Definition Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence.
Accession NC_010622
Length 3,479,187

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The map label for this gene is 186477019

Identifier: 186477019

GI number: 186477019

Start: 2542149

End: 2543411

Strand: Direct

Name: 186477019

Synonym: Bphy_2268

Alternate gene names: NA

Gene position: 2542149-2543411 (Clockwise)

Preceding gene: 186477014

Following gene: 186477020

Centisome position: 73.07

GC content: 64.45

Gene sequence:

>1263_bases
ATGCCGGTGCTTAAGCGTTTCGCGAATCCCGACGTCACACGCGCTGTCGCAAACCTTGTCTGGCTTGGGCTCGAGCGCCT
GACGCAGATCGGCGTAGCGATCGCGACCAGCGGCGTGCTGGCCCGTTATTTCGGCCCCGACGTGTTCGGCAAATGGCAAT
ACGCCAATACGCTTTTGCTCGTCCTGTCGCCGATTACATGGGTCTGCGGCGCCGAGATTCTCGTGCCGACCATCGTCCAT
CGTCCGGCCGCACAGCTCGGCACCGTGCTCGGCAGCGCATTCGCGCTGCGCCTGTCGGTGTCGGCCGTGGCGCTGGCGCT
GACGTGGGCCGGTATCGCCGCGGGCCTCACCGATCCCGTCGTCGGTGCGATGCTCGCCGGCCTCGCCGTGACGATGCTGT
TCCGCGAGCCGTTCGTCGGTGTCATTAACGCGTGGCTGCAAAGCATGACGTACAGCAAGCCGCAATTGCTCACGAGCATG
ACGACGGCCATCGCCAAGGCGCTGCTCGTCTGGCTGCTGGTGCGCGCCGCCGCCGCGCCCGCGCGCTTCGGCTGGCTGTG
GGCGCTCGAATCCGCCGTGATTGGCGCAGTGCTGGTCGTCTATTACATGCGGCGCCACGGCGGCAAGCTCGGCTGGCGCA
TCGACCGCACGCTCTTTCGCCATTTCGCGACGGCGGGCGCGGTGTTCTGGCTCGGCCTGATCTGCATGTATCTGTTCCTC
AAGCTCGACCGGCTGATGCTGGAACGCGCGATTTCATTCGCCGACCTCGGCCGCTATTCCGCCGCACAACAGCTGAACGA
AAACTGGATCACGCTGGCGCTGATGCTGGCGCAAACGCTTGCGCCAGCATTCGTCTACCGCGTTCAGGACGCCGCGCAAC
TGCGCCACAATATGTGGCGGCTCACGGCGATGACGGCGGTGCTGATGATCGCGGGCGCATTCGTGCTGGATCTGCTTGCG
GGGTTCATCATCCGCCGCGTGTTCGGGCCGAACTTCGAAGAGGCCGTCGACATCTTCCGCTGGGCCGTTTGGCTATCCGT
GCCCGCGGGCATCGAGGCGATCGGCAATCTGGTCGTCCTCAAATATCAGGCGAAGTTCGTGTTGCTGTCGAAATGGCTGC
TCGCGCTCGCCGTCGCGTGCGTCGTCAATCTGCTGGCGATTCCCCGTTTCGGCGCGTATGGCGCGTTGATCGGACTCGCG
TGCGGCTATCTGGCCGCGGCCTCCGTCAACATTTACTACATCCGTTACAAGCTGCGTCCATGA

Upstream 100 bases:

>100_bases
GCGCTCACAAAGTCGCCGCATCGTAAGATCGGCTGGGCACGCCAATTTCAAGACTACACGCACCTCCCGTGCCCGCCGCG
TGCGTCCCGACATCATGCGG

Downstream 100 bases:

>100_bases
CGTTTTCCCCACTCACGCAGCCTTTGGCCGGCGCACTCGACGACGTCGCCGTCCTCATGCCCGCATACAACGGCCAGACC
GACGTCGACCGCACGCTCGC

Product: polysaccharide biosynthesis protein

Products: NA

Alternate protein names: Lipopolysaccharide Biosynthesis Protein; O-Antigen Export Protein; Oligosaccharide Translocase; PST Family Polysaccharide Export Protein

Number of amino acids: Translated: 420; Mature: 419

Protein sequence:

>420_residues
MPVLKRFANPDVTRAVANLVWLGLERLTQIGVAIATSGVLARYFGPDVFGKWQYANTLLLVLSPITWVCGAEILVPTIVH
RPAAQLGTVLGSAFALRLSVSAVALALTWAGIAAGLTDPVVGAMLAGLAVTMLFREPFVGVINAWLQSMTYSKPQLLTSM
TTAIAKALLVWLLVRAAAAPARFGWLWALESAVIGAVLVVYYMRRHGGKLGWRIDRTLFRHFATAGAVFWLGLICMYLFL
KLDRLMLERAISFADLGRYSAAQQLNENWITLALMLAQTLAPAFVYRVQDAAQLRHNMWRLTAMTAVLMIAGAFVLDLLA
GFIIRRVFGPNFEEAVDIFRWAVWLSVPAGIEAIGNLVVLKYQAKFVLLSKWLLALAVACVVNLLAIPRFGAYGALIGLA
CGYLAAASVNIYYIRYKLRP

Sequences:

>Translated_420_residues
MPVLKRFANPDVTRAVANLVWLGLERLTQIGVAIATSGVLARYFGPDVFGKWQYANTLLLVLSPITWVCGAEILVPTIVH
RPAAQLGTVLGSAFALRLSVSAVALALTWAGIAAGLTDPVVGAMLAGLAVTMLFREPFVGVINAWLQSMTYSKPQLLTSM
TTAIAKALLVWLLVRAAAAPARFGWLWALESAVIGAVLVVYYMRRHGGKLGWRIDRTLFRHFATAGAVFWLGLICMYLFL
KLDRLMLERAISFADLGRYSAAQQLNENWITLALMLAQTLAPAFVYRVQDAAQLRHNMWRLTAMTAVLMIAGAFVLDLLA
GFIIRRVFGPNFEEAVDIFRWAVWLSVPAGIEAIGNLVVLKYQAKFVLLSKWLLALAVACVVNLLAIPRFGAYGALIGLA
CGYLAAASVNIYYIRYKLRP
>Mature_419_residues
PVLKRFANPDVTRAVANLVWLGLERLTQIGVAIATSGVLARYFGPDVFGKWQYANTLLLVLSPITWVCGAEILVPTIVHR
PAAQLGTVLGSAFALRLSVSAVALALTWAGIAAGLTDPVVGAMLAGLAVTMLFREPFVGVINAWLQSMTYSKPQLLTSMT
TAIAKALLVWLLVRAAAAPARFGWLWALESAVIGAVLVVYYMRRHGGKLGWRIDRTLFRHFATAGAVFWLGLICMYLFLK
LDRLMLERAISFADLGRYSAAQQLNENWITLALMLAQTLAPAFVYRVQDAAQLRHNMWRLTAMTAVLMIAGAFVLDLLAG
FIIRRVFGPNFEEAVDIFRWAVWLSVPAGIEAIGNLVVLKYQAKFVLLSKWLLALAVACVVNLLAIPRFGAYGALIGLAC
GYLAAASVNIYYIRYKLRP

Specific function: Unknown

COG id: COG2244

COG function: function code R; Membrane protein involved in the export of O-antigen and teichoic acid

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46017; Mature: 45885

Theoretical pI: Translated: 10.46; Mature: 10.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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>Mature Secondary Structure 
PVLKRFANPDVTRAVANLVWLGLERLTQIGVAIATSGVLARYFGPDVFGKWQYANTLLL
CCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH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PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA