| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is 186477033
Identifier: 186477033
GI number: 186477033
Start: 2556868
End: 2557929
Strand: Reverse
Name: 186477033
Synonym: Bphy_2282
Alternate gene names: NA
Gene position: 2557929-2556868 (Counterclockwise)
Preceding gene: 186477038
Following gene: 186477018
Centisome position: 73.52
GC content: 59.51
Gene sequence:
>1062_bases ATGCTCAAAAGACGTCAGTTTCTCGGTTGCCTGACGGCGCTCAGCGGCACCTATGTTCTCGGCGGATGCGGGGGCGGCGG TTCAGACGCTGGCGCGGGTAACAACGATGCGCACGTCGTCACGGCCGCAAGTTCGGGCACGTTTTACGGTATCAACGGAC ACTACGACTATCGATACACGCCTGCCCAGATCGTCACGATCATCAAACGCATCGGCTGCTCGACGTATCGGCTGGGCTGC ACGGACGACCCGACGCAGCTGAACGCCGTCATAAAACTCGCGCAGGCATTCCAGGCGGCAGGGCTGACGCTCTTCGTGCT CATTGATCTGAGCATCTATGACAGCAACCGCGTAATGTTCGCGAACGAAACGGTGGCGTACAACCGCGGACGTTCATGTG CGGCAACCGTCGCTGCCGCGCTCGCCCCGTATGGTGTGACGATGTACGAGTGCGGCAATGAACTGACACGCGCAGGCGAC ATCATTCTCGACCCTGCCAACGCAGGCACGAAGGCCGCGGACTTCAACAACACGAACTGGCCTGTGATGCGCGGCATCAT TCGCGGAATGATCGATGGTGTGAAGTCCGCGCAACCCGCGGCGAAGTGCGGCGTCAATTTCACGGTTGCCGATATCGGCG CATCGGACGCACTGTGGAACGGCATGCAGCCCGATGGTTCGAGCGGTCATCCGACCGTACGTTGGGACATGACGACATGG CACAACTTCGAAGTCTATGGCGACATCCTCAACATCGGCTCCGACGGGGCTGGCCCAAGGTTCGATCTGCCTGCCTACTG CCAGGCGCACTATGGTGTGCCGTTCCTGCTCACCGAGTGGAACACGGGCCCCGAAAAGACGCAGGACTATCGGGCGACTT ATATCAGTACGCGGCTTGCCAGTTATTTCGCGGCCAGAAAGTCGAAGAACATCCAGTCGGTGATGTACTACGAGCTCGAT AGCGGAGACGAGACCTTCGGCCTGATGATTGACGGCAGCCTGTTGAAGCAACCATACGATGCCTTCACGAGTTTCATCGC GGGGCACCCTGACACTGCCTGA
Upstream 100 bases:
>100_bases AGCCTGCGCGGCCAACGGACGCCCCGGGTGCTGATCCTGCGAATGTGCTCCCGCCCGTCTCCACAATCTGTTGCCAGCAA TGCGGCAGTGGAGAAATCAC
Downstream 100 bases:
>100_bases CTAACCGTTTCGCGGCATTCGGCAATGCTGTTGATCTGACCGGCGGCGTGGAGCCGGGCAGCCATCGACTCGCACCGTAT CTGTTCCGCTTACCTCACAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 353; Mature: 353
Protein sequence:
>353_residues MLKRRQFLGCLTALSGTYVLGGCGGGGSDAGAGNNDAHVVTAASSGTFYGINGHYDYRYTPAQIVTIIKRIGCSTYRLGC TDDPTQLNAVIKLAQAFQAAGLTLFVLIDLSIYDSNRVMFANETVAYNRGRSCAATVAAALAPYGVTMYECGNELTRAGD IILDPANAGTKAADFNNTNWPVMRGIIRGMIDGVKSAQPAAKCGVNFTVADIGASDALWNGMQPDGSSGHPTVRWDMTTW HNFEVYGDILNIGSDGAGPRFDLPAYCQAHYGVPFLLTEWNTGPEKTQDYRATYISTRLASYFAARKSKNIQSVMYYELD SGDETFGLMIDGSLLKQPYDAFTSFIAGHPDTA
Sequences:
>Translated_353_residues MLKRRQFLGCLTALSGTYVLGGCGGGGSDAGAGNNDAHVVTAASSGTFYGINGHYDYRYTPAQIVTIIKRIGCSTYRLGC TDDPTQLNAVIKLAQAFQAAGLTLFVLIDLSIYDSNRVMFANETVAYNRGRSCAATVAAALAPYGVTMYECGNELTRAGD IILDPANAGTKAADFNNTNWPVMRGIIRGMIDGVKSAQPAAKCGVNFTVADIGASDALWNGMQPDGSSGHPTVRWDMTTW HNFEVYGDILNIGSDGAGPRFDLPAYCQAHYGVPFLLTEWNTGPEKTQDYRATYISTRLASYFAARKSKNIQSVMYYELD SGDETFGLMIDGSLLKQPYDAFTSFIAGHPDTA >Mature_353_residues MLKRRQFLGCLTALSGTYVLGGCGGGGSDAGAGNNDAHVVTAASSGTFYGINGHYDYRYTPAQIVTIIKRIGCSTYRLGC TDDPTQLNAVIKLAQAFQAAGLTLFVLIDLSIYDSNRVMFANETVAYNRGRSCAATVAAALAPYGVTMYECGNELTRAGD IILDPANAGTKAADFNNTNWPVMRGIIRGMIDGVKSAQPAAKCGVNFTVADIGASDALWNGMQPDGSSGHPTVRWDMTTW HNFEVYGDILNIGSDGAGPRFDLPAYCQAHYGVPFLLTEWNTGPEKTQDYRATYISTRLASYFAARKSKNIQSVMYYELD SGDETFGLMIDGSLLKQPYDAFTSFIAGHPDTA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37926; Mature: 37926
Theoretical pI: Translated: 5.61; Mature: 5.61
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKRRQFLGCLTALSGTYVLGGCGGGGSDAGAGNNDAHVVTAASSGTFYGINGHYDYRYT CCCHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCEEEEEECCCEEEEECCEECEEEC PAQIVTIIKRIGCSTYRLGCTDDPTQLNAVIKLAQAFQAAGLTLFVLIDLSIYDSNRVMF HHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHHHCCEEEEEEEEEEEECCCEEEE ANETVAYNRGRSCAATVAAALAPYGVTMYECGNELTRAGDIILDPANAGTKAADFNNTNW ECCEEEECCCCHHHHHHHHHHHCCCEEHHHHCCHHHHCCCEEEECCCCCCCCCCCCCCCC PVMRGIIRGMIDGVKSAQPAAKCGVNFTVADIGASDALWNGMQPDGSSGHPTVRWDMTTW HHHHHHHHHHHHHHCCCCCHHHCCCEEEEEECCCCHHHHCCCCCCCCCCCCEEEEECCEE HNFEVYGDILNIGSDGAGPRFDLPAYCQAHYGVPFLLTEWNTGPEKTQDYRATYISTRLA CCEEEEEEEEECCCCCCCCCCCCCHHHHHCCCCCEEEEECCCCCCCCHHHHHHHHHHHHH SYFAARKSKNIQSVMYYELDSGDETFGLMIDGSLLKQPYDAFTSFIAGHPDTA HHHHHHHCCCCEEEEEEEECCCCCEEEEEECCHHHHCHHHHHHHHHCCCCCCC >Mature Secondary Structure MLKRRQFLGCLTALSGTYVLGGCGGGGSDAGAGNNDAHVVTAASSGTFYGINGHYDYRYT CCCHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCEEEEEECCCEEEEECCEECEEEC PAQIVTIIKRIGCSTYRLGCTDDPTQLNAVIKLAQAFQAAGLTLFVLIDLSIYDSNRVMF HHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHHHCCEEEEEEEEEEEECCCEEEE ANETVAYNRGRSCAATVAAALAPYGVTMYECGNELTRAGDIILDPANAGTKAADFNNTNW ECCEEEECCCCHHHHHHHHHHHCCCEEHHHHCCHHHHCCCEEEECCCCCCCCCCCCCCCC PVMRGIIRGMIDGVKSAQPAAKCGVNFTVADIGASDALWNGMQPDGSSGHPTVRWDMTTW HHHHHHHHHHHHHHCCCCCHHHCCCEEEEEECCCCHHHHCCCCCCCCCCCCEEEEECCEE HNFEVYGDILNIGSDGAGPRFDLPAYCQAHYGVPFLLTEWNTGPEKTQDYRATYISTRLA CCEEEEEEEEECCCCCCCCCCCCCHHHHHCCCCCEEEEECCCCCCCCHHHHHHHHHHHHH SYFAARKSKNIQSVMYYELDSGDETFGLMIDGSLLKQPYDAFTSFIAGHPDTA HHHHHHHCCCCEEEEEEEECCCCCEEEEEECCHHHHCHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA