Definition Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence.
Accession NC_010622
Length 3,479,187

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The map label for this gene is ureB

Identifier: 186477010

GI number: 186477010

Start: 2532424

End: 2532729

Strand: Direct

Name: ureB

Synonym: Bphy_2259

Alternate gene names: 186477010

Gene position: 2532424-2532729 (Clockwise)

Preceding gene: 186477009

Following gene: 186477011

Centisome position: 72.79

GC content: 64.38

Gene sequence:

>306_bases
ATGATCCCAGGCGAACTGATTACCGACGACGGCGAACTCGAACTCAACGCGGGGCGTGCGACCGTCACGGTCACGGTATC
GAACACGGGCGATCGTCCCGTGCAGGTCGGCTCGCACTACCACTTCTACGAAGTCAACGCGGCACTGTCGTTCGACCGCG
AAGCTGCGCGCGGCTTCCGCCTGAACATTGCGGCAGGCACCGCCGTGCGCTTCGAGCCGGGCCAGGAACGCACGGTCGAA
CTCGTCGCGCTGGCGGGCGATCGCGTCGTCTATGGCTTCAATGGCAAGGTGATGGGCAAGCTGTGA

Upstream 100 bases:

>100_bases
GGCGTGCCCGAGATGATTCCCGATATCCAGGTCGAAGCCACCTTCCCCGACGGCACGAAGCTCGTGACCGTCCATCACCC
CATTCCGTGACGAGGCGCGC

Downstream 100 bases:

>100_bases
TCGCTGCGCATTCGCGGGCCTGCTCGCGTGCAAATTCACGGGCAAGTTCGCGGGCAAATTCGCGGGCATATTCAGGAACC
TCTCAAACATGACATTACGC

Product: urease subunit beta

Products: NA

Alternate protein names: Urea amidohydrolase subunit beta

Number of amino acids: Translated: 101; Mature: 101

Protein sequence:

>101_residues
MIPGELITDDGELELNAGRATVTVTVSNTGDRPVQVGSHYHFYEVNAALSFDREAARGFRLNIAAGTAVRFEPGQERTVE
LVALAGDRVVYGFNGKVMGKL

Sequences:

>Translated_101_residues
MIPGELITDDGELELNAGRATVTVTVSNTGDRPVQVGSHYHFYEVNAALSFDREAARGFRLNIAAGTAVRFEPGQERTVE
LVALAGDRVVYGFNGKVMGKL
>Mature_101_residues
MIPGELITDDGELELNAGRATVTVTVSNTGDRPVQVGSHYHFYEVNAALSFDREAARGFRLNIAAGTAVRFEPGQERTVE
LVALAGDRVVYGFNGKVMGKL

Specific function: Unknown

COG id: COG0832

COG function: function code E; Urea amidohydrolase (urease) beta subunit

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the urease beta subunit family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): URE2_BURP8 (B2JF66)

Other databases:

- EMBL:   CP001043
- RefSeq:   YP_001858480.1
- ProteinModelPortal:   B2JF66
- SMR:   B2JF66
- GeneID:   6243745
- GenomeReviews:   CP001043_GR
- KEGG:   bph:Bphy_2259
- HOGENOM:   HBG365918
- OMA:   RIVYGFN
- GO:   GO:0005737
- HAMAP:   MF_01954
- InterPro:   IPR002019
- Gene3D:   G3DSA:2.10.150.10
- TIGRFAMs:   TIGR00192

Pfam domain/function: PF00699 Urease_beta; SSF51278 Urease_beta

EC number: =3.5.1.5

Molecular weight: Translated: 10882; Mature: 10882

Theoretical pI: Translated: 5.09; Mature: 5.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIPGELITDDGELELNAGRATVTVTVSNTGDRPVQVGSHYHFYEVNAALSFDREAARGFR
CCCCCEEECCCCEEEECCCEEEEEEEECCCCCCEEECCEEEEEEEEEEEEECCCCCCCEE
LNIAAGTAVRFEPGQERTVELVALAGDRVVYGFNGKVMGKL
EEEECCEEEEECCCCCCEEEEEEEECCEEEEECCCEEEECC
>Mature Secondary Structure
MIPGELITDDGELELNAGRATVTVTVSNTGDRPVQVGSHYHFYEVNAALSFDREAARGFR
CCCCCEEECCCCEEEECCCEEEEEEEECCCCCCEEECCEEEEEEEEEEEEECCCCCCCEE
LNIAAGTAVRFEPGQERTVELVALAGDRVVYGFNGKVMGKL
EEEECCEEEEECCCCCCEEEEEEEECCEEEEECCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA