Click here to switch to the map view.

The map label for this gene is ugpE [C]

Identifier: 186477100

GI number: 186477100

Start: 2634937

End: 2635788

Strand: Reverse

Name: ugpE [C]

Synonym: Bphy_2349

Alternate gene names: 186477100

Gene position: 2635788-2634937 (Counterclockwise)

Preceding gene: 186477101

Following gene: 186477097

Centisome position: 75.76

GC content: 60.8

Gene sequence:

>852_bases
ATGTATCCGATGCCCGTCGCCAAATGGAAGCCCGTCAACCGGCGGCTGTACAAACTCTCGCTGCCCGTCGCGCTGCTGAT
CTGGCTGCTGCCGATGATCGCCGTGCTCGTCACGTCGGTGCGCTCAACGGAAGAACTGAGCGAAGGCAATTACTGGGGCT
GGCCGAAGCACATCGCGCTGATCGACAACTACCGCGAAGCGCTCACGACGTCGCCGATGCTGCATTACTTCTGGAACAGC
GTGCTGATTACGGTGCCGTCCGTGATCGGCTCCATTACGCTGGCGGCGATGGCGGGCTTCGCGCTCGCCATCTACAAGTT
TCGCGGCAACACGACGCTGTTCGCAACCTTCGTTGCGGGCAACTTCGTGCCGATCCAGATCCTGATGATTCCCGTGCGTG
ACCTGTCGCTGAGCCTCGGCATCTTCAATACGCTCAGCGCGCTGGTTCTCTTTCACGTGGCGTTTCAGACGGGCTTTTGT
GCGCTATTCCTGCGCAACTTCATCAAGCAGCTGCCGTACGAACTTGTGGAGGCGGCGCGCATCGAAGGCGCGGGCGAGTG
GACCGTGTTCTTCAGGATCGTGCTGCCGCTGATTCGACCGGCGCTTGCCGCACTTGCCATTCTTGTCTTCACGTTCGTCT
GGAACGATTACTTCTGGGCGCTGTGTCTGACGCAGGGTGACGAGGCCGCGCCGATCACGGTCGGTGTCGCGGCGCTCAAG
GGGCAATGGACGACAGCGTGGAATCTCGTGTCGGCAGGCTCGATCCTTGCCGCGTTGCCTTCCGTTGCCATGTTCTTCGC
CATGCAAAAGCACTTCGTGGCAGGGCTTACGTTCGGCGCCACGAAAGGCTGA

Upstream 100 bases:

>100_bases
CGGCATCGATTGCCGTCGTGCTGTTCGCGATCATGCTCGTCTACATCGTCTATCACCTGCGCCGCATGCTGCGCAACGAA
CAGTAAGCAAGGAGCGACTC

Downstream 100 bases:

>100_bases
GCGTGTTTCGTCGATGTCTCCTGGTAGAAGGTTGCCCGCGTAAGCGGGCTTTTTTATCTTTATGCCCGCGATGCGCGCTA
TTGGCCCGGTTGCACGGCAG

Product: binding-protein-dependent transport systems inner membrane component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 283; Mature: 283

Protein sequence:

>283_residues
MYPMPVAKWKPVNRRLYKLSLPVALLIWLLPMIAVLVTSVRSTEELSEGNYWGWPKHIALIDNYREALTTSPMLHYFWNS
VLITVPSVIGSITLAAMAGFALAIYKFRGNTTLFATFVAGNFVPIQILMIPVRDLSLSLGIFNTLSALVLFHVAFQTGFC
ALFLRNFIKQLPYELVEAARIEGAGEWTVFFRIVLPLIRPALAALAILVFTFVWNDYFWALCLTQGDEAAPITVGVAALK
GQWTTAWNLVSAGSILAALPSVAMFFAMQKHFVAGLTFGATKG

Sequences:

>Translated_283_residues
MYPMPVAKWKPVNRRLYKLSLPVALLIWLLPMIAVLVTSVRSTEELSEGNYWGWPKHIALIDNYREALTTSPMLHYFWNS
VLITVPSVIGSITLAAMAGFALAIYKFRGNTTLFATFVAGNFVPIQILMIPVRDLSLSLGIFNTLSALVLFHVAFQTGFC
ALFLRNFIKQLPYELVEAARIEGAGEWTVFFRIVLPLIRPALAALAILVFTFVWNDYFWALCLTQGDEAAPITVGVAALK
GQWTTAWNLVSAGSILAALPSVAMFFAMQKHFVAGLTFGATKG
>Mature_283_residues
MYPMPVAKWKPVNRRLYKLSLPVALLIWLLPMIAVLVTSVRSTEELSEGNYWGWPKHIALIDNYREALTTSPMLHYFWNS
VLITVPSVIGSITLAAMAGFALAIYKFRGNTTLFATFVAGNFVPIQILMIPVRDLSLSLGIFNTLSALVLFHVAFQTGFC
ALFLRNFIKQLPYELVEAARIEGAGEWTVFFRIVLPLIRPALAALAILVFTFVWNDYFWALCLTQGDEAAPITVGVAALK
GQWTTAWNLVSAGSILAALPSVAMFFAMQKHFVAGLTFGATKG

Specific function: Probably part of a binding-protein-dependent transport system PH1214/15/16. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0395

COG function: function code G; ABC-type sugar transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1789860, Length=210, Percent_Identity=29.5238095238095, Blast_Score=99, Evalue=4e-22,
Organism=Escherichia coli, GI1787571, Length=277, Percent_Identity=28.158844765343, Blast_Score=96, Evalue=2e-21,
Organism=Escherichia coli, GI1790464, Length=221, Percent_Identity=27.1493212669683, Blast_Score=69, Evalue=3e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 31326; Mature: 31326

Theoretical pI: Translated: 9.74; Mature: 9.74

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYPMPVAKWKPVNRRLYKLSLPVALLIWLLPMIAVLVTSVRSTEELSEGNYWGWPKHIAL
CCCCCCCCCCCCCHHHEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHH
IDNYREALTTSPMLHYFWNSVLITVPSVIGSITLAAMAGFALAIYKFRGNTTLFATFVAG
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCEEEEEECCC
NFVPIQILMIPVRDLSLSLGIFNTLSALVLFHVAFQTGFCALFLRNFIKQLPYELVEAAR
CCEEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
IEGAGEWTVFFRIVLPLIRPALAALAILVFTFVWNDYFWALCLTQGDEAAPITVGVAALK
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCEEEHHHHC
GQWTTAWNLVSAGSILAALPSVAMFFAMQKHFVAGLTFGATKG
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MYPMPVAKWKPVNRRLYKLSLPVALLIWLLPMIAVLVTSVRSTEELSEGNYWGWPKHIAL
CCCCCCCCCCCCCHHHEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHH
IDNYREALTTSPMLHYFWNSVLITVPSVIGSITLAAMAGFALAIYKFRGNTTLFATFVAG
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCEEEEEECCC
NFVPIQILMIPVRDLSLSLGIFNTLSALVLFHVAFQTGFCALFLRNFIKQLPYELVEAAR
CCEEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
IEGAGEWTVFFRIVLPLIRPALAALAILVFTFVWNDYFWALCLTQGDEAAPITVGVAALK
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCEEEHHHHC
GQWTTAWNLVSAGSILAALPSVAMFFAMQKHFVAGLTFGATKG
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9679194 [H]