Definition Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence.
Accession NC_010622
Length 3,479,187

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The map label for this gene is 186476953

Identifier: 186476953

GI number: 186476953

Start: 2476656

End: 2477090

Strand: Reverse

Name: 186476953

Synonym: Bphy_2202

Alternate gene names: NA

Gene position: 2477090-2476656 (Counterclockwise)

Preceding gene: 186476954

Following gene: 186476950

Centisome position: 71.2

GC content: 67.36

Gene sequence:

>435_bases
ATGAACCCGACCGCCAGCAACAAAGCCGATCTTGCCGCCACCATCTTGCGCGTCGCGCTAGGCGTGCTGTACCTCGCGCA
CAGCCTGCAGAAAATCTTCGTCTTCACGCTGCCGGGCACGGCGCAGTTCTTCCAGTCGATCGGCTTTCCGGGCTGGCTCG
GCTATCTGACGGCGTTCGTCGAACTGGCGGGCGGGATCGCGCTGCTGCTCGGCGTGCAGGTCCGCTGGGTCGCGCTTGTG
CTGGTGCCGTTCATGCTCGGCGCGCTGTCCGTGCATCTGCCGAACGGCTGGGGCTTCGCGGCGCCGCACGGCGGCTGGGA
ATATCCGGCGTTTTGGGCCGTCACGCTCGTCGTGCAGTCGCTGCTCGGCAATGGCCTGTTTGCGGTGAGCGGCGCCAAGG
CGGCGTCCGTCGCCCAGGTTCGCAACGCTGCCTGA

Upstream 100 bases:

>100_bases
TAAGTCATTCAGGCGATTTTTCGACCGCTACGGTTCGAATACAGTCCGTTCCATCGACGACGCAGCCCGCGCCGTCAAAC
CCGATCATCGAGGAACCGAC

Downstream 100 bases:

>100_bases
TCTGCATGGCAGGCGGGTGAACGGGGCCTGGGCCCCTGGGTCGCCCGCCTGGTCGCTTCAGCCTGAGGACTTCCGCGCGA
TCACTTTTGCCACTGCCGTA

Product: DoxX family protein

Products: NA

Alternate protein names: DoxD-Like Family Protein; DoxX Family; Transmembrane Protein; Catechol-2 3-Dioxygenase Membrane Subunit; Oxidoreductase CatD; DoxD-Like Protein; Surfeit Locus 4-Related

Number of amino acids: Translated: 144; Mature: 144

Protein sequence:

>144_residues
MNPTASNKADLAATILRVALGVLYLAHSLQKIFVFTLPGTAQFFQSIGFPGWLGYLTAFVELAGGIALLLGVQVRWVALV
LVPFMLGALSVHLPNGWGFAAPHGGWEYPAFWAVTLVVQSLLGNGLFAVSGAKAASVAQVRNAA

Sequences:

>Translated_144_residues
MNPTASNKADLAATILRVALGVLYLAHSLQKIFVFTLPGTAQFFQSIGFPGWLGYLTAFVELAGGIALLLGVQVRWVALV
LVPFMLGALSVHLPNGWGFAAPHGGWEYPAFWAVTLVVQSLLGNGLFAVSGAKAASVAQVRNAA
>Mature_144_residues
MNPTASNKADLAATILRVALGVLYLAHSLQKIFVFTLPGTAQFFQSIGFPGWLGYLTAFVELAGGIALLLGVQVRWVALV
LVPFMLGALSVHLPNGWGFAAPHGGWEYPAFWAVTLVVQSLLGNGLFAVSGAKAASVAQVRNAA

Specific function: Unknown

COG id: COG2259

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15122; Mature: 15122

Theoretical pI: Translated: 10.11; Mature: 10.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNPTASNKADLAATILRVALGVLYLAHSLQKIFVFTLPGTAQFFQSIGFPGWLGYLTAFV
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCHHHHHHHCCCCHHHHHHHHHH
ELAGGIALLLGVQVRWVALVLVPFMLGALSVHLPNGWGFAAPHGGWEYPAFWAVTLVVQS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
LLGNGLFAVSGAKAASVAQVRNAA
HHCCCEEEECCCCHHHHHHHHCCC
>Mature Secondary Structure
MNPTASNKADLAATILRVALGVLYLAHSLQKIFVFTLPGTAQFFQSIGFPGWLGYLTAFV
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCHHHHHHHCCCCHHHHHHHHHH
ELAGGIALLLGVQVRWVALVLVPFMLGALSVHLPNGWGFAAPHGGWEYPAFWAVTLVVQS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
LLGNGLFAVSGAKAASVAQVRNAA
HHCCCEEEECCCCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA