| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is 186477212
Identifier: 186477212
GI number: 186477212
Start: 2764138
End: 2765640
Strand: Direct
Name: 186477212
Synonym: Bphy_2463
Alternate gene names: NA
Gene position: 2764138-2765640 (Clockwise)
Preceding gene: 186477209
Following gene: 186477213
Centisome position: 79.45
GC content: 66.13
Gene sequence:
>1503_bases ATGCGCAACAAGTACGCTACGTTGTGGATCTGGATGTGCTTGTGCCCGCTCGCCCTCGACTACAAGGCGCCGGATGCCGA TTCGGGCCACGCCGCGCAGGTTCTGCTCGTCGCCCCGACGCTCGCCGCCGCGCTCGCGCTGATCTTCATCGCGCCGCGCT TTCGCGACGCTTCCCCGCTGCGCCGCTTCGTAACGGTCTGCCTCATGCTCAGCGTGCCGGGCAGTCTGATTTCTCAACTC GTGCAAGGCAACGATTTCGGCAATTATCTGCGCGTCGTGTTGCCGTTTCTGCTGTTTCTTCTCGGCTACGCATTAGCCTG CCACCCGTGGCACGAAAACCGCATCGGGCAGATGGAAAAGGCGCTCTTCTGGGCGAATCTGATCTGTCTCGTCTTTACCT TTATCTTCGGCATCGCGACGGGCGGCGGCCTGGGCGGAATCGCCGACGTGCGCTTTCGCATCGTCTCTGTGACGCTGCTC GGACTGCAAGGCGTGCTGCTGCACGAGTTCGTGCTGGCGCGGCGCTTTTCGCCGTTCATGCTCGCCGTGTTTCTCGGCAC GGTGCTGGTCGAGCTGCTGAGCGTCACGCGCAGCCTGCTGGTGGGTACCGTGCTGCTGTTCCTGATGGCGGCATGGATGA GCGCGCCGTCGCTGCGTTATCTGCTGCGCTCCGCATTGCGCGTGTTCATCGTGAGCGTCGTGCTCGGCGCGATGGCCGCG GTCGCCATCTGGAGCATGCCGTCCGTCAGCGAACACTGGATGCAGCGCTTCACGGTGGCGGCCAACACGCAGACGGGCAA GGATCCGACCACCATCACGCGCCTCGCTGAAATGAAGGATCAGGTCGATCAGGTCACCTCGTCGACGCAATCGCTGCTGC TCGGCGAAGGCTACGGCCACTACTATCACTATTCGCCGCAGTATCTGCCCGACCTTGCGGGAACGATCAGCGCGAAGGAT TTCTACGCAATCCACGAATGGGCCGCGGGCCACAACTTCTGGATCTATCAGCTGTTCGCGGGCGGCCTGCTGTTCGGCAT CGGGTTGCCGCTGGCGGTGCTGGTGACCTTGTGGCATTGCGCCAGGGCTTACCGCCGATGGCGCGGACGCACCCCGGGCG CACCACTGCTGCCCGTGTTTGGACGCTCGATCCTGCTGCTCGCCGCGCTGCCCGCAACGTCGATCGGCGGCAATCCGCTC GGGCCGCGCTTCTCGGGACTCGTGTTCGGCGTCGCGCTCGGCCTCGCGGTCGCCACGTATTGCCGTCTGCATCGACAGCT GGATTCGAAGGCGCGCTCGCGCGTCGAGCCGGTCGCGCCGCAATCGGCGGCAGTCGCCGTCGCGCGGCACCGGCCGACGC CACCGCCCACGCAGCCGCCGCGCCCCGCACCGTTTGCCGCCGCTTCGTCGCGCGGCACGCTGCGGGACGCGTCGGGCTCC GATAGCTACGATGCGGACCGCGCGCGCGATCTGCGTCAACGAGGCATGCCGGCGTCCGCGTGA
Upstream 100 bases:
>100_bases CCCCGGGCTTGACGCCAGGCCGTCCATTTATATTCAGACTGAACAGTGGCGCGCGCCGCTGACACGATGAACGAACGCAC CGGGAAGGGGAGAATCGTCG
Downstream 100 bases:
>100_bases ACGCACCCAGGTGCATGACGCGCATCACGCAGATGGCCTCGCTTCATCGCCCGGCAGCGCCGGCCCTTTTCGCACTACGC CGTGTTATTCGCCAATGAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 500; Mature: 500
Protein sequence:
>500_residues MRNKYATLWIWMCLCPLALDYKAPDADSGHAAQVLLVAPTLAAALALIFIAPRFRDASPLRRFVTVCLMLSVPGSLISQL VQGNDFGNYLRVVLPFLLFLLGYALACHPWHENRIGQMEKALFWANLICLVFTFIFGIATGGGLGGIADVRFRIVSVTLL GLQGVLLHEFVLARRFSPFMLAVFLGTVLVELLSVTRSLLVGTVLLFLMAAWMSAPSLRYLLRSALRVFIVSVVLGAMAA VAIWSMPSVSEHWMQRFTVAANTQTGKDPTTITRLAEMKDQVDQVTSSTQSLLLGEGYGHYYHYSPQYLPDLAGTISAKD FYAIHEWAAGHNFWIYQLFAGGLLFGIGLPLAVLVTLWHCARAYRRWRGRTPGAPLLPVFGRSILLLAALPATSIGGNPL GPRFSGLVFGVALGLAVATYCRLHRQLDSKARSRVEPVAPQSAAVAVARHRPTPPPTQPPRPAPFAAASSRGTLRDASGS DSYDADRARDLRQRGMPASA
Sequences:
>Translated_500_residues MRNKYATLWIWMCLCPLALDYKAPDADSGHAAQVLLVAPTLAAALALIFIAPRFRDASPLRRFVTVCLMLSVPGSLISQL VQGNDFGNYLRVVLPFLLFLLGYALACHPWHENRIGQMEKALFWANLICLVFTFIFGIATGGGLGGIADVRFRIVSVTLL GLQGVLLHEFVLARRFSPFMLAVFLGTVLVELLSVTRSLLVGTVLLFLMAAWMSAPSLRYLLRSALRVFIVSVVLGAMAA VAIWSMPSVSEHWMQRFTVAANTQTGKDPTTITRLAEMKDQVDQVTSSTQSLLLGEGYGHYYHYSPQYLPDLAGTISAKD FYAIHEWAAGHNFWIYQLFAGGLLFGIGLPLAVLVTLWHCARAYRRWRGRTPGAPLLPVFGRSILLLAALPATSIGGNPL GPRFSGLVFGVALGLAVATYCRLHRQLDSKARSRVEPVAPQSAAVAVARHRPTPPPTQPPRPAPFAAASSRGTLRDASGS DSYDADRARDLRQRGMPASA >Mature_500_residues MRNKYATLWIWMCLCPLALDYKAPDADSGHAAQVLLVAPTLAAALALIFIAPRFRDASPLRRFVTVCLMLSVPGSLISQL VQGNDFGNYLRVVLPFLLFLLGYALACHPWHENRIGQMEKALFWANLICLVFTFIFGIATGGGLGGIADVRFRIVSVTLL GLQGVLLHEFVLARRFSPFMLAVFLGTVLVELLSVTRSLLVGTVLLFLMAAWMSAPSLRYLLRSALRVFIVSVVLGAMAA VAIWSMPSVSEHWMQRFTVAANTQTGKDPTTITRLAEMKDQVDQVTSSTQSLLLGEGYGHYYHYSPQYLPDLAGTISAKD FYAIHEWAAGHNFWIYQLFAGGLLFGIGLPLAVLVTLWHCARAYRRWRGRTPGAPLLPVFGRSILLLAALPATSIGGNPL GPRFSGLVFGVALGLAVATYCRLHRQLDSKARSRVEPVAPQSAAVAVARHRPTPPPTQPPRPAPFAAASSRGTLRDASGS DSYDADRARDLRQRGMPASA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 54530; Mature: 54530
Theoretical pI: Translated: 10.22; Mature: 10.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRNKYATLWIWMCLCPLALDYKAPDADSGHAAQVLLVAPTLAAALALIFIAPRFRDASPL CCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHCCCCCCHHHH RRFVTVCLMLSVPGSLISQLVQGNDFGNYLRVVLPFLLFLLGYALACHPWHENRIGQMEK HHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH ALFWANLICLVFTFIFGIATGGGLGGIADVRFRIVSVTLLGLQGVLLHEFVLARRFSPFM HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH LAVFLGTVLVELLSVTRSLLVGTVLLFLMAAWMSAPSLRYLLRSALRVFIVSVVLGAMAA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH VAIWSMPSVSEHWMQRFTVAANTQTGKDPTTITRLAEMKDQVDQVTSSTQSLLLGEGYGH HHHHCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC YYHYSPQYLPDLAGTISAKDFYAIHEWAAGHNFWIYQLFAGGLLFGIGLPLAVLVTLWHC CEECCCCHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH ARAYRRWRGRTPGAPLLPVFGRSILLLAALPATSIGGNPLGPRFSGLVFGVALGLAVATY HHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH CRLHRQLDSKARSRVEPVAPQSAAVAVARHRPTPPPTQPPRPAPFAAASSRGTLRDASGS HHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC DSYDADRARDLRQRGMPASA CCCCHHHHHHHHHCCCCCCC >Mature Secondary Structure MRNKYATLWIWMCLCPLALDYKAPDADSGHAAQVLLVAPTLAAALALIFIAPRFRDASPL CCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHCCCCCCHHHH RRFVTVCLMLSVPGSLISQLVQGNDFGNYLRVVLPFLLFLLGYALACHPWHENRIGQMEK HHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH ALFWANLICLVFTFIFGIATGGGLGGIADVRFRIVSVTLLGLQGVLLHEFVLARRFSPFM HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH LAVFLGTVLVELLSVTRSLLVGTVLLFLMAAWMSAPSLRYLLRSALRVFIVSVVLGAMAA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH VAIWSMPSVSEHWMQRFTVAANTQTGKDPTTITRLAEMKDQVDQVTSSTQSLLLGEGYGH HHHHCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC YYHYSPQYLPDLAGTISAKDFYAIHEWAAGHNFWIYQLFAGGLLFGIGLPLAVLVTLWHC CEECCCCHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH ARAYRRWRGRTPGAPLLPVFGRSILLLAALPATSIGGNPLGPRFSGLVFGVALGLAVATY HHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH CRLHRQLDSKARSRVEPVAPQSAAVAVARHRPTPPPTQPPRPAPFAAASSRGTLRDASGS HHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC DSYDADRARDLRQRGMPASA CCCCHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA