGAAGAAAGGGATGTCGTTGCGCACGCGTCCAATGAAAGGGA CGGCGCCCCGCTCATCGAACCCTGAACAGGACAACGCTGCGGCCGAGTTCCTCGCTCACGATCCGAAGAATCGCGCGGAA AATGTGATGATCGTCGATCTGCTGCGCAACGACCTCTCGCGGATCGCCGAAACGGGTACGGTGAAAACACCGGCGCTGTT CTCCGTCGAACCGTATCAGTCGGTGTGGCAGATGACATCGACAGTGACGGCGATGCTGCGCCCACGCACGTCGTTCGCCG ACGTTCTGCGCGCGCTTTTCCCCTGCGGCTCAATCACGGGCGCGCCGAAGCACAAGACGATGCAATTGATCGAGCAGATA GAATCCACGCCGCGCGGCCTGTACACGGGTGCAATCGGCTGGCTCGATGCGCAGCCCGATTTCGGCGAAACCGTCGGCAA GCAGTGCGAGGACTTCTGTCTGTCGGTGGCGATTCGTACGCTGACGCTCGGCGCTGCGACGCCGCTCGCAGCGCGCCGGG GGGAAATGGGTATCGGCGCGGGCATCGTGCTCGACAGCGTGGCGCAAGACGAATACGCGGAGTGCAAATTGAAAGCACGT TTCCTGACGGAAGCCGACCCCGGCTTCCAGCTATTCGAAACGATGTATGCGACGCACGAGGGCGGCGTGCGGCATCTCGA ACGCCATCTTGCGCGGCTTGGTCACAGCGCGCGCTGGCTGGGCTTTCCATTCGACGAGGACAGCGTGCGCGCGCAACTCT GCGCGCAATGCGCGACGTTGCGCAACGCGACGCCGCACCGGATGCGGCTCACGCTGGACAAGGCCGGCGCGACGGAAATC ACGTTTGCCCCGCTCGTGCCGCTGACGGACGAAGTGGTCGGCGTGCTGCTCGGCCCCGATCACGGCTTTGCGTCGATGCA GGCGGCCGATCCGCTGCTGCTGCACAAAACGACGCGTCGCGCGGAATACGATCGCGGCTGGCGTGAAGCCGAATCACACG ATGCGTTCGACACGCTCTTTTTCAACGAGCGCGGCGAGTTGACCGAGGGCGGGCGGTCCAATGTTTTCGTGAAGCTGGAG GGACGCTGGTGGACGCCGCCGTTGTCGTCGGGCGTGTTGCCGGGCGTGATGCGTGGCGTTCTGCTCGAGGATCCCGACAT GCAGGCGGGCGAGCGCGTGTTGACGCGGGGCGACGTGTCGAATGCGCAAGCGCTGATGCTCTGCAATGCGCTGCGTGGCG CGTTGCCGGCGCGCGTTGTCGTTTGA
Upstream 100 bases:
>100_bases GCTGGTCGAAGGCGGCGCGCGTCATAGCCCGCAGAGCAAGAGCTGGTTCGACCGCGTCAAGAGCTTTTTCGACTAACGCG TTCTGAAGTTGGCGGTATGC
Downstream 100 bases:
>100_bases AGGATTGAGCCGGCAGCGGGGAAAGGCTCGCATCAACCGTGATGCCGCTGAAGCAGGCGCCCGGTCCTGAAAAGCGGCGC TCGAAAGCGCCGCCCGGCTT
Product: para-aminobenzoate synthase subunit I
Products: NA
Alternate protein names: ADC synthase; Para-aminobenzoate synthase component I [H]
Number of amino acids: Translated: 621; Mature: 620
Protein sequence:
>621_residues MTAQATGSVFALLDDCDSTASRRSSRLYTGFRHEHVCADPAQLDAVCDAASADVDSGLFAVVLADYEFGQALQQETQRAS GSLRFLLFEHCQKMSRDEVDRWLALYDSAAVEPSVAGIGGVQASVDETAFTQAIDAVHEALRAGDSYQINYTYRLYFDVF GTPAALFRRLRARQSVHYGALIALPGDRWVVSCSPELFVEKKGMSLRTRPMKGTAPRSSNPEQDNAAAEFLAHDPKNRAE NVMIVDLLRNDLSRIAETGTVKTPALFSVEPYQSVWQMTSTVTAMLRPRTSFADVLRALFPCGSITGAPKHKTMQLIEQI ESTPRGLYTGAIGWLDAQPDFGETVGKQCEDFCLSVAIRTLTLGAATPLAARRGEMGIGAGIVLDSVAQDEYAECKLKAR FLTEADPGFQLFETMYATHEGGVRHLERHLARLGHSARWLGFPFDEDSVRAQLCAQCATLRNATPHRMRLTLDKAGATEI TFAPLVPLTDEVVGVLLGPDHGFASMQAADPLLLHKTTRRAEYDRGWREAESHDAFDTLFFNERGELTEGGRSNVFVKLE GRWWTPPLSSGVLPGVMRGVLLEDPDMQAGERVLTRGDVSNAQALMLCNALRGALPARVVV
Sequences:
>Translated_621_residues MTAQATGSVFALLDDCDSTASRRSSRLYTGFRHEHVCADPAQLDAVCDAASADVDSGLFAVVLADYEFGQALQQETQRAS GSLRFLLFEHCQKMSRDEVDRWLALYDSAAVEPSVAGIGGVQASVDETAFTQAIDAVHEALRAGDSYQINYTYRLYFDVF GTPAALFRRLRARQSVHYGALIALPGDRWVVSCSPELFVEKKGMSLRTRPMKGTAPRSSNPEQDNAAAEFLAHDPKNRAE NVMIVDLLRNDLSRIAETGTVKTPALFSVEPYQSVWQMTSTVTAMLRPRTSFADVLRALFPCGSITGAPKHKTMQLIEQI ESTPRGLYTGAIGWLDAQPDFGETVGKQCEDFCLSVAIRTLTLGAATPLAARRGEMGIGAGIVLDSVAQDEYAECKLKAR FLTEADPGFQLFETMYATHEGGVRHLERHLARLGHSARWLGFPFDEDSVRAQLCAQCATLRNATPHRMRLTLDKAGATEI TFAPLVPLTDEVVGVLLGPDHGFASMQAADPLLLHKTTRRAEYDRGWREAESHDAFDTLFFNERGELTEGGRSNVFVKLE GRWWTPPLSSGVLPGVMRGVLLEDPDMQAGERVLTRGDVSNAQALMLCNALRGALPARVVV >Mature_620_residues TAQATGSVFALLDDCDSTASRRSSRLYTGFRHEHVCADPAQLDAVCDAASADVDSGLFAVVLADYEFGQALQQETQRASG SLRFLLFEHCQKMSRDEVDRWLALYDSAAVEPSVAGIGGVQASVDETAFTQAIDAVHEALRAGDSYQINYTYRLYFDVFG TPAALFRRLRARQSVHYGALIALPGDRWVVSCSPELFVEKKGMSLRTRPMKGTAPRSSNPEQDNAAAEFLAHDPKNRAEN VMIVDLLRNDLSRIAETGTVKTPALFSVEPYQSVWQMTSTVTAMLRPRTSFADVLRALFPCGSITGAPKHKTMQLIEQIE STPRGLYTGAIGWLDAQPDFGETVGKQCEDFCLSVAIRTLTLGAATPLAARRGEMGIGAGIVLDSVAQDEYAECKLKARF LTEADPGFQLFETMYATHEGGVRHLERHLARLGHSARWLGFPFDEDSVRAQLCAQCATLRNATPHRMRLTLDKAGATEIT FAPLVPLTDEVVGVLLGPDHGFASMQAADPLLLHKTTRRAEYDRGWREAESHDAFDTLFFNERGELTEGGRSNVFVKLEG RWWTPPLSSGVLPGVMRGVLLEDPDMQAGERVLTRGDVSNAQALMLCNALRGALPARVVV
Specific function: Catalyzes the biosynthesis of 4-amino-4-deoxychorismate (ADC) from chorismate and glutamine [H]
COG id: COG0147
COG function: function code EH; Anthranilate/para-aminobenzoate synthases component I
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the anthranilate synthase component I family [H]
Homologues:
Organism=Escherichia coli, GI1788114, Length=275, Percent_Identity=37.4545454545455, Blast_Score=174, Evalue=1e-44, Organism=Escherichia coli, GI1787518, Length=284, Percent_Identity=30.2816901408451, Blast_Score=102, Evalue=1e-22, Organism=Escherichia coli, GI1786809, Length=282, Percent_Identity=24.113475177305, Blast_Score=63, Evalue=5e-11, Organism=Escherichia coli, GI87082077, Length=226, Percent_Identity=24.7787610619469, Blast_Score=62, Evalue=8e-11, Organism=Saccharomyces cerevisiae, GI6320935, Length=288, Percent_Identity=29.8611111111111, Blast_Score=127, Evalue=4e-30, Organism=Saccharomyces cerevisiae, GI6324361, Length=251, Percent_Identity=28.6852589641434, Blast_Score=96, Evalue=2e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005801 - InterPro: IPR019999 - InterPro: IPR006805 - InterPro: IPR015890 [H]
Pfam domain/function: PF04715 Anth_synt_I_N; PF00425 Chorismate_bind [H]
EC number: =2.6.1.85 [H]
Molecular weight: Translated: 68040; Mature: 67909
Theoretical pI: Translated: 5.63; Mature: 5.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAQATGSVFALLDDCDSTASRRSSRLYTGFRHEHVCADPAQLDAVCDAASADVDSGLFA CCCCCCCCEEEEEHHCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEE VVLADYEFGQALQQETQRASGSLRFLLFEHCQKMSRDEVDRWLALYDSAAVEPSVAGIGG EEEECCHHHHHHHHHHHHHCCCEEHHHHHHHHHHCHHHHHHHHHHHHCCCCCCCCCCCCC VQASVDETAFTQAIDAVHEALRAGDSYQINYTYRLYFDVFGTPAALFRRLRARQSVHYGA CCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEEEECCCHHHHHHHHHHHHCCCCCE LIALPGDRWVVSCSPELFVEKKGMSLRTRPMKGTAPRSSNPEQDNAAAEFLAHDPKNRAE EEEECCCCEEEEECHHHEEECCCCCEEECCCCCCCCCCCCCCCHHHHHHHHHCCCCCHHC NVMIVDLLRNDLSRIAETGTVKTPALFSVEPYQSVWQMTSTVTAMLRPRTSFADVLRALF CEEEHHHHHHHHHHHHHCCCCCCCEEEEECHHHHHHHHHHHHHHHHCCCCHHHHHHHHHC PCGSITGAPKHKTMQLIEQIESTPRGLYTGAIGWLDAQPDFGETVGKQCEDFCLSVAIRT CCCCCCCCCCHHHHHHHHHHHCCCCCEEECCEEEECCCCCHHHHHHHHHHHHHHHHHHHH LTLGAATPLAARRGEMGIGAGIVLDSVAQDEYAECKLKARFLTEADPGFQLFETMYATHE HHHCCCCCHHHCCCCCCCCCHHHHHHHHCCHHHHHEEEEEEECCCCCCHHHHHHHHHHCC GGVRHLERHLARLGHSARWLGFPFDEDSVRAQLCAQCATLRNATPHRMRLTLDKAGATEI CHHHHHHHHHHHHCCCCEEECCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCEE TFAPLVPLTDEVVGVLLGPDHGFASMQAADPLLLHKTTRRAEYDRGWREAESHDAFDTLF EEECCCCCCCHHEEEEECCCCCCCCHHCCCCCEEEHHHHHHHHHCCHHHHCCCCCHHHEE FNERGELTEGGRSNVFVKLEGRWWTPPLSSGVLPGVMRGVLLEDPDMQAGERVLTRGDVS ECCCCCCCCCCCCCEEEEECCEEECCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHCCCCC NAQALMLCNALRGALPARVVV CHHHHHHHHHHHCCCCCEECC >Mature Secondary Structure TAQATGSVFALLDDCDSTASRRSSRLYTGFRHEHVCADPAQLDAVCDAASADVDSGLFA CCCCCCCEEEEEHHCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEE VVLADYEFGQALQQETQRASGSLRFLLFEHCQKMSRDEVDRWLALYDSAAVEPSVAGIGG EEEECCHHHHHHHHHHHHHCCCEEHHHHHHHHHHCHHHHHHHHHHHHCCCCCCCCCCCCC VQASVDETAFTQAIDAVHEALRAGDSYQINYTYRLYFDVFGTPAALFRRLRARQSVHYGA CCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEEEECCCHHHHHHHHHHHHCCCCCE LIALPGDRWVVSCSPELFVEKKGMSLRTRPMKGTAPRSSNPEQDNAAAEFLAHDPKNRAE EEEECCCCEEEEECHHHEEECCCCCEEECCCCCCCCCCCCCCCHHHHHHHHHCCCCCHHC NVMIVDLLRNDLSRIAETGTVKTPALFSVEPYQSVWQMTSTVTAMLRPRTSFADVLRALF CEEEHHHHHHHHHHHHHCCCCCCCEEEEECHHHHHHHHHHHHHHHHCCCCHHHHHHHHHC PCGSITGAPKHKTMQLIEQIESTPRGLYTGAIGWLDAQPDFGETVGKQCEDFCLSVAIRT CCCCCCCCCCHHHHHHHHHHHCCCCCEEECCEEEECCCCCHHHHHHHHHHHHHHHHHHHH LTLGAATPLAARRGEMGIGAGIVLDSVAQDEYAECKLKARFLTEADPGFQLFETMYATHE HHHCCCCCHHHCCCCCCCCCHHHHHHHHCCHHHHHEEEEEEECCCCCCHHHHHHHHHHCC GGVRHLERHLARLGHSARWLGFPFDEDSVRAQLCAQCATLRNATPHRMRLTLDKAGATEI CHHHHHHHHHHHHCCCCEEECCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCEE TFAPLVPLTDEVVGVLLGPDHGFASMQAADPLLLHKTTRRAEYDRGWREAESHDAFDTLF EEECCCCCCCHHEEEEECCCCCCCCHHCCCCCEEEHHHHHHHHHCCHHHHCCCCCHHHEE FNERGELTEGGRSNVFVKLEGRWWTPPLSSGVLPGVMRGVLLEDPDMQAGERVLTRGDVS ECCCCCCCCCCCCCEEEEECCEEECCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHCCCCC NAQALMLCNALRGALPARVVV CHHHHHHHHHHHCCCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2123867; 7584024; 9384377 [H]