| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is 186477029
Identifier: 186477029
GI number: 186477029
Start: 2554050
End: 2554253
Strand: Direct
Name: 186477029
Synonym: Bphy_2278
Alternate gene names: NA
Gene position: 2554050-2554253 (Clockwise)
Preceding gene: 186477028
Following gene: 186477030
Centisome position: 73.41
GC content: 58.33
Gene sequence:
>204_bases ATGCGGATGCCGGTGCTTAAGCGTTTCGCGAATCCCGACGTCACACGCGCTGTCGCAAACCTTGTCTGGCTTGGGCTCGA GCGCCTGACGCAGATCGACGTAGCGATTGTGACCAGCGGCGTGCTGGCGCGTTATTTCGGCCCCGACCTCTTCGGCAAAT GGCAATACGTCAATACGCTTTTGCTCAATGTCGACCGTAGCTAG
Upstream 100 bases:
>100_bases CGCCTAGACGCCCCGCGCTCATACAGTCGCCGCATCGGTCGGGCACGCCAATTTCAGGACTACATGCACCTCCCGTGCCC GCCGCGTGCGTCCGGACATC
Downstream 100 bases:
>100_bases CGCAGACGCGGATCGGCATCGCCGGAGGCGTCACGGCCCGCCGTCGATGAAATGCTTGCCAGCCTCCCCGTGACGATGCT GTTCCGCGAACCGTTCGTCG
Product: PST family polysaccharide export protein
Products: NA
Alternate protein names: Oligosaccharide Translocase; PST Family Polysaccharide Export Protein
Number of amino acids: Translated: 67; Mature: 67
Protein sequence:
>67_residues MRMPVLKRFANPDVTRAVANLVWLGLERLTQIDVAIVTSGVLARYFGPDLFGKWQYVNTLLLNVDRS
Sequences:
>Translated_67_residues MRMPVLKRFANPDVTRAVANLVWLGLERLTQIDVAIVTSGVLARYFGPDLFGKWQYVNTLLLNVDRS >Mature_67_residues MRMPVLKRFANPDVTRAVANLVWLGLERLTQIDVAIVTSGVLARYFGPDLFGKWQYVNTLLLNVDRS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7620; Mature: 7620
Theoretical pI: Translated: 10.43; Mature: 10.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRMPVLKRFANPDVTRAVANLVWLGLERLTQIDVAIVTSGVLARYFGPDLFGKWQYVNTL CCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH LLNVDRS HHCCCCC >Mature Secondary Structure MRMPVLKRFANPDVTRAVANLVWLGLERLTQIDVAIVTSGVLARYFGPDLFGKWQYVNTL CCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH LLNVDRS HHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA