Definition Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence.
Accession NC_010622
Length 3,479,187

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The map label for this gene is 186477194

Identifier: 186477194

GI number: 186477194

Start: 2745788

End: 2746630

Strand: Reverse

Name: 186477194

Synonym: Bphy_2445

Alternate gene names: NA

Gene position: 2746630-2745788 (Counterclockwise)

Preceding gene: 186477195

Following gene: 186477193

Centisome position: 78.94

GC content: 65.12

Gene sequence:

>843_bases
ATGAAAGCACATGTCGCTGTTGGGTGCCGACCCGGTTGGCAACGGCGCTTTGTCCACGCATGCGGCCACACGCTCCTCGA
AATGACGATAGCGCTGGCGCTGGGACTGATCGTGACCGCGGGCGCGGTGTCGCTGTACCGCTCGCAGCGAATTGCCTTTG
CAAAGGCGGCCGATGCAGCGCAGATCCACGATGCGGCGATGACCGCGCTGACGCTGATCGGCGAGCAGTTGCAGATGGCT
GGTTTCGTTTCTGCCGACATGCCCCGTACATTCGCCGCGAGGCCTGCGCTATTTGGATGCACGGGCGGGAGGCCGATCGG
TACGGACGAAAATCCGTCCTGCGAACCGCTTGCCACGCGTTCGGACGGAGTCGCGGTGCGTTATGTCGCCGACAGTATTT
CTACCTGGCCGTCTGCAACCGGCCTCGCAACCGACTGCCTGGGCCAGGGCGTCGCAAAGACGGACGCCGACGCGCCGGGC
GTGCCTGTCGTCAACCGCTTTTATGCAAAGGTGAGCGGCTCCACGGGTGAGCCCGAGTTGTATTGCGAAGGCACGGGGAA
GGCCAATTCTTCGCAGCCGCTCGTCGAAGGTGTCGAGCGCGTGCGCTTGCGCTATTGGCTTGCGGGCGCGTCGTCGGCGG
CGGACGCGGCGGCGTTGGCGCCCGCGCAATGGGCCAGCGTCGTCGCCGTCGATCTTTGCGTGCTGGTCCGGGGCACGCCG
TTGACCGCGCGAACTGGCTATGTCGATTGCGACGGGGTGTCCATGATCAGTTCGGACATGCGGGTGAGGCGCGCATTCTG
GCGGAGGGTTGCGATACGCAACAACGAGGGGAGCGCCACATGA

Upstream 100 bases:

>100_bases
GCGACACCGCAAATCCCGGCGACACGATCGACGCGCCCGCGTCGTGCGCAGACGTGGATGCGCCGCGAGGCATGCAGTGC
GTCGCGATTGCGTTCTCGCG

Downstream 100 bases:

>100_bases
TCCTTTCTCGAAGCACATTGCGAGTGCGGCGCGCGCACGATCGGGGCATTGCGCTGCCCGTTGTGCTGCTGATCGCCGCG
CTGATGCTGACGACTTCTGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 280; Mature: 280

Protein sequence:

>280_residues
MKAHVAVGCRPGWQRRFVHACGHTLLEMTIALALGLIVTAGAVSLYRSQRIAFAKAADAAQIHDAAMTALTLIGEQLQMA
GFVSADMPRTFAARPALFGCTGGRPIGTDENPSCEPLATRSDGVAVRYVADSISTWPSATGLATDCLGQGVAKTDADAPG
VPVVNRFYAKVSGSTGEPELYCEGTGKANSSQPLVEGVERVRLRYWLAGASSAADAAALAPAQWASVVAVDLCVLVRGTP
LTARTGYVDCDGVSMISSDMRVRRAFWRRVAIRNNEGSAT

Sequences:

>Translated_280_residues
MKAHVAVGCRPGWQRRFVHACGHTLLEMTIALALGLIVTAGAVSLYRSQRIAFAKAADAAQIHDAAMTALTLIGEQLQMA
GFVSADMPRTFAARPALFGCTGGRPIGTDENPSCEPLATRSDGVAVRYVADSISTWPSATGLATDCLGQGVAKTDADAPG
VPVVNRFYAKVSGSTGEPELYCEGTGKANSSQPLVEGVERVRLRYWLAGASSAADAAALAPAQWASVVAVDLCVLVRGTP
LTARTGYVDCDGVSMISSDMRVRRAFWRRVAIRNNEGSAT
>Mature_280_residues
MKAHVAVGCRPGWQRRFVHACGHTLLEMTIALALGLIVTAGAVSLYRSQRIAFAKAADAAQIHDAAMTALTLIGEQLQMA
GFVSADMPRTFAARPALFGCTGGRPIGTDENPSCEPLATRSDGVAVRYVADSISTWPSATGLATDCLGQGVAKTDADAPG
VPVVNRFYAKVSGSTGEPELYCEGTGKANSSQPLVEGVERVRLRYWLAGASSAADAAALAPAQWASVVAVDLCVLVRGTP
LTARTGYVDCDGVSMISSDMRVRRAFWRRVAIRNNEGSAT

Specific function: Unknown

COG id: COG4966

COG function: function code NU; Tfp pilus assembly protein PilW

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29389; Mature: 29389

Theoretical pI: Translated: 8.21; Mature: 8.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKAHVAVGCRPGWQRRFVHACGHTLLEMTIALALGLIVTAGAVSLYRSQRIAFAKAADAA
CCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
QIHDAAMTALTLIGEQLQMAGFVSADMPRTFAARPALFGCTGGRPIGTDENPSCEPLATR
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCEEECCCCCCCCCCCCCCCCCCCCC
SDGVAVRYVADSISTWPSATGLATDCLGQGVAKTDADAPGVPVVNRFYAKVSGSTGEPEL
CCCEEEEEEHHHHHCCCCCCCHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCEE
YCEGTGKANSSQPLVEGVERVRLRYWLAGASSAADAAALAPAQWASVVAVDLCVLVRGTP
EECCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHCHHHHHHHHHHHHHHHHCCCC
LTARTGYVDCDGVSMISSDMRVRRAFWRRVAIRNNEGSAT
CCCCCCEECCCCHHHHHHHHHHHHHHHHHHHEECCCCCCC
>Mature Secondary Structure
MKAHVAVGCRPGWQRRFVHACGHTLLEMTIALALGLIVTAGAVSLYRSQRIAFAKAADAA
CCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
QIHDAAMTALTLIGEQLQMAGFVSADMPRTFAARPALFGCTGGRPIGTDENPSCEPLATR
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCEEECCCCCCCCCCCCCCCCCCCCC
SDGVAVRYVADSISTWPSATGLATDCLGQGVAKTDADAPGVPVVNRFYAKVSGSTGEPEL
CCCEEEEEEHHHHHCCCCCCCHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCEE
YCEGTGKANSSQPLVEGVERVRLRYWLAGASSAADAAALAPAQWASVVAVDLCVLVRGTP
EECCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHCHHHHHHHHHHHHHHHHCCCC
LTARTGYVDCDGVSMISSDMRVRRAFWRRVAIRNNEGSAT
CCCCCCEECCCCHHHHHHHHHHHHHHHHHHHEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA