| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is 186476928
Identifier: 186476928
GI number: 186476928
Start: 2440127
End: 2441317
Strand: Reverse
Name: 186476928
Synonym: Bphy_2177
Alternate gene names: NA
Gene position: 2441317-2440127 (Counterclockwise)
Preceding gene: 186476929
Following gene: 186476924
Centisome position: 70.17
GC content: 64.06
Gene sequence:
>1191_bases ATGGCGCTGCGTGGACTTCTCTGGCTCGCATTCCTGTTCGCGATCGCCGTCGTGCTCGCGATCGTCGGGCGCTTCGACAC GGGGCAGGTGCTGCTCGTCTACCCGCCGTATCGCGTCGACATCTCGCTGAACCTGTTCATCGTCGGCATCATCGTCGCAT TCATCGTGATCTACGCGTTGTTGCGCATCGTGCGCAACATCTGGCGCATGCCGCAGCGCGTCGCCGCGTACCGTGCGCGC CAGCGCGTCGCGAAGGCGCACGCGGCCTTGCGCGATGCGATCGGCAATCTGTACGCGGGCCGTTTCTCGCGCGCCGAGAA GGCAGCCCGCGATTCGCTGGCCAACCCCGACAACAAGGGTGCGGCGGGGCTGATTGCCGCGAACGCCGCGCACCGGATGC ACGAGTACACGCGCCGCGACGAATATCTCGCGCAGATCGATGCGGCCGACTGGCAGGACGCGCGGCTGATGGCGACGGCC GACATGCGTGCAGATGGTCGTGATGCCGACGGCGCGCTGCTCGCGCTGACGGAAATGCAATCGCAGGGCGGCCGGCGCAT TCACGCGCAGCAGATTGCGTTGCGTGCGCAGCAACAGCTGAAGAATTGGGGCGAGGTGTTGAAGCTCGTCAGGACGCTCG AAAAGCGCGAGGCGATTCATCCCGCCGTGGCTGTGCGTCTGCGTCAGCTGGCGGCCGAGAACCTGCTGCGAGACCGCCGT CACAATGCCGATGCGCTGCTCGAACTGTGGCACTCGCTGACGCCGACCGAGCGGCATTCGCCGCGTCTCGCGGATTTGGC GGCGGAATTGCTGGTTGCGCTCAATCGCCCTCAGGAAGCGCGCAAGATCGTCGAGGAAGCGCTTGCGCAGAACTGGGATG CCCGGTTGTTGCGCCGTTATCCCGATACGACGGGTGGCGATGCGTTGCCGCTGATCCAAAAGGCGGAGGCGTGGCGGAAG GAGCGTCCCGAGGACGCTGATCTGCTGTTCGCGCTAGGGCGGTTGTGTCTGCATCAGCAGTTGTGGGGGAAGGCGCAGTC GTTCCTTGAACAGGCGCTTAAGCTCGCCGATAACGAGACGCTGAAAATTCGGTCGCATAGAGCGCTCGCGCGGTTGCACG AGCAGCTAGGCGATGTTTCAAAGGCTGGCGCGCATTATCGTGAGAGTGCTTTGGCGATGAATATTGTTTAA
Upstream 100 bases:
>100_bases ACCTCATCAAGCAGATCGACGAAGGCTCGGGCGCCGTCGACGTTCCGAACCTGAATACGAGCCTGCAGGCCGTGCATCAA TATCGGAACCGGGGTTAATC
Downstream 100 bases:
>100_bases TGGTTTTTCTGCCTGCGACGCAGTCGGGATCTGGTTTTTTGGCCCTTCGCGCAAAAAAACACAGCGCATCGACAGCACCA GAAACAAGAAACCCGCCCGC
Product: HemY domain-containing protein
Products: NA
Alternate protein names: HemY Protein; Protein Porphyrin Biosynthesis; HemY Domain-Containing Protein; HemY-Like Protein; HemY-Like; HemY N-Terminal; Protoheme Ix Synthesis Protein; Porphyrin Biosynthesis Protein; HemY N-Terminal Domain Protein; Protoheme IX Synthesis Protein; HemY N-Terminal Domain-Containing Protein; Metal Dependent Phosphohydrolase; HemY Protein N-Terminus Family Protein
Number of amino acids: Translated: 396; Mature: 395
Protein sequence:
>396_residues MALRGLLWLAFLFAIAVVLAIVGRFDTGQVLLVYPPYRVDISLNLFIVGIIVAFIVIYALLRIVRNIWRMPQRVAAYRAR QRVAKAHAALRDAIGNLYAGRFSRAEKAARDSLANPDNKGAAGLIAANAAHRMHEYTRRDEYLAQIDAADWQDARLMATA DMRADGRDADGALLALTEMQSQGGRRIHAQQIALRAQQQLKNWGEVLKLVRTLEKREAIHPAVAVRLRQLAAENLLRDRR HNADALLELWHSLTPTERHSPRLADLAAELLVALNRPQEARKIVEEALAQNWDARLLRRYPDTTGGDALPLIQKAEAWRK ERPEDADLLFALGRLCLHQQLWGKAQSFLEQALKLADNETLKIRSHRALARLHEQLGDVSKAGAHYRESALAMNIV
Sequences:
>Translated_396_residues MALRGLLWLAFLFAIAVVLAIVGRFDTGQVLLVYPPYRVDISLNLFIVGIIVAFIVIYALLRIVRNIWRMPQRVAAYRAR QRVAKAHAALRDAIGNLYAGRFSRAEKAARDSLANPDNKGAAGLIAANAAHRMHEYTRRDEYLAQIDAADWQDARLMATA DMRADGRDADGALLALTEMQSQGGRRIHAQQIALRAQQQLKNWGEVLKLVRTLEKREAIHPAVAVRLRQLAAENLLRDRR HNADALLELWHSLTPTERHSPRLADLAAELLVALNRPQEARKIVEEALAQNWDARLLRRYPDTTGGDALPLIQKAEAWRK ERPEDADLLFALGRLCLHQQLWGKAQSFLEQALKLADNETLKIRSHRALARLHEQLGDVSKAGAHYRESALAMNIV >Mature_395_residues ALRGLLWLAFLFAIAVVLAIVGRFDTGQVLLVYPPYRVDISLNLFIVGIIVAFIVIYALLRIVRNIWRMPQRVAAYRARQ RVAKAHAALRDAIGNLYAGRFSRAEKAARDSLANPDNKGAAGLIAANAAHRMHEYTRRDEYLAQIDAADWQDARLMATAD MRADGRDADGALLALTEMQSQGGRRIHAQQIALRAQQQLKNWGEVLKLVRTLEKREAIHPAVAVRLRQLAAENLLRDRRH NADALLELWHSLTPTERHSPRLADLAAELLVALNRPQEARKIVEEALAQNWDARLLRRYPDTTGGDALPLIQKAEAWRKE RPEDADLLFALGRLCLHQQLWGKAQSFLEQALKLADNETLKIRSHRALARLHEQLGDVSKAGAHYRESALAMNIV
Specific function: Unknown
COG id: COG3071
COG function: function code H; Uncharacterized enzyme of heme biosynthesis
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44569; Mature: 44438
Theoretical pI: Translated: 10.48; Mature: 10.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALRGLLWLAFLFAIAVVLAIVGRFDTGQVLLVYPPYRVDISLNLFIVGIIVAFIVIYAL CCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCEEEEEEHHHHHHHHHHHHHHHHHH LRIVRNIWRMPQRVAAYRARQRVAKAHAALRDAIGNLYAGRFSRAEKAARDSLANPDNKG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC AAGLIAANAAHRMHEYTRRDEYLAQIDAADWQDARLMATADMRADGRDADGALLALTEMQ CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHH SQGGRRIHAQQIALRAQQQLKNWGEVLKLVRTLEKREAIHPAVAVRLRQLAAENLLRDRR HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC HNADALLELWHSLTPTERHSPRLADLAAELLVALNRPQEARKIVEEALAQNWDARLLRRY CCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHC PDTTGGDALPLIQKAEAWRKERPEDADLLFALGRLCLHQQLWGKAQSFLEQALKLADNET CCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC LKIRSHRALARLHEQLGDVSKAGAHYRESALAMNIV EEHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCC >Mature Secondary Structure ALRGLLWLAFLFAIAVVLAIVGRFDTGQVLLVYPPYRVDISLNLFIVGIIVAFIVIYAL CHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCEEEEEEHHHHHHHHHHHHHHHHHH LRIVRNIWRMPQRVAAYRARQRVAKAHAALRDAIGNLYAGRFSRAEKAARDSLANPDNKG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC AAGLIAANAAHRMHEYTRRDEYLAQIDAADWQDARLMATADMRADGRDADGALLALTEMQ CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHH SQGGRRIHAQQIALRAQQQLKNWGEVLKLVRTLEKREAIHPAVAVRLRQLAAENLLRDRR HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC HNADALLELWHSLTPTERHSPRLADLAAELLVALNRPQEARKIVEEALAQNWDARLLRRY CCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHC PDTTGGDALPLIQKAEAWRKERPEDADLLFALGRLCLHQQLWGKAQSFLEQALKLADNET CCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC LKIRSHRALARLHEQLGDVSKAGAHYRESALAMNIV EEHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA