| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
Click here to switch to the map view.
The map label for this gene is 186476875
Identifier: 186476875
GI number: 186476875
Start: 2382912
End: 2383370
Strand: Reverse
Name: 186476875
Synonym: Bphy_2122
Alternate gene names: NA
Gene position: 2383370-2382912 (Counterclockwise)
Preceding gene: 186476876
Following gene: 186476868
Centisome position: 68.5
GC content: 63.18
Gene sequence:
>459_bases ATGAACAAGGCGATTGAAGTCGCGCTCTTTCTGCATCTGCTGGGCGTCGCCGTGTGGATCGGCGGCATGATATTCGCGCA TTTCTGCCTGCGCCCGGCACTCGAGGACCTCTCGCCGCAATTGCGGCTGCCGCTGTGGGAGTCGGTATTTGGCCGCTTCT TCAACTGGGTCGGCGTGTCCGTGCTCGTCATTCTGCTGACGGGCGGTTTCCTGCTGATGCAATTCGGCGGCGGTCACGCG ACGTGGCAGCTCCACGCGATGGCGGGCATCGGCATCATCATGATGCTGATTTTCGGGCATATTCGGTTCGCGGTGTTTCC GCGCATCCGTCGTGCGGTGCAGGCGCAGAAATGGCCCGATGGCGCGCGCGCCGTGGCGACGGTGCGGCGTCTCGTCGTCG TCAATCTCGTGCTCGGTATCGTGACGATAGGCGTGGCGGCGATGTCGCGCGGATTCTGA
Upstream 100 bases:
>100_bases CATCATGTGGCTGGTCGAACGCGGTCATTGACATATGTCAGTGCTGGGCTTGTCGACTGGACGTCACGACAGCGCGCTAC ATCGGGAATGGAAAACAACT
Downstream 100 bases:
>100_bases GCGCACGCTGCGTTCCAAACGAAAGCCCCGCAAATGCGGCGCTTGTACATTGGCGGCCAGCCTGCGGGCAACGTTTGATC ACCGCACGTGCCCAAAGAAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 152; Mature: 152
Protein sequence:
>152_residues MNKAIEVALFLHLLGVAVWIGGMIFAHFCLRPALEDLSPQLRLPLWESVFGRFFNWVGVSVLVILLTGGFLLMQFGGGHA TWQLHAMAGIGIIMMLIFGHIRFAVFPRIRRAVQAQKWPDGARAVATVRRLVVVNLVLGIVTIGVAAMSRGF
Sequences:
>Translated_152_residues MNKAIEVALFLHLLGVAVWIGGMIFAHFCLRPALEDLSPQLRLPLWESVFGRFFNWVGVSVLVILLTGGFLLMQFGGGHA TWQLHAMAGIGIIMMLIFGHIRFAVFPRIRRAVQAQKWPDGARAVATVRRLVVVNLVLGIVTIGVAAMSRGF >Mature_152_residues MNKAIEVALFLHLLGVAVWIGGMIFAHFCLRPALEDLSPQLRLPLWESVFGRFFNWVGVSVLVILLTGGFLLMQFGGGHA TWQLHAMAGIGIIMMLIFGHIRFAVFPRIRRAVQAQKWPDGARAVATVRRLVVVNLVLGIVTIGVAAMSRGF
Specific function: Unknown
COG id: COG5615
COG function: function code S; Predicted integral membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16749; Mature: 16749
Theoretical pI: Translated: 12.27; Mature: 12.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 4.6 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 4.6 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKAIEVALFLHLLGVAVWIGGMIFAHFCLRPALEDLSPQLRLPLWESVFGRFFNWVGVS CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCHHHHHHHHHHHHHHHH VLVILLTGGFLLMQFGGGHATWQLHAMAGIGIIMMLIFGHIRFAVFPRIRRAVQAQKWPD HHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC GARAVATVRRLVVVNLVLGIVTIGVAAMSRGF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MNKAIEVALFLHLLGVAVWIGGMIFAHFCLRPALEDLSPQLRLPLWESVFGRFFNWVGVS CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCHHHHHHHHHHHHHHHH VLVILLTGGFLLMQFGGGHATWQLHAMAGIGIIMMLIFGHIRFAVFPRIRRAVQAQKWPD HHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC GARAVATVRRLVVVNLVLGIVTIGVAAMSRGF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA