| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is 186477183
Identifier: 186477183
GI number: 186477183
Start: 2736518
End: 2737828
Strand: Reverse
Name: 186477183
Synonym: Bphy_2434
Alternate gene names: NA
Gene position: 2737828-2736518 (Counterclockwise)
Preceding gene: 186477184
Following gene: 186477179
Centisome position: 78.69
GC content: 64.61
Gene sequence:
>1311_bases ATGAACGCATCGAGCGATCTTCAGGCGACGCTCGACGCGTCGCGCAAGAGTTGGGTCGAATCGGCGAACGATCCGTCCTG TGATTTTTCGATCCAGAATCTGCCGTTCGGCATCTTCAGCGATGGACTCAACGCAACCCGCCGTGCCGGCGTCGCGCTCG GCGACTGCATCGTCGATCTGGCGGCGCTCGAAAGCGCGGGGCTGTTGACGGTGCCGTCCTCGGGCGCAGGCGACAGCGTG TTCGTGCGCGACGCGCTCAACGATTTCATCGCGCTCGGCCGCGATGCGTGGCGCAGCGTGCGCATCCAGTTGAGCAAGCT GCTGTCGCGCGATAATCCGGTGCTGCGCGACGACGCCGAACTGCGCAGCCGCGCGCTGATCCGCCAAGGCGACGCAGCGC TGCATCTGCCCGTGCAGATTCCGGGCTACACGGACTTCTATTCGTCGAAGGAACACGCCACCAATGTCGGCTCGATGTTC CGCGATCCGAAGAACGCGCTGCTGCCGAACTGGCTGGAAATCCCAATCGGGTATAACGGGCGGGCGTCGTCGGTGGTGGT GAGCGGCACGCCCGTGCGCCGTCCCAACGGCCAGTTGAAGCTGCCCGATCAGGAACGGCCGGTGTTCGGCGCGTGCCGCA AGCTCGATATCGAGCTGGAGACGGGCTTTATCGTCGGACGCGGCAATGCGCTCGGCGAGCCGATCCCCTGCGAACAGGCG GAAGACCACATTTTCGGCATGGTGCTGCTGAACGACTGGAGCGCTCGCGACATCCAGCAATGGGAATACGTGCCGCTCGG GCCGTTCAATTCCAAAGGCTTCGCGACTACGATCTCGCCGTGGATCGTCACGCTCGACGCGCTCGAACCGTTCCGCGTCG CGCAACCCGTGCAGGATCCGCAGCCGCTCGACTATCTGCGCCAGGGCGGCGAGCATGGCTTCGATATCTCGCTTGAAGTG CTGCTGAAGCCGAAGGGCGCGAAGGAAGCGACGACGATCTCGCGCACCAACTTCCGTCACATGTACTGGACGATGGCGCA GCAGCTTGCGCATCACACGGTATCGGGCTGCAATACGCGCGTCGGCGATCTGATGGGTTCGGGCACGATCAGCGGGCCGA CGGGCGATTCGTTCGGCAGCCTGCTCGAACTGACGTGGAACGGGAAGAATCCGCTGCAACTGCCTGACGGCAGCACGCGC GCCTTCATTGAGGACGGCGACGAACTCACGCTCGCCGGATGGTGCCAGGGCGACGGCTATCGCGTCGGCTTTGGCACGTG CGTCGGCGAGATCGTGCCGGCGCAGCGCTGA
Upstream 100 bases:
>100_bases TCATCAAGCCGACCCGCTTCGCATTGGAAACGGCGCAGCTTCAGGCGCATTACTTCGAATGCTGGCAAGGTCTCGAGAAA CATTTCAACCCGGAGCAACG
Downstream 100 bases:
>100_bases ATCGCCCGCGAAATCAGGACGCGGCGCGCGCCACGCCGCGTCTTTTTTCCCACAGCATCGCCGCGAGAAACGCCAACGCG CTCGCGAGCACGACGCCGAT
Product: fumarylacetoacetase
Products: acetoacetate; fumarate
Alternate protein names: Fumarylacetoacetate Hydrolase; Hydroxylase; Fumarylacetoacetate Hydrolase Family Protein; 2-Hydroxyhepta-2 4-Diene-1 7-Dioate Isomerase; Fumarylacetoacetate Hydrolase Domain-Containing; Fumarylacetoacetase Hydrolase; LOW QUALITY PROTEIN Fumarylacetoacetase
Number of amino acids: Translated: 436; Mature: 436
Protein sequence:
>436_residues MNASSDLQATLDASRKSWVESANDPSCDFSIQNLPFGIFSDGLNATRRAGVALGDCIVDLAALESAGLLTVPSSGAGDSV FVRDALNDFIALGRDAWRSVRIQLSKLLSRDNPVLRDDAELRSRALIRQGDAALHLPVQIPGYTDFYSSKEHATNVGSMF RDPKNALLPNWLEIPIGYNGRASSVVVSGTPVRRPNGQLKLPDQERPVFGACRKLDIELETGFIVGRGNALGEPIPCEQA EDHIFGMVLLNDWSARDIQQWEYVPLGPFNSKGFATTISPWIVTLDALEPFRVAQPVQDPQPLDYLRQGGEHGFDISLEV LLKPKGAKEATTISRTNFRHMYWTMAQQLAHHTVSGCNTRVGDLMGSGTISGPTGDSFGSLLELTWNGKNPLQLPDGSTR AFIEDGDELTLAGWCQGDGYRVGFGTCVGEIVPAQR
Sequences:
>Translated_436_residues MNASSDLQATLDASRKSWVESANDPSCDFSIQNLPFGIFSDGLNATRRAGVALGDCIVDLAALESAGLLTVPSSGAGDSV FVRDALNDFIALGRDAWRSVRIQLSKLLSRDNPVLRDDAELRSRALIRQGDAALHLPVQIPGYTDFYSSKEHATNVGSMF RDPKNALLPNWLEIPIGYNGRASSVVVSGTPVRRPNGQLKLPDQERPVFGACRKLDIELETGFIVGRGNALGEPIPCEQA EDHIFGMVLLNDWSARDIQQWEYVPLGPFNSKGFATTISPWIVTLDALEPFRVAQPVQDPQPLDYLRQGGEHGFDISLEV LLKPKGAKEATTISRTNFRHMYWTMAQQLAHHTVSGCNTRVGDLMGSGTISGPTGDSFGSLLELTWNGKNPLQLPDGSTR AFIEDGDELTLAGWCQGDGYRVGFGTCVGEIVPAQR >Mature_436_residues MNASSDLQATLDASRKSWVESANDPSCDFSIQNLPFGIFSDGLNATRRAGVALGDCIVDLAALESAGLLTVPSSGAGDSV FVRDALNDFIALGRDAWRSVRIQLSKLLSRDNPVLRDDAELRSRALIRQGDAALHLPVQIPGYTDFYSSKEHATNVGSMF RDPKNALLPNWLEIPIGYNGRASSVVVSGTPVRRPNGQLKLPDQERPVFGACRKLDIELETGFIVGRGNALGEPIPCEQA EDHIFGMVLLNDWSARDIQQWEYVPLGPFNSKGFATTISPWIVTLDALEPFRVAQPVQDPQPLDYLRQGGEHGFDISLEV LLKPKGAKEATTISRTNFRHMYWTMAQQLAHHTVSGCNTRVGDLMGSGTISGPTGDSFGSLLELTWNGKNPLQLPDGSTR AFIEDGDELTLAGWCQGDGYRVGFGTCVGEIVPAQR
Specific function: Unknown
COG id: COG0179
COG function: function code Q; 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI4557587, Length=418, Percent_Identity=57.177033492823, Blast_Score=503, Evalue=1e-142, Organism=Caenorhabditis elegans, GI17568863, Length=411, Percent_Identity=54.9878345498783, Blast_Score=463, Evalue=1e-130, Organism=Drosophila melanogaster, GI24657182, Length=412, Percent_Identity=52.6699029126214, Blast_Score=435, Evalue=1e-122,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 3.7.1.2
Molecular weight: Translated: 47411; Mature: 47411
Theoretical pI: Translated: 4.86; Mature: 4.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNASSDLQATLDASRKSWVESANDPSCDFSIQNLPFGIFSDGLNATRRAGVALGDCIVDL CCCCCCHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCHHHCCCCHHHHCCCCHHHHHHHH AALESAGLLTVPSSGAGDSVFVRDALNDFIALGRDAWRSVRIQLSKLLSRDNPVLRDDAE HHHCCCCEEECCCCCCCCCEEHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCCCCCHH LRSRALIRQGDAALHLPVQIPGYTDFYSSKEHATNVGSMFRDPKNALLPNWLEIPIGYNG HHHHHHHHCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHCCCCHHCCCCEEEECCCCCC RASSVVVSGTPVRRPNGQLKLPDQERPVFGACRKLDIELETGFIVGRGNALGEPIPCEQA CCCEEEEECCCCCCCCCCEECCCCCCCHHHHHEEEEEEEECCEEEECCCCCCCCCCCCCC EDHIFGMVLLNDWSARDIQQWEYVPLGPFNSKGFATTISPWIVTLDALEPFRVAQPVQDP CCCEEEEEEECCCCCCCCCCCCEEECCCCCCCCCEEECCCEEEEEECCCCHHHHCCCCCC QPLDYLRQGGEHGFDISLEVLLKPKGAKEATTISRTNFRHMYWTMAQQLAHHTVSGCNTR CCHHHHHCCCCCCCCEEEEEEECCCCCCCHHEEECCCCHHHHHHHHHHHHHHHHHCCCCH VGDLMGSGTISGPTGDSFGSLLELTWNGKNPLQLPDGSTRAFIEDGDELTLAGWCQGDGY HHHHCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCEEEEECCCEEEEEEEECCCCE RVGFGTCVGEIVPAQR EEEHHHHHHHHCCCCC >Mature Secondary Structure MNASSDLQATLDASRKSWVESANDPSCDFSIQNLPFGIFSDGLNATRRAGVALGDCIVDL CCCCCCHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCHHHCCCCHHHHCCCCHHHHHHHH AALESAGLLTVPSSGAGDSVFVRDALNDFIALGRDAWRSVRIQLSKLLSRDNPVLRDDAE HHHCCCCEEECCCCCCCCCEEHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCCCCCHH LRSRALIRQGDAALHLPVQIPGYTDFYSSKEHATNVGSMFRDPKNALLPNWLEIPIGYNG HHHHHHHHCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHCCCCHHCCCCEEEECCCCCC RASSVVVSGTPVRRPNGQLKLPDQERPVFGACRKLDIELETGFIVGRGNALGEPIPCEQA CCCEEEEECCCCCCCCCCEECCCCCCCHHHHHEEEEEEEECCEEEECCCCCCCCCCCCCC EDHIFGMVLLNDWSARDIQQWEYVPLGPFNSKGFATTISPWIVTLDALEPFRVAQPVQDP CCCEEEEEEECCCCCCCCCCCCEEECCCCCCCCCEEECCCEEEEEECCCCHHHHCCCCCC QPLDYLRQGGEHGFDISLEVLLKPKGAKEATTISRTNFRHMYWTMAQQLAHHTVSGCNTR CCHHHHHCCCCCCCCEEEEEEECCCCCCCHHEEECCCCHHHHHHHHHHHHHHHHHCCCCH VGDLMGSGTISGPTGDSFGSLLELTWNGKNPLQLPDGSTRAFIEDGDELTLAGWCQGDGY HHHHCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCEEEEECCCEEEEEEEECCCCE RVGFGTCVGEIVPAQR EEEHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: 4-fumarylacetoacetate; H2O
Specific reaction: 4-fumarylacetoacetate + H2O = acetoacetate + fumarate
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA