| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is 186477031
Identifier: 186477031
GI number: 186477031
Start: 2555175
End: 2555543
Strand: Direct
Name: 186477031
Synonym: Bphy_2280
Alternate gene names: NA
Gene position: 2555175-2555543 (Clockwise)
Preceding gene: 186477030
Following gene: 186477032
Centisome position: 73.44
GC content: 63.41
Gene sequence:
>369_bases GTGATACGCACGCGCCGCTATCGACGTGCATGGCGCACCGATCCCGTCGAGCCAGCGCTGCGCGCTTCCCAGCGAATCTT CGTGTTCCCATCGCCGGCTCGCCCGGTTGTTGTCGCCGGCCGTTCGCGCTATCTGCCATTTCCCTGCGCCGCGGTATTGC CAGACGCTTTCAATCCGCTGTCGAGGTTCGTCCAATCTCACTGGTTGCGTAAGCAGCTATCTGTCCGTGTCGGGCGAATT TGCCACTCGGGCGTCCGTACGGCACCGAACGGTAGTGTCTCCGCGCAAATACTACCATCCGCCAATGGGCCGTCGCGCGC TGCCATTCGTGTGCTGTTTGCCGCTTCACCGCCCGGAACCAGGCGCTGA
Upstream 100 bases:
>100_bases TGATTTCGGCGCTGCGTAGCAACGGCATGTTGCCCGCCGAACCGGATGCGGGTGGCGCCGATCTGTCAGACGCAGACGCG ATCGGTTAAGTCATCCACCG
Downstream 100 bases:
>100_bases TTCGACTTCGATACGCTCCACGTTCGTATCTTTGAGTACCTCGATCGCACGACAGATCCGTCCCCGGTGACCGAGCCAAG CGGAAGCAGCGATGCACGAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 122; Mature: 122
Protein sequence:
>122_residues MIRTRRYRRAWRTDPVEPALRASQRIFVFPSPARPVVVAGRSRYLPFPCAAVLPDAFNPLSRFVQSHWLRKQLSVRVGRI CHSGVRTAPNGSVSAQILPSANGPSRAAIRVLFAASPPGTRR
Sequences:
>Translated_122_residues MIRTRRYRRAWRTDPVEPALRASQRIFVFPSPARPVVVAGRSRYLPFPCAAVLPDAFNPLSRFVQSHWLRKQLSVRVGRI CHSGVRTAPNGSVSAQILPSANGPSRAAIRVLFAASPPGTRR >Mature_122_residues MIRTRRYRRAWRTDPVEPALRASQRIFVFPSPARPVVVAGRSRYLPFPCAAVLPDAFNPLSRFVQSHWLRKQLSVRVGRI CHSGVRTAPNGSVSAQILPSANGPSRAAIRVLFAASPPGTRR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13556; Mature: 13556
Theoretical pI: Translated: 12.68; Mature: 12.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIRTRRYRRAWRTDPVEPALRASQRIFVFPSPARPVVVAGRSRYLPFPCAAVLPDAFNPL CCCCHHHHHHHCCCCCCHHHHCCCEEEEECCCCCCEEEECCCCCCCCCHHHHCCCCCCHH SRFVQSHWLRKQLSVRVGRICHSGVRTAPNGSVSAQILPSANGPSRAAIRVLFAASPPGT HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCEEEEEEEECCCCCC RR CC >Mature Secondary Structure MIRTRRYRRAWRTDPVEPALRASQRIFVFPSPARPVVVAGRSRYLPFPCAAVLPDAFNPL CCCCHHHHHHHCCCCCCHHHHCCCEEEEECCCCCCEEEECCCCCCCCCHHHHCCCCCCHH SRFVQSHWLRKQLSVRVGRICHSGVRTAPNGSVSAQILPSANGPSRAAIRVLFAASPPGT HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCEEEEEEEECCCCCC RR CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA