Definition Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence.
Accession NC_010622
Length 3,479,187

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The map label for this gene is yqgE [C]

Identifier: 186477078

GI number: 186477078

Start: 2610857

End: 2611432

Strand: Reverse

Name: yqgE [C]

Synonym: Bphy_2327

Alternate gene names: 186477078

Gene position: 2611432-2610857 (Counterclockwise)

Preceding gene: 186477079

Following gene: 186477077

Centisome position: 75.06

GC content: 61.11

Gene sequence:

>576_bases
ATGCCCAAGAGTAACGATCGCATCAATCTGACCAACCAGTTTCTGATCGCCATGCCGAACATGGCGGACCCGACGTTTTC
AGGAACGGTGGTCTACCTTTGCGATCACAGCGAGCGTGGTGCCCTCGGCCTCGTCATCAACCGGCCGACGGACATCGACC
TTCAGGCGCTCTTCAATCGCATCGATCTCAAGCTCGAGATCGAGCCTCTGTTGCATGTCCCCGTGTATTTCGGCGGCCCG
GTGCAAACCGAGCGCGGCTTCGTGCTGCATGATGCATCGGAAAACACCTACACGTCGTCGATGCAGGTGCCGGGTGGCCT
CGAAATGACCACATCGAAAGACGTGCTCGAAGCTGTCGCCAGCGGCAAGGGCCCGGAGCGCTTCCTGCTGACGCTCGGCC
ACGCAGGCTGGGGCGCGGGGCAACTCGAAGACGAAATCTCGAAGAACGGGTGGCTCACGGTCGAAGCCGATCCAAAGATC
GTCTTCGACGTGCCCGCCGAAAACCGTTTCGAAGCGGCGCTCGCGCTGCTCGGCATCTCGTCTTCGATGCTCTCCGGCGA
CGCAGGGCACGCATGA

Upstream 100 bases:

>100_bases
TTGCAAACTGCCTGCCGGCACGGCTGGCCACCCGCCTGCTGCGATTCTGGCGCAAGCGCGAGCCCGGCAGTCGCGCATTG
TCTTTGCTAAACTTCGACCT

Downstream 100 bases:

>100_bases
GCGGTGTGGCCGGACGTGAGGCGACGCTGCTTGCGTTCGACTACGGCGAAAAGCGGATTGGCGTTGCCGTCGGCAATTCG
CTCACGCGCAGCGCCCGGCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 191; Mature: 190

Protein sequence:

>191_residues
MPKSNDRINLTNQFLIAMPNMADPTFSGTVVYLCDHSERGALGLVINRPTDIDLQALFNRIDLKLEIEPLLHVPVYFGGP
VQTERGFVLHDASENTYTSSMQVPGGLEMTTSKDVLEAVASGKGPERFLLTLGHAGWGAGQLEDEISKNGWLTVEADPKI
VFDVPAENRFEAALALLGISSSMLSGDAGHA

Sequences:

>Translated_191_residues
MPKSNDRINLTNQFLIAMPNMADPTFSGTVVYLCDHSERGALGLVINRPTDIDLQALFNRIDLKLEIEPLLHVPVYFGGP
VQTERGFVLHDASENTYTSSMQVPGGLEMTTSKDVLEAVASGKGPERFLLTLGHAGWGAGQLEDEISKNGWLTVEADPKI
VFDVPAENRFEAALALLGISSSMLSGDAGHA
>Mature_190_residues
PKSNDRINLTNQFLIAMPNMADPTFSGTVVYLCDHSERGALGLVINRPTDIDLQALFNRIDLKLEIEPLLHVPVYFGGPV
QTERGFVLHDASENTYTSSMQVPGGLEMTTSKDVLEAVASGKGPERFLLTLGHAGWGAGQLEDEISKNGWLTVEADPKIV
FDVPAENRFEAALALLGISSSMLSGDAGHA

Specific function: Unknown

COG id: COG1678

COG function: function code K; Putative transcriptional regulator

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0301 (AlgH) family [H]

Homologues:

Organism=Escherichia coli, GI87082187, Length=190, Percent_Identity=41.0526315789474, Blast_Score=153, Evalue=8e-39,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003774 [H]

Pfam domain/function: PF02622 DUF179 [H]

EC number: NA

Molecular weight: Translated: 20610; Mature: 20478

Theoretical pI: Translated: 4.43; Mature: 4.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPKSNDRINLTNQFLIAMPNMADPTFSGTVVYLCDHSERGALGLVINRPTDIDLQALFNR
CCCCCCEEEECCEEEEEECCCCCCCCCCEEEEEEECCCCCEEEEEEECCCCCCHHHHHHH
IDLKLEIEPLLHVPVYFGGPVQTERGFVLHDASENTYTSSMQVPGGLEMTTSKDVLEAVA
CCEEEEEEEEEEEEEEECCCCCCCCCEEEECCCCCCEECEEECCCCCEECCCHHHHHHHH
SGKGPERFLLTLGHAGWGAGQLEDEISKNGWLTVEADPKIVFDVPAENRFEAALALLGIS
CCCCCCEEEEEECCCCCCCCCCHHHHCCCCCEEEECCCEEEEECCCCCHHHHHHHHHCCC
SSMLSGDAGHA
HHHCCCCCCCC
>Mature Secondary Structure 
PKSNDRINLTNQFLIAMPNMADPTFSGTVVYLCDHSERGALGLVINRPTDIDLQALFNR
CCCCCEEEECCEEEEEECCCCCCCCCCEEEEEEECCCCCEEEEEEECCCCCCHHHHHHH
IDLKLEIEPLLHVPVYFGGPVQTERGFVLHDASENTYTSSMQVPGGLEMTTSKDVLEAVA
CCEEEEEEEEEEEEEEECCCCCCCCCEEEECCCCCCEECEEECCCCCEECCCHHHHHHHH
SGKGPERFLLTLGHAGWGAGQLEDEISKNGWLTVEADPKIVFDVPAENRFEAALALLGIS
CCCCCCEEEEEECCCCCCCCCCHHHHCCCCCEEEECCCEEEEECCCCCHHHHHHHHHCCC
SSMLSGDAGHA
HHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA