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The map label for this gene is ykgB [H]

Identifier: 186476844

GI number: 186476844

Start: 2348104

End: 2349261

Strand: Reverse

Name: ykgB [H]

Synonym: Bphy_2090

Alternate gene names: 186476844

Gene position: 2349261-2348104 (Counterclockwise)

Preceding gene: 186476846

Following gene: 186476841

Centisome position: 67.52

GC content: 62.95

Gene sequence:

>1158_bases
ATGGTATCGATTGCCGCCACGCAGGCTTTCGCGCAAGGCTTGGCCGCCCCGCCCGCCGACGGCGTCTACGATCTGATCGT
CGGCACCTACACGGGGCCGAAGAGCGAAGGCATCTACGTATACCGCTTCGATACGAAATCGGGCGATGCGATACCGATGT
CGTCGGCGAAGACGGACAATCCGTCGTATGTGATCGCGTCGCGCGACGGCCGCCACGTGTACGCGGTCAACGAGCAGCCC
GGCGACAACGGCCCCGCCGAACAGCGCGGCGGCATCAGCGCATTCAGCTTCGATGCAAGAAACGGGCAATTAACGTTCCT
GAACCGGGTGTCGTCGGACGGTAACGATCCGTGTTATCTGAGCATCTCGCCGGACGGCAAATATCTGACGACGGCCAACT
ATTCGGTGGCCGCGAACCCGGGCGGCAGTTTCGCCGTGTTCCCGCTGCAAGCGGACGGCCAGGTCGGTGCGTCCGTGCTG
ACCGTGCATCACGACGGCAGCGGCCCCGTGAAAGGGCGCCAGGACAACGCCCATGTGCACTCGACGGTGTTCTCGCCCGA
CGGCAAGTTTCTGTTCGCGCAGGATCTCGGTACGGACAAGCTGTACTCGTACCGCTATACGCCCGACGGCAGCCGTGGCC
TGTTCGGACCGACGGAGAAGCGCTATACCGACGTGAAAGCCGGCTCGGGCCCTCGCCATCTCGCATTCGGCGCGGATGGC
AAGTATGCGTATCTGACGAGCGAGCTGAGCGCGACCGTCACCGTATTCCGCTACGACGACGGCACGCTCACGCAATTGCA
GGTCGTGCCGATGACGAAGCCAGGCTTCAAGGGGCAAGTGGGCGCGGCGGCGATCCATCTGTCGCCGGATGGCCGCTTCC
TGTATGCGAGTAATCGTGGCGACGCGAACGAGATCGTGATCTATGCCGTCGACCCGGCCAATGGCCATCTACGCGAAGTG
GGCCGCCAGTCCAGTCTTGGCAAGGCGCCCCGGGAATTCTCAATCGATCCGACGGGGCAATGGCTGATCGTCGGCAATCA
GCTGAGCGATACGGCGTATGTGTTTCGTCGCGATCCACAGAGCGGACTGCTGGAGCCGAATCCGAAGCGTATCGATATCG
GTTCACCCGTCGACTTTCAGTGGGTGTCGCCGTCGTGA

Upstream 100 bases:

>100_bases
CATGCAGCGTCGTACACGAGTCGTAGCGTGTGCCGTGCCACAGCCTTTCAATTGCCGTCCGGGCCGTTCCCTAAGCTGGA
TCATCAGAGGGTTGACACTC

Downstream 100 bases:

>100_bases
TATGAGGTGACGGACGATATTGTCCGGTTCATGAATCGTCCTGTCGGGCCGCTGCGTTTTTCTGTCATTCTGCAGCGGCC
CGTCGCGCTTCAGTTCGAAC

Product: 6-phosphogluconolactonase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 385; Mature: 385

Protein sequence:

>385_residues
MVSIAATQAFAQGLAAPPADGVYDLIVGTYTGPKSEGIYVYRFDTKSGDAIPMSSAKTDNPSYVIASRDGRHVYAVNEQP
GDNGPAEQRGGISAFSFDARNGQLTFLNRVSSDGNDPCYLSISPDGKYLTTANYSVAANPGGSFAVFPLQADGQVGASVL
TVHHDGSGPVKGRQDNAHVHSTVFSPDGKFLFAQDLGTDKLYSYRYTPDGSRGLFGPTEKRYTDVKAGSGPRHLAFGADG
KYAYLTSELSATVTVFRYDDGTLTQLQVVPMTKPGFKGQVGAAAIHLSPDGRFLYASNRGDANEIVIYAVDPANGHLREV
GRQSSLGKAPREFSIDPTGQWLIVGNQLSDTAYVFRRDPQSGLLEPNPKRIDIGSPVDFQWVSPS

Sequences:

>Translated_385_residues
MVSIAATQAFAQGLAAPPADGVYDLIVGTYTGPKSEGIYVYRFDTKSGDAIPMSSAKTDNPSYVIASRDGRHVYAVNEQP
GDNGPAEQRGGISAFSFDARNGQLTFLNRVSSDGNDPCYLSISPDGKYLTTANYSVAANPGGSFAVFPLQADGQVGASVL
TVHHDGSGPVKGRQDNAHVHSTVFSPDGKFLFAQDLGTDKLYSYRYTPDGSRGLFGPTEKRYTDVKAGSGPRHLAFGADG
KYAYLTSELSATVTVFRYDDGTLTQLQVVPMTKPGFKGQVGAAAIHLSPDGRFLYASNRGDANEIVIYAVDPANGHLREV
GRQSSLGKAPREFSIDPTGQWLIVGNQLSDTAYVFRRDPQSGLLEPNPKRIDIGSPVDFQWVSPS
>Mature_385_residues
MVSIAATQAFAQGLAAPPADGVYDLIVGTYTGPKSEGIYVYRFDTKSGDAIPMSSAKTDNPSYVIASRDGRHVYAVNEQP
GDNGPAEQRGGISAFSFDARNGQLTFLNRVSSDGNDPCYLSISPDGKYLTTANYSVAANPGGSFAVFPLQADGQVGASVL
TVHHDGSGPVKGRQDNAHVHSTVFSPDGKFLFAQDLGTDKLYSYRYTPDGSRGLFGPTEKRYTDVKAGSGPRHLAFGADG
KYAYLTSELSATVTVFRYDDGTLTQLQVVPMTKPGFKGQVGAAAIHLSPDGRFLYASNRGDANEIVIYAVDPANGHLREV
GRQSSLGKAPREFSIDPTGQWLIVGNQLSDTAYVFRRDPQSGLLEPNPKRIDIGSPVDFQWVSPS

Specific function: Unknown

COG id: COG2706

COG function: function code G; 3-carboxymuconate cyclase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cycloisomerase 2 family [H]

Homologues:

Organism=Escherichia coli, GI1786983, Length=338, Percent_Identity=27.810650887574, Blast_Score=101, Evalue=8e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011048
- InterPro:   IPR019405
- InterPro:   IPR015943 [H]

Pfam domain/function: PF10282 DUF2394 [H]

EC number: NA

Molecular weight: Translated: 41150; Mature: 41150

Theoretical pI: Translated: 6.31; Mature: 6.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVSIAATQAFAQGLAAPPADGVYDLIVGTYTGPKSEGIYVYRFDTKSGDAIPMSSAKTDN
CEEEEHHHHHHHHCCCCCCCCEEEEEEEECCCCCCCCEEEEEEECCCCCEEECCCCCCCC
PSYVIASRDGRHVYAVNEQPGDNGPAEQRGGISAFSFDARNGQLTFLNRVSSDGNDPCYL
CCEEEEECCCCEEEEECCCCCCCCCHHHCCCCEEEEEECCCCEEEEEEECCCCCCCCEEE
SISPDGKYLTTANYSVAANPGGSFAVFPLQADGQVGASVLTVHHDGSGPVKGRQDNAHVH
EECCCCCEEEECCEEEEECCCCCEEEEEEECCCCCCEEEEEEEECCCCCCCCCCCCCEEE
STVFSPDGKFLFAQDLGTDKLYSYRYTPDGSRGLFGPTEKRYTDVKAGSGPRHLAFGADG
EEEECCCCCEEEEECCCCCCEEEEEECCCCCCCCCCCCCCCEEEECCCCCCCEEEECCCC
KYAYLTSELSATVTVFRYDDGTLTQLQVVPMTKPGFKGQVGAAAIHLSPDGRFLYASNRG
CEEEEEECCEEEEEEEEECCCCEEEEEEEECCCCCCCCCCCEEEEEECCCCCEEEECCCC
DANEIVIYAVDPANGHLREVGRQSSLGKAPREFSIDPTGQWLIVGNQLSDTAYVFRRDPQ
CCCEEEEEEECCCCCHHHHHCCCCCCCCCCCEECCCCCCCEEEECCCCCCEEEEEEECCC
SGLLEPNPKRIDIGSPVDFQWVSPS
CCCCCCCCCEEECCCCCCEEEECCC
>Mature Secondary Structure
MVSIAATQAFAQGLAAPPADGVYDLIVGTYTGPKSEGIYVYRFDTKSGDAIPMSSAKTDN
CEEEEHHHHHHHHCCCCCCCCEEEEEEEECCCCCCCCEEEEEEECCCCCEEECCCCCCCC
PSYVIASRDGRHVYAVNEQPGDNGPAEQRGGISAFSFDARNGQLTFLNRVSSDGNDPCYL
CCEEEEECCCCEEEEECCCCCCCCCHHHCCCCEEEEEECCCCEEEEEEECCCCCCCCEEE
SISPDGKYLTTANYSVAANPGGSFAVFPLQADGQVGASVLTVHHDGSGPVKGRQDNAHVH
EECCCCCEEEECCEEEEECCCCCEEEEEEECCCCCCEEEEEEEECCCCCCCCCCCCCEEE
STVFSPDGKFLFAQDLGTDKLYSYRYTPDGSRGLFGPTEKRYTDVKAGSGPRHLAFGADG
EEEECCCCCEEEEECCCCCCEEEEEECCCCCCCCCCCCCCCEEEECCCCCCCEEEECCCC
KYAYLTSELSATVTVFRYDDGTLTQLQVVPMTKPGFKGQVGAAAIHLSPDGRFLYASNRG
CEEEEEECCEEEEEEEEECCCCEEEEEEEECCCCCCCCCCCEEEEEECCCCCEEEECCCC
DANEIVIYAVDPANGHLREVGRQSSLGKAPREFSIDPTGQWLIVGNQLSDTAYVFRRDPQ
CCCEEEEEEECCCCCHHHHHCCCCCCCCCCCEECCCCCCCEEEECCCCCCEEEEEEECCC
SGLLEPNPKRIDIGSPVDFQWVSPS
CCCCCCCCCEEECCCCCCEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]