Definition Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence.
Accession NC_010622
Length 3,479,187

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The map label for this gene is 186476928

Identifier: 186476928

GI number: 186476928

Start: 2440127

End: 2441317

Strand: Reverse

Name: 186476928

Synonym: Bphy_2177

Alternate gene names: NA

Gene position: 2441317-2440127 (Counterclockwise)

Preceding gene: 186476929

Following gene: 186476924

Centisome position: 70.17

GC content: 64.06

Gene sequence:

>1191_bases
ATGGCGCTGCGTGGACTTCTCTGGCTCGCATTCCTGTTCGCGATCGCCGTCGTGCTCGCGATCGTCGGGCGCTTCGACAC
GGGGCAGGTGCTGCTCGTCTACCCGCCGTATCGCGTCGACATCTCGCTGAACCTGTTCATCGTCGGCATCATCGTCGCAT
TCATCGTGATCTACGCGTTGTTGCGCATCGTGCGCAACATCTGGCGCATGCCGCAGCGCGTCGCCGCGTACCGTGCGCGC
CAGCGCGTCGCGAAGGCGCACGCGGCCTTGCGCGATGCGATCGGCAATCTGTACGCGGGCCGTTTCTCGCGCGCCGAGAA
GGCAGCCCGCGATTCGCTGGCCAACCCCGACAACAAGGGTGCGGCGGGGCTGATTGCCGCGAACGCCGCGCACCGGATGC
ACGAGTACACGCGCCGCGACGAATATCTCGCGCAGATCGATGCGGCCGACTGGCAGGACGCGCGGCTGATGGCGACGGCC
GACATGCGTGCAGATGGTCGTGATGCCGACGGCGCGCTGCTCGCGCTGACGGAAATGCAATCGCAGGGCGGCCGGCGCAT
TCACGCGCAGCAGATTGCGTTGCGTGCGCAGCAACAGCTGAAGAATTGGGGCGAGGTGTTGAAGCTCGTCAGGACGCTCG
AAAAGCGCGAGGCGATTCATCCCGCCGTGGCTGTGCGTCTGCGTCAGCTGGCGGCCGAGAACCTGCTGCGAGACCGCCGT
CACAATGCCGATGCGCTGCTCGAACTGTGGCACTCGCTGACGCCGACCGAGCGGCATTCGCCGCGTCTCGCGGATTTGGC
GGCGGAATTGCTGGTTGCGCTCAATCGCCCTCAGGAAGCGCGCAAGATCGTCGAGGAAGCGCTTGCGCAGAACTGGGATG
CCCGGTTGTTGCGCCGTTATCCCGATACGACGGGTGGCGATGCGTTGCCGCTGATCCAAAAGGCGGAGGCGTGGCGGAAG
GAGCGTCCCGAGGACGCTGATCTGCTGTTCGCGCTAGGGCGGTTGTGTCTGCATCAGCAGTTGTGGGGGAAGGCGCAGTC
GTTCCTTGAACAGGCGCTTAAGCTCGCCGATAACGAGACGCTGAAAATTCGGTCGCATAGAGCGCTCGCGCGGTTGCACG
AGCAGCTAGGCGATGTTTCAAAGGCTGGCGCGCATTATCGTGAGAGTGCTTTGGCGATGAATATTGTTTAA

Upstream 100 bases:

>100_bases
ACCTCATCAAGCAGATCGACGAAGGCTCGGGCGCCGTCGACGTTCCGAACCTGAATACGAGCCTGCAGGCCGTGCATCAA
TATCGGAACCGGGGTTAATC

Downstream 100 bases:

>100_bases
TGGTTTTTCTGCCTGCGACGCAGTCGGGATCTGGTTTTTTGGCCCTTCGCGCAAAAAAACACAGCGCATCGACAGCACCA
GAAACAAGAAACCCGCCCGC

Product: HemY domain-containing protein

Products: NA

Alternate protein names: HemY Protein; Protein Porphyrin Biosynthesis; HemY Domain-Containing Protein; HemY-Like Protein; HemY-Like; HemY N-Terminal; Protoheme Ix Synthesis Protein; Porphyrin Biosynthesis Protein; HemY N-Terminal Domain Protein; Protoheme IX Synthesis Protein; HemY N-Terminal Domain-Containing Protein; Metal Dependent Phosphohydrolase; HemY Protein N-Terminus Family Protein

Number of amino acids: Translated: 396; Mature: 395

Protein sequence:

>396_residues
MALRGLLWLAFLFAIAVVLAIVGRFDTGQVLLVYPPYRVDISLNLFIVGIIVAFIVIYALLRIVRNIWRMPQRVAAYRAR
QRVAKAHAALRDAIGNLYAGRFSRAEKAARDSLANPDNKGAAGLIAANAAHRMHEYTRRDEYLAQIDAADWQDARLMATA
DMRADGRDADGALLALTEMQSQGGRRIHAQQIALRAQQQLKNWGEVLKLVRTLEKREAIHPAVAVRLRQLAAENLLRDRR
HNADALLELWHSLTPTERHSPRLADLAAELLVALNRPQEARKIVEEALAQNWDARLLRRYPDTTGGDALPLIQKAEAWRK
ERPEDADLLFALGRLCLHQQLWGKAQSFLEQALKLADNETLKIRSHRALARLHEQLGDVSKAGAHYRESALAMNIV

Sequences:

>Translated_396_residues
MALRGLLWLAFLFAIAVVLAIVGRFDTGQVLLVYPPYRVDISLNLFIVGIIVAFIVIYALLRIVRNIWRMPQRVAAYRAR
QRVAKAHAALRDAIGNLYAGRFSRAEKAARDSLANPDNKGAAGLIAANAAHRMHEYTRRDEYLAQIDAADWQDARLMATA
DMRADGRDADGALLALTEMQSQGGRRIHAQQIALRAQQQLKNWGEVLKLVRTLEKREAIHPAVAVRLRQLAAENLLRDRR
HNADALLELWHSLTPTERHSPRLADLAAELLVALNRPQEARKIVEEALAQNWDARLLRRYPDTTGGDALPLIQKAEAWRK
ERPEDADLLFALGRLCLHQQLWGKAQSFLEQALKLADNETLKIRSHRALARLHEQLGDVSKAGAHYRESALAMNIV
>Mature_395_residues
ALRGLLWLAFLFAIAVVLAIVGRFDTGQVLLVYPPYRVDISLNLFIVGIIVAFIVIYALLRIVRNIWRMPQRVAAYRARQ
RVAKAHAALRDAIGNLYAGRFSRAEKAARDSLANPDNKGAAGLIAANAAHRMHEYTRRDEYLAQIDAADWQDARLMATAD
MRADGRDADGALLALTEMQSQGGRRIHAQQIALRAQQQLKNWGEVLKLVRTLEKREAIHPAVAVRLRQLAAENLLRDRRH
NADALLELWHSLTPTERHSPRLADLAAELLVALNRPQEARKIVEEALAQNWDARLLRRYPDTTGGDALPLIQKAEAWRKE
RPEDADLLFALGRLCLHQQLWGKAQSFLEQALKLADNETLKIRSHRALARLHEQLGDVSKAGAHYRESALAMNIV

Specific function: Unknown

COG id: COG3071

COG function: function code H; Uncharacterized enzyme of heme biosynthesis

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 44569; Mature: 44438

Theoretical pI: Translated: 10.48; Mature: 10.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALRGLLWLAFLFAIAVVLAIVGRFDTGQVLLVYPPYRVDISLNLFIVGIIVAFIVIYAL
CCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCEEEEEEHHHHHHHHHHHHHHHHHH
LRIVRNIWRMPQRVAAYRARQRVAKAHAALRDAIGNLYAGRFSRAEKAARDSLANPDNKG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
AAGLIAANAAHRMHEYTRRDEYLAQIDAADWQDARLMATADMRADGRDADGALLALTEMQ
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHH
SQGGRRIHAQQIALRAQQQLKNWGEVLKLVRTLEKREAIHPAVAVRLRQLAAENLLRDRR
HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
HNADALLELWHSLTPTERHSPRLADLAAELLVALNRPQEARKIVEEALAQNWDARLLRRY
CCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHC
PDTTGGDALPLIQKAEAWRKERPEDADLLFALGRLCLHQQLWGKAQSFLEQALKLADNET
CCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
LKIRSHRALARLHEQLGDVSKAGAHYRESALAMNIV
EEHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCC
>Mature Secondary Structure 
ALRGLLWLAFLFAIAVVLAIVGRFDTGQVLLVYPPYRVDISLNLFIVGIIVAFIVIYAL
CHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCEEEEEEHHHHHHHHHHHHHHHHHH
LRIVRNIWRMPQRVAAYRARQRVAKAHAALRDAIGNLYAGRFSRAEKAARDSLANPDNKG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
AAGLIAANAAHRMHEYTRRDEYLAQIDAADWQDARLMATADMRADGRDADGALLALTEMQ
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHH
SQGGRRIHAQQIALRAQQQLKNWGEVLKLVRTLEKREAIHPAVAVRLRQLAAENLLRDRR
HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
HNADALLELWHSLTPTERHSPRLADLAAELLVALNRPQEARKIVEEALAQNWDARLLRRY
CCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHC
PDTTGGDALPLIQKAEAWRKERPEDADLLFALGRLCLHQQLWGKAQSFLEQALKLADNET
CCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
LKIRSHRALARLHEQLGDVSKAGAHYRESALAMNIV
EEHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA