| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is 186477194
Identifier: 186477194
GI number: 186477194
Start: 2745788
End: 2746630
Strand: Reverse
Name: 186477194
Synonym: Bphy_2445
Alternate gene names: NA
Gene position: 2746630-2745788 (Counterclockwise)
Preceding gene: 186477195
Following gene: 186477193
Centisome position: 78.94
GC content: 65.12
Gene sequence:
>843_bases ATGAAAGCACATGTCGCTGTTGGGTGCCGACCCGGTTGGCAACGGCGCTTTGTCCACGCATGCGGCCACACGCTCCTCGA AATGACGATAGCGCTGGCGCTGGGACTGATCGTGACCGCGGGCGCGGTGTCGCTGTACCGCTCGCAGCGAATTGCCTTTG CAAAGGCGGCCGATGCAGCGCAGATCCACGATGCGGCGATGACCGCGCTGACGCTGATCGGCGAGCAGTTGCAGATGGCT GGTTTCGTTTCTGCCGACATGCCCCGTACATTCGCCGCGAGGCCTGCGCTATTTGGATGCACGGGCGGGAGGCCGATCGG TACGGACGAAAATCCGTCCTGCGAACCGCTTGCCACGCGTTCGGACGGAGTCGCGGTGCGTTATGTCGCCGACAGTATTT CTACCTGGCCGTCTGCAACCGGCCTCGCAACCGACTGCCTGGGCCAGGGCGTCGCAAAGACGGACGCCGACGCGCCGGGC GTGCCTGTCGTCAACCGCTTTTATGCAAAGGTGAGCGGCTCCACGGGTGAGCCCGAGTTGTATTGCGAAGGCACGGGGAA GGCCAATTCTTCGCAGCCGCTCGTCGAAGGTGTCGAGCGCGTGCGCTTGCGCTATTGGCTTGCGGGCGCGTCGTCGGCGG CGGACGCGGCGGCGTTGGCGCCCGCGCAATGGGCCAGCGTCGTCGCCGTCGATCTTTGCGTGCTGGTCCGGGGCACGCCG TTGACCGCGCGAACTGGCTATGTCGATTGCGACGGGGTGTCCATGATCAGTTCGGACATGCGGGTGAGGCGCGCATTCTG GCGGAGGGTTGCGATACGCAACAACGAGGGGAGCGCCACATGA
Upstream 100 bases:
>100_bases GCGACACCGCAAATCCCGGCGACACGATCGACGCGCCCGCGTCGTGCGCAGACGTGGATGCGCCGCGAGGCATGCAGTGC GTCGCGATTGCGTTCTCGCG
Downstream 100 bases:
>100_bases TCCTTTCTCGAAGCACATTGCGAGTGCGGCGCGCGCACGATCGGGGCATTGCGCTGCCCGTTGTGCTGCTGATCGCCGCG CTGATGCTGACGACTTCTGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 280; Mature: 280
Protein sequence:
>280_residues MKAHVAVGCRPGWQRRFVHACGHTLLEMTIALALGLIVTAGAVSLYRSQRIAFAKAADAAQIHDAAMTALTLIGEQLQMA GFVSADMPRTFAARPALFGCTGGRPIGTDENPSCEPLATRSDGVAVRYVADSISTWPSATGLATDCLGQGVAKTDADAPG VPVVNRFYAKVSGSTGEPELYCEGTGKANSSQPLVEGVERVRLRYWLAGASSAADAAALAPAQWASVVAVDLCVLVRGTP LTARTGYVDCDGVSMISSDMRVRRAFWRRVAIRNNEGSAT
Sequences:
>Translated_280_residues MKAHVAVGCRPGWQRRFVHACGHTLLEMTIALALGLIVTAGAVSLYRSQRIAFAKAADAAQIHDAAMTALTLIGEQLQMA GFVSADMPRTFAARPALFGCTGGRPIGTDENPSCEPLATRSDGVAVRYVADSISTWPSATGLATDCLGQGVAKTDADAPG VPVVNRFYAKVSGSTGEPELYCEGTGKANSSQPLVEGVERVRLRYWLAGASSAADAAALAPAQWASVVAVDLCVLVRGTP LTARTGYVDCDGVSMISSDMRVRRAFWRRVAIRNNEGSAT >Mature_280_residues MKAHVAVGCRPGWQRRFVHACGHTLLEMTIALALGLIVTAGAVSLYRSQRIAFAKAADAAQIHDAAMTALTLIGEQLQMA GFVSADMPRTFAARPALFGCTGGRPIGTDENPSCEPLATRSDGVAVRYVADSISTWPSATGLATDCLGQGVAKTDADAPG VPVVNRFYAKVSGSTGEPELYCEGTGKANSSQPLVEGVERVRLRYWLAGASSAADAAALAPAQWASVVAVDLCVLVRGTP LTARTGYVDCDGVSMISSDMRVRRAFWRRVAIRNNEGSAT
Specific function: Unknown
COG id: COG4966
COG function: function code NU; Tfp pilus assembly protein PilW
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29389; Mature: 29389
Theoretical pI: Translated: 8.21; Mature: 8.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKAHVAVGCRPGWQRRFVHACGHTLLEMTIALALGLIVTAGAVSLYRSQRIAFAKAADAA CCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH QIHDAAMTALTLIGEQLQMAGFVSADMPRTFAARPALFGCTGGRPIGTDENPSCEPLATR HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCEEECCCCCCCCCCCCCCCCCCCCC SDGVAVRYVADSISTWPSATGLATDCLGQGVAKTDADAPGVPVVNRFYAKVSGSTGEPEL CCCEEEEEEHHHHHCCCCCCCHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCEE YCEGTGKANSSQPLVEGVERVRLRYWLAGASSAADAAALAPAQWASVVAVDLCVLVRGTP EECCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHCHHHHHHHHHHHHHHHHCCCC LTARTGYVDCDGVSMISSDMRVRRAFWRRVAIRNNEGSAT CCCCCCEECCCCHHHHHHHHHHHHHHHHHHHEECCCCCCC >Mature Secondary Structure MKAHVAVGCRPGWQRRFVHACGHTLLEMTIALALGLIVTAGAVSLYRSQRIAFAKAADAA CCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH QIHDAAMTALTLIGEQLQMAGFVSADMPRTFAARPALFGCTGGRPIGTDENPSCEPLATR HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCEEECCCCCCCCCCCCCCCCCCCCC SDGVAVRYVADSISTWPSATGLATDCLGQGVAKTDADAPGVPVVNRFYAKVSGSTGEPEL CCCEEEEEEHHHHHCCCCCCCHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCEE YCEGTGKANSSQPLVEGVERVRLRYWLAGASSAADAAALAPAQWASVVAVDLCVLVRGTP EECCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHCHHHHHHHHHHHHHHHHCCCC LTARTGYVDCDGVSMISSDMRVRRAFWRRVAIRNNEGSAT CCCCCCEECCCCHHHHHHHHHHHHHHHHHHHEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA