| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is 186477049
Identifier: 186477049
GI number: 186477049
Start: 2579180
End: 2581789
Strand: Direct
Name: 186477049
Synonym: Bphy_2298
Alternate gene names: NA
Gene position: 2579180-2581789 (Clockwise)
Preceding gene: 186477048
Following gene: 186477050
Centisome position: 74.13
GC content: 62.61
Gene sequence:
>2610_bases TTGCTTTTGCTTTTTTTGCTGCCCGTCATTGCGGCGCTGCCCGGACTCGCAGGCCTTTATCACGCGAACCCGATGCTGTA TCTGGGTATGCTGGCGCAGCACTACAAGCCCGGCCTGACACAAGGCATGCCGTACGTCGATCCTAACAACGCCTTTACCG CTCAGGCGCTCGGCTATCGCGCGGCGCTGTACTGGCTCCACGGCACCGTTCCCTGGTGGAATTATTTTTCGGGCGTCGGC TTGCCGCTCGCGGCCGAATATCAGCCCGCCGCATTCTTCCCGCCGACCTTGATGCTGCTGTTGCCCAACGGGATGCTGCT GCAGCACATCCTGCTGCAAATCATCGCGGGCTGGGGAACATACGGCCTGCTGCGGCAGTTGGGACTAAGCTGCTTTGCCG CCGCGACGGGCGGCGCCCTCTTCGCATTCAACGGCGCGCTTGCCTGGTTCGATCACGCACCGGCCCTGCCTGTGCCTTTC TTGCCGTGGATGCTGTGGGGCGTCGAGCGCGCGTTCGCCAAGGCTGCGCTCGCGATGCCGCGCGGCTGGCGCCTGTTTGC CGTCGCGTTGTGGATGGGCGTCGTCGCCGGCTTTCCGGAAACCGCGTATCTCAATGGCCTGCTCGCGCTCGCATGGTCGC TCTTGCGCTTATGGCAGGCGCCGGGTTTCAGGCTGGGGTTCATCGTCCGTCTCGCGATCGGCGGCGTAGTCGGGCTGGCG CTTTGCGCGCCGCAAGTCCTTGCCTTCTTCGAGTTCCTGCCGCATGCCTGGCTCGGAGGCCATGACGGAGGCTTCGCCCA TGCCGCGCTCGATCCGGCAGGCGTATTGCCAAGCCTGCTTTTCCCTTATGTGTTCGGTCCGATTGCTGCGGGGGGGTTCG CTTGGGACCGTCTCGGCGCGATCTGGGGTGGCATAGGCGGCTATCTCAGCTTGATCGTCGTTGTCATCGGGCTGTACGGC GCGATGCTGCGACGCACGCCCCTCACGTGGCTGCTGCTGGGCTGGCTGTTCATGGTGCTGGGTAAATCGTTCGGCGTCCC TGTCGTGAGCGCGCTGTGGAACCTGATCCCGGGTGTCTCGCAGGCCGCGTTCTACCGCTATGCGGTGCCGACGTGGGAAT TCGCGTTCATCATTCTGGCGGCGCAGGCAATCGACGATCTGCGTGCACAACAGCGTGAGCAAGCTACCCATCGACGCCAC ATTGCGATCCTGTCCACGGTGTTGCTGATAGCGGGCGTCGTCTATGTGGCGTCCCTGTGGCCTCATCTTCGCGGCTTCGT GCCCGTCCGAAATGCCGCTATCGCGTCCGTCCTGTGGGGCGTGATTTCCGTGGGCGCGCTCGGCGCGATCCTGTGGCGCT GCCGTCCGGCTCGAGCCGCCACGGCGATTGCAGTGCTGCTCATCGTCGACAGTGTGCTAATGTTTTCCATGCCGACGCTG AGCAACCCGCGCTCGGGCGAAGTGGACATGGAAGCACTCGGCTTCCTGCAGAAAAACGTCGGACTGCAACGCATCTATTC GCTTGGTCCGATCCAGGCGAATTACGGCGCCTACTTCGGCATCGCCGCCATCAACCACAACTACTTGCCCATCAACCGGC GCTGGGTTGACTGGGTTCGTGCGAATCTGGATGCCTACGCGGATCCCATCGCCTTCATCGGCAACTATCGGACGGCCGGT TCCGCGGTGCCGACGTCGAGCCAGGAATTGATCCGCAATCTCGAGAACTACGAATGGATCGGCGTCAAATATGTGATCGC GCGCGCCAGCGACAACCCGTTCGTCTCGACGCTCTCGAGCAAGACGGACGCCACGAAGCAATCTCCGCTGCCTGTGATGC CCGGCGAAGCTGTGTCAGGAGTATTGCCTGCCGGTATCACGGACAAACCCGTCACGATCGATCAGATCGGCGTGTCAATC GGTAACTACGGCAACACGTCGGACGACATGCTCATGGCGGAAGTCTGCGTCGACGCCGTTTGCTCCCGCGGACAGCGGGA CCTGAAGGAGTCGAACGACAATTCGATGTTCTATATCCCGTTGTCACGGGCGCTGTCGGTCGATGCACACGCTGTCGTTC GGTACCGGTTTGCGCGCAGCGGCGGCAGCAAGCCTCTCGCGCTGTGGATGGCCGCCGTTCGCGACCCCGCCGACGAGCAG CAACTCACGGGGCCGGCGGGGGTGCAGACGGGTCACGGCTTGCAGATCAAACTGCCGATCCAGGACGGCAAGCCATCGTT GGCCAGGCAGGTGTATGCCGATCAGGTCATGAACATTTTCGAGCTCGGCCAGCCGAAGCCGTACTTCGAAGAGGCGGGTC AGGCGTGCCGCATCACGGCGCACGACCGCGAACACGTGATGGCCGACTGCTCGACTCCGTCCACCCTGCTGCGGCGTGAA TTGTTCTTCCCCGGCTGGACCGCAAAGGTCAACGGTTCGCCGACATCGATTGCTGAACACAGAGACCTGTTCCAGGCCAT TGCTTTGCCCGCAGGCAAAAGCAGCATCGTCTTCGGCTACGAGCCGCCGCATATGATCTGGGCATGGCTTGCCATGCTCG TCGCTTTTGGCATGTTGCTCATGCCCGCCATGAAAAAGAAGTCGCAATAA
Upstream 100 bases:
>100_bases CTGACGCCCCGCCCCACGCGGCCGGGCGCGTTCGGATTCACTCGGGGATTACCTTTTGTCGACGACAATCTGGCGTATTC GGCGGACGGACGCTGTTCCG
Downstream 100 bases:
>100_bases AGGAAACAATAATGAGGCCATGCAAGATCGCAGTACTGATTCCCTGCTACAACGAGGAAGTTGCCATTGGCAAGGTGGTC CGCAACTTCAGGGAAGCGCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 869; Mature: 869
Protein sequence:
>869_residues MLLLFLLPVIAALPGLAGLYHANPMLYLGMLAQHYKPGLTQGMPYVDPNNAFTAQALGYRAALYWLHGTVPWWNYFSGVG LPLAAEYQPAAFFPPTLMLLLPNGMLLQHILLQIIAGWGTYGLLRQLGLSCFAAATGGALFAFNGALAWFDHAPALPVPF LPWMLWGVERAFAKAALAMPRGWRLFAVALWMGVVAGFPETAYLNGLLALAWSLLRLWQAPGFRLGFIVRLAIGGVVGLA LCAPQVLAFFEFLPHAWLGGHDGGFAHAALDPAGVLPSLLFPYVFGPIAAGGFAWDRLGAIWGGIGGYLSLIVVVIGLYG AMLRRTPLTWLLLGWLFMVLGKSFGVPVVSALWNLIPGVSQAAFYRYAVPTWEFAFIILAAQAIDDLRAQQREQATHRRH IAILSTVLLIAGVVYVASLWPHLRGFVPVRNAAIASVLWGVISVGALGAILWRCRPARAATAIAVLLIVDSVLMFSMPTL SNPRSGEVDMEALGFLQKNVGLQRIYSLGPIQANYGAYFGIAAINHNYLPINRRWVDWVRANLDAYADPIAFIGNYRTAG SAVPTSSQELIRNLENYEWIGVKYVIARASDNPFVSTLSSKTDATKQSPLPVMPGEAVSGVLPAGITDKPVTIDQIGVSI GNYGNTSDDMLMAEVCVDAVCSRGQRDLKESNDNSMFYIPLSRALSVDAHAVVRYRFARSGGSKPLALWMAAVRDPADEQ QLTGPAGVQTGHGLQIKLPIQDGKPSLARQVYADQVMNIFELGQPKPYFEEAGQACRITAHDREHVMADCSTPSTLLRRE LFFPGWTAKVNGSPTSIAEHRDLFQAIALPAGKSSIVFGYEPPHMIWAWLAMLVAFGMLLMPAMKKKSQ
Sequences:
>Translated_869_residues MLLLFLLPVIAALPGLAGLYHANPMLYLGMLAQHYKPGLTQGMPYVDPNNAFTAQALGYRAALYWLHGTVPWWNYFSGVG LPLAAEYQPAAFFPPTLMLLLPNGMLLQHILLQIIAGWGTYGLLRQLGLSCFAAATGGALFAFNGALAWFDHAPALPVPF LPWMLWGVERAFAKAALAMPRGWRLFAVALWMGVVAGFPETAYLNGLLALAWSLLRLWQAPGFRLGFIVRLAIGGVVGLA LCAPQVLAFFEFLPHAWLGGHDGGFAHAALDPAGVLPSLLFPYVFGPIAAGGFAWDRLGAIWGGIGGYLSLIVVVIGLYG AMLRRTPLTWLLLGWLFMVLGKSFGVPVVSALWNLIPGVSQAAFYRYAVPTWEFAFIILAAQAIDDLRAQQREQATHRRH IAILSTVLLIAGVVYVASLWPHLRGFVPVRNAAIASVLWGVISVGALGAILWRCRPARAATAIAVLLIVDSVLMFSMPTL SNPRSGEVDMEALGFLQKNVGLQRIYSLGPIQANYGAYFGIAAINHNYLPINRRWVDWVRANLDAYADPIAFIGNYRTAG SAVPTSSQELIRNLENYEWIGVKYVIARASDNPFVSTLSSKTDATKQSPLPVMPGEAVSGVLPAGITDKPVTIDQIGVSI GNYGNTSDDMLMAEVCVDAVCSRGQRDLKESNDNSMFYIPLSRALSVDAHAVVRYRFARSGGSKPLALWMAAVRDPADEQ QLTGPAGVQTGHGLQIKLPIQDGKPSLARQVYADQVMNIFELGQPKPYFEEAGQACRITAHDREHVMADCSTPSTLLRRE LFFPGWTAKVNGSPTSIAEHRDLFQAIALPAGKSSIVFGYEPPHMIWAWLAMLVAFGMLLMPAMKKKSQ >Mature_869_residues MLLLFLLPVIAALPGLAGLYHANPMLYLGMLAQHYKPGLTQGMPYVDPNNAFTAQALGYRAALYWLHGTVPWWNYFSGVG LPLAAEYQPAAFFPPTLMLLLPNGMLLQHILLQIIAGWGTYGLLRQLGLSCFAAATGGALFAFNGALAWFDHAPALPVPF LPWMLWGVERAFAKAALAMPRGWRLFAVALWMGVVAGFPETAYLNGLLALAWSLLRLWQAPGFRLGFIVRLAIGGVVGLA LCAPQVLAFFEFLPHAWLGGHDGGFAHAALDPAGVLPSLLFPYVFGPIAAGGFAWDRLGAIWGGIGGYLSLIVVVIGLYG AMLRRTPLTWLLLGWLFMVLGKSFGVPVVSALWNLIPGVSQAAFYRYAVPTWEFAFIILAAQAIDDLRAQQREQATHRRH IAILSTVLLIAGVVYVASLWPHLRGFVPVRNAAIASVLWGVISVGALGAILWRCRPARAATAIAVLLIVDSVLMFSMPTL SNPRSGEVDMEALGFLQKNVGLQRIYSLGPIQANYGAYFGIAAINHNYLPINRRWVDWVRANLDAYADPIAFIGNYRTAG SAVPTSSQELIRNLENYEWIGVKYVIARASDNPFVSTLSSKTDATKQSPLPVMPGEAVSGVLPAGITDKPVTIDQIGVSI GNYGNTSDDMLMAEVCVDAVCSRGQRDLKESNDNSMFYIPLSRALSVDAHAVVRYRFARSGGSKPLALWMAAVRDPADEQ QLTGPAGVQTGHGLQIKLPIQDGKPSLARQVYADQVMNIFELGQPKPYFEEAGQACRITAHDREHVMADCSTPSTLLRRE LFFPGWTAKVNGSPTSIAEHRDLFQAIALPAGKSSIVFGYEPPHMIWAWLAMLVAFGMLLMPAMKKKSQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 94463; Mature: 94463
Theoretical pI: Translated: 9.06; Mature: 9.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLLFLLPVIAALPGLAGLYHANPMLYLGMLAQHYKPGLTQGMPYVDPNNAFTAQALGYR CHHHHHHHHHHHCCCHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHH AALYWLHGTVPWWNYFSGVGLPLAAEYQPAAFFPPTLMLLLPNGMLLQHILLQIIAGWGT HHHHHHCCCCCHHHHHCCCCCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHCCCH YGLLRQLGLSCFAAATGGALFAFNGALAWFDHAPALPVPFLPWMLWGVERAFAKAALAMP HHHHHHHHHHHHHHHCCCEEEEECCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCC RGWRLFAVALWMGVVAGFPETAYLNGLLALAWSLLRLWQAPGFRLGFIVRLAIGGVVGLA CCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH LCAPQVLAFFEFLPHAWLGGHDGGFAHAALDPAGVLPSLLFPYVFGPIAAGGFAWDRLGA HHHHHHHHHHHHHHHHHCCCCCCCCEECCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHH IWGGIGGYLSLIVVVIGLYGAMLRRTPLTWLLLGWLFMVLGKSFGVPVVSALWNLIPGVS HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCH QAAFYRYAVPTWEFAFIILAAQAIDDLRAQQREQATHRRHIAILSTVLLIAGVVYVASLW HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH PHLRGFVPVRNAAIASVLWGVISVGALGAILWRCRPARAATAIAVLLIVDSVLMFSMPTL HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCC SNPRSGEVDMEALGFLQKNVGLQRIYSLGPIQANYGAYFGIAAINHNYLPINRRWVDWVR CCCCCCCCCHHHHHHHHHHCCHHHHHHCCCCEECCCCEEEEEEECCCCCCCCHHHHHHHH ANLDAYADPIAFIGNYRTAGSAVPTSSQELIRNLENYEWIGVKYVIARASDNPFVSTLSS HHHHHHHCHHHHHCCCCCCCCCCCCCHHHHHHHHCCCEEEEEEEEEEECCCCCHHHHHHC KTDATKQSPLPVMPGEAVSGVLPAGITDKPVTIDQIGVSIGNYGNTSDDMLMAEVCVDAV CCCCCCCCCCCCCCCHHHCCCCCCCCCCCCEEHHHHCCHHCCCCCCCHHHHHHHHHHHHH CSRGQRDLKESNDNSMFYIPLSRALSVDAHAVVRYRFARSGGSKPLALWMAAVRDPADEQ HHCCHHHHHHCCCCCEEEEECHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCHH QLTGPAGVQTGHGLQIKLPIQDGKPSLARQVYADQVMNIFELGQPKPYFEEAGQACRITA HCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCEEEEEE HDREHVMADCSTPSTLLRRELFFPGWTAKVNGSPTSIAEHRDLFQAIALPAGKSSIVFGY CCCHHHEECCCCHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCCCCEEECC EPPHMIWAWLAMLVAFGMLLMPAMKKKSQ CCHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MLLLFLLPVIAALPGLAGLYHANPMLYLGMLAQHYKPGLTQGMPYVDPNNAFTAQALGYR CHHHHHHHHHHHCCCHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHH AALYWLHGTVPWWNYFSGVGLPLAAEYQPAAFFPPTLMLLLPNGMLLQHILLQIIAGWGT HHHHHHCCCCCHHHHHCCCCCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHCCCH YGLLRQLGLSCFAAATGGALFAFNGALAWFDHAPALPVPFLPWMLWGVERAFAKAALAMP HHHHHHHHHHHHHHHCCCEEEEECCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCC RGWRLFAVALWMGVVAGFPETAYLNGLLALAWSLLRLWQAPGFRLGFIVRLAIGGVVGLA CCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH LCAPQVLAFFEFLPHAWLGGHDGGFAHAALDPAGVLPSLLFPYVFGPIAAGGFAWDRLGA HHHHHHHHHHHHHHHHHCCCCCCCCEECCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHH IWGGIGGYLSLIVVVIGLYGAMLRRTPLTWLLLGWLFMVLGKSFGVPVVSALWNLIPGVS HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCH QAAFYRYAVPTWEFAFIILAAQAIDDLRAQQREQATHRRHIAILSTVLLIAGVVYVASLW HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH PHLRGFVPVRNAAIASVLWGVISVGALGAILWRCRPARAATAIAVLLIVDSVLMFSMPTL HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCC SNPRSGEVDMEALGFLQKNVGLQRIYSLGPIQANYGAYFGIAAINHNYLPINRRWVDWVR CCCCCCCCCHHHHHHHHHHCCHHHHHHCCCCEECCCCEEEEEEECCCCCCCCHHHHHHHH ANLDAYADPIAFIGNYRTAGSAVPTSSQELIRNLENYEWIGVKYVIARASDNPFVSTLSS HHHHHHHCHHHHHCCCCCCCCCCCCCHHHHHHHHCCCEEEEEEEEEEECCCCCHHHHHHC KTDATKQSPLPVMPGEAVSGVLPAGITDKPVTIDQIGVSIGNYGNTSDDMLMAEVCVDAV CCCCCCCCCCCCCCCHHHCCCCCCCCCCCCEEHHHHCCHHCCCCCCCHHHHHHHHHHHHH CSRGQRDLKESNDNSMFYIPLSRALSVDAHAVVRYRFARSGGSKPLALWMAAVRDPADEQ HHCCHHHHHHCCCCCEEEEECHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCHH QLTGPAGVQTGHGLQIKLPIQDGKPSLARQVYADQVMNIFELGQPKPYFEEAGQACRITA HCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCEEEEEE HDREHVMADCSTPSTLLRRELFFPGWTAKVNGSPTSIAEHRDLFQAIALPAGKSSIVFGY CCCHHHEECCCCHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCCCCEEECC EPPHMIWAWLAMLVAFGMLLMPAMKKKSQ CCHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA