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The map label for this gene is yafE [H]

Identifier: 186476932

GI number: 186476932

Start: 2447982

End: 2448734

Strand: Reverse

Name: yafE [H]

Synonym: Bphy_2181

Alternate gene names: 186476932

Gene position: 2448734-2447982 (Counterclockwise)

Preceding gene: 186476936

Following gene: 186476930

Centisome position: 70.38

GC content: 63.48

Gene sequence:

>753_bases
ATGAAGCATCACGATCAGGTGGCCGATGCATTCGGCTCGACGGCAGCCGCGTATTTGACGAGCCAGGTGCACGCGACGGG
GGCGGACTTGCAGACGCTGGCGGCGTCGGTGGCCGCGACGCCGGGGGCGGCCGTGCTCGACCTCGGTTGCGGCGCGGGGC
ATGCCAGTTTTGCGGTCGCGCCGCATGCGGCGTCCGTCGTTGCTTACGACATTGCGCCGCAGATGCTGGCGACGGTTGCC
GGTGCCGCTGTCGAGCGCGGGTTGTCGAATATCCGTACGCAGCACGGTGCGGCAGAGAAATTGCCGTTCGCGGATGCATC
GTTCGACTGGGGGATCAGCCGGATGAGCGCGCATCACTGGCACGACGTGCCGCGGGCGCTCGTCGAAGTGCGCCGCGTAT
TGAAGCCGGGCGGGCGCGTGCTGTTCATCGATATCGCCGGGAGCGATCATCCGTTGCTCGATACGCATCTGCAGGCAGTC
GAACTGTTGCGCGATGGCTCGCATATTCGCGATTATCGCGGGGATGAGTGGGTTTCTTTTTTTGTTGCCGCGGGCTTTGA
GGCTGTTGTGCGCGAGCGCTGGCGGCTGGGAATCGAGTTTGGCTCGTGGGTGGAGAGGATGAAGACACCGGAGACACGTG
TCGCCGCTATTCGGTCTTTGTGGGCTTGCGCGCCGGACGAGGTTCGGGAGTATTTTGACGTGTTGCCAGACAGCTCTTTT
AAGCTCGACGCCTTGATGGTAGAGGCATGGTGA

Upstream 100 bases:

>100_bases
GGCTCTATTGTAGCGACATGAACGGCGCGTGCGAACAGGCGGGCCGCTTCGGGAATTCGACATCACTTCATGCACAACCC
AGAAAGGGCGGGAGCACACG

Downstream 100 bases:

>100_bases
CCGCGTTTTGCATGCGGCGCGGCGTTGCCGGGTTTTTCGCGGGCATCCGCGTTTGCCTCTGGTTTGCCGCCCCGGACAGG
GGCGACGCATGAAGTACGAA

Product: type 11 methyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 250; Mature: 250

Protein sequence:

>250_residues
MKHHDQVADAFGSTAAAYLTSQVHATGADLQTLAASVAATPGAAVLDLGCGAGHASFAVAPHAASVVAYDIAPQMLATVA
GAAVERGLSNIRTQHGAAEKLPFADASFDWGISRMSAHHWHDVPRALVEVRRVLKPGGRVLFIDIAGSDHPLLDTHLQAV
ELLRDGSHIRDYRGDEWVSFFVAAGFEAVVRERWRLGIEFGSWVERMKTPETRVAAIRSLWACAPDEVREYFDVLPDSSF
KLDALMVEAW

Sequences:

>Translated_250_residues
MKHHDQVADAFGSTAAAYLTSQVHATGADLQTLAASVAATPGAAVLDLGCGAGHASFAVAPHAASVVAYDIAPQMLATVA
GAAVERGLSNIRTQHGAAEKLPFADASFDWGISRMSAHHWHDVPRALVEVRRVLKPGGRVLFIDIAGSDHPLLDTHLQAV
ELLRDGSHIRDYRGDEWVSFFVAAGFEAVVRERWRLGIEFGSWVERMKTPETRVAAIRSLWACAPDEVREYFDVLPDSSF
KLDALMVEAW
>Mature_250_residues
MKHHDQVADAFGSTAAAYLTSQVHATGADLQTLAASVAATPGAAVLDLGCGAGHASFAVAPHAASVVAYDIAPQMLATVA
GAAVERGLSNIRTQHGAAEKLPFADASFDWGISRMSAHHWHDVPRALVEVRRVLKPGGRVLFIDIAGSDHPLLDTHLQAV
ELLRDGSHIRDYRGDEWVSFFVAAGFEAVVRERWRLGIEFGSWVERMKTPETRVAAIRSLWACAPDEVREYFDVLPDSSF
KLDALMVEAW

Specific function: Unknown

COG id: COG0500

COG function: function code QR; SAM-dependent methyltransferases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily [H]

Homologues:

Organism=Escherichia coli, GI1786404, Length=201, Percent_Identity=48.2587064676617, Blast_Score=182, Evalue=1e-47,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013216 [H]

Pfam domain/function: PF08241 Methyltransf_11 [H]

EC number: NA

Molecular weight: Translated: 27079; Mature: 27079

Theoretical pI: Translated: 6.07; Mature: 6.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKHHDQVADAFGSTAAAYLTSQVHATGADLQTLAASVAATPGAAVLDLGCGAGHASFAVA
CCCHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCEEECCCCCCCCCEEEC
PHAASVVAYDIAPQMLATVAGAAVERGLSNIRTQHGAAEKLPFADASFDWGISRMSAHHW
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCCCCHHHHHHHHH
HDVPRALVEVRRVLKPGGRVLFIDIAGSDHPLLDTHLQAVELLRDGSHIRDYRGDEWVSF
HHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCHHHHCCCHHHHHH
FVAAGFEAVVRERWRLGIEFGSWVERMKTPETRVAAIRSLWACAPDEVREYFDVLPDSSF
HHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHCCCCCC
KLDALMVEAW
EEEEEEEECC
>Mature Secondary Structure
MKHHDQVADAFGSTAAAYLTSQVHATGADLQTLAASVAATPGAAVLDLGCGAGHASFAVA
CCCHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCEEECCCCCCCCCEEEC
PHAASVVAYDIAPQMLATVAGAAVERGLSNIRTQHGAAEKLPFADASFDWGISRMSAHHW
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCCCCHHHHHHHHH
HDVPRALVEVRRVLKPGGRVLFIDIAGSDHPLLDTHLQAVELLRDGSHIRDYRGDEWVSF
HHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCHHHHCCCHHHHHH
FVAAGFEAVVRERWRLGIEFGSWVERMKTPETRVAAIRSLWACAPDEVREYFDVLPDSSF
HHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHCCCCCC
KLDALMVEAW
EEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1663890; 9278503 [H]