| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is qor [H]
Identifier: 186476814
GI number: 186476814
Start: 2312179
End: 2313153
Strand: Reverse
Name: qor [H]
Synonym: Bphy_2060
Alternate gene names: 186476814
Gene position: 2313153-2312179 (Counterclockwise)
Preceding gene: 186476815
Following gene: 186476813
Centisome position: 66.49
GC content: 65.13
Gene sequence:
>975_bases ATGACCAAAGCAATTCGATTCGACAAGACGGGCGGACCGGAAGTGATGAAGTGGGTCGACGTCGACGTGGGCGCGCCGGG TAGTGGCGAGATCCGTATCAGGCAGCATGCTGTCGGCTTGAACTATATCGACGTGTATTTCCGCACCGGGCTGTATCCGT TGCCGCTGCCGGGCGGGCTCGGCATGGAAGCGGCGGGCGAGGTGGTCGCCGTTGGCCCGGACGTGACTGACGTGAAAGTG GGTGAGCGCGTCGCGTATGTTGCGCGGCCGCCGGGCGCGTATGCGCAGGAACGCGTGCTGCCCGCGGCCCAGGTCGTGAA GCTGCCCGACGCGATCGGCTATGAGGAGGCGGCCTCCGTCATGCTGCAGGGCTTGACCGCGCAATATCTGCTGCGCCGCA CGTACCCGGTGAAGCAGGGCGACACGATCCTGATCCAGGCGGCCGCGGGCGGCGTCGGCCTGCTCGTGTGCCAGTGGGCC AAGGCGCTGGGCGCGACGGTGATCGGCACGGTCAGCTCGGACGAGAAGGCGGAGATCGCGCAGGCGCACGGCTGCGACTA TCCCATCGTGTACACGCGCGAGAACTTCACGAAGCGTGTGCGCGAGATCACGAACGGCGCAGGCGTGCCCGTCGTGTACG ACTCGATCGGCAAGGATACCTTTACGGCCTCGCTCGATTGTCTTGCGCCGCTTGGGATGTTCGTGAGCTTCGGCAATGCG TCGGGCCCGTTGCCGCCGATCGATTCGTCGGAGTTCGCCGGGCGCGGCTCGCTGTTCTTCACGCGTCCAACACTCTTTAC CTATATGGGCAAGCGCAGCGACTACGACGCGATGGCGGCGGAGCTGTTCGACGTCATCGGCTCAGGTAAGGTGAAGACGA GCATCAATCAGCGCTATGCGCTGTCCGATGTCGGCAAGGCGCACGCCGATCTGGAGGCGCGGAAAACGACCGGCTCGACG GTTTTGCTGCCCTGA
Upstream 100 bases:
>100_bases GACGTGCTGACGCTGCGTCTCACTCAGCAGGTCTGATCACGTTGTCCGATTTCAATCATGCAATGCTCGCCACTCGGCCG CGAGCGAATCTGGAGACAAC
Downstream 100 bases:
>100_bases AGCGTTTGGCCGGGCGAGCACAAATTCGACTACTGGTTCGCGAATTACGGCGCCGTAACGGACTGCACATCAATACTGCG CGTAGACGAGGGAGCCACCG
Product: alcohol dehydrogenase
Products: NA
Alternate protein names: NADPH:quinone reductase [H]
Number of amino acids: Translated: 324; Mature: 323
Protein sequence:
>324_residues MTKAIRFDKTGGPEVMKWVDVDVGAPGSGEIRIRQHAVGLNYIDVYFRTGLYPLPLPGGLGMEAAGEVVAVGPDVTDVKV GERVAYVARPPGAYAQERVLPAAQVVKLPDAIGYEEAASVMLQGLTAQYLLRRTYPVKQGDTILIQAAAGGVGLLVCQWA KALGATVIGTVSSDEKAEIAQAHGCDYPIVYTRENFTKRVREITNGAGVPVVYDSIGKDTFTASLDCLAPLGMFVSFGNA SGPLPPIDSSEFAGRGSLFFTRPTLFTYMGKRSDYDAMAAELFDVIGSGKVKTSINQRYALSDVGKAHADLEARKTTGST VLLP
Sequences:
>Translated_324_residues MTKAIRFDKTGGPEVMKWVDVDVGAPGSGEIRIRQHAVGLNYIDVYFRTGLYPLPLPGGLGMEAAGEVVAVGPDVTDVKV GERVAYVARPPGAYAQERVLPAAQVVKLPDAIGYEEAASVMLQGLTAQYLLRRTYPVKQGDTILIQAAAGGVGLLVCQWA KALGATVIGTVSSDEKAEIAQAHGCDYPIVYTRENFTKRVREITNGAGVPVVYDSIGKDTFTASLDCLAPLGMFVSFGNA SGPLPPIDSSEFAGRGSLFFTRPTLFTYMGKRSDYDAMAAELFDVIGSGKVKTSINQRYALSDVGKAHADLEARKTTGST VLLP >Mature_323_residues TKAIRFDKTGGPEVMKWVDVDVGAPGSGEIRIRQHAVGLNYIDVYFRTGLYPLPLPGGLGMEAAGEVVAVGPDVTDVKVG ERVAYVARPPGAYAQERVLPAAQVVKLPDAIGYEEAASVMLQGLTAQYLLRRTYPVKQGDTILIQAAAGGVGLLVCQWAK ALGATVIGTVSSDEKAEIAQAHGCDYPIVYTRENFTKRVREITNGAGVPVVYDSIGKDTFTASLDCLAPLGMFVSFGNAS GPLPPIDSSEFAGRGSLFFTRPTLFTYMGKRSDYDAMAAELFDVIGSGKVKTSINQRYALSDVGKAHADLEARKTTGSTV LLP
Specific function: Unknown
COG id: COG0604
COG function: function code CR; NADPH:quinone reductase and related Zn-dependent oxidoreductases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the zinc-containing alcohol dehydrogenase family. Quinone oxidoreductase subfamily [H]
Homologues:
Organism=Homo sapiens, GI22538446, Length=333, Percent_Identity=30.9309309309309, Blast_Score=135, Evalue=7e-32, Organism=Homo sapiens, GI22538444, Length=333, Percent_Identity=30.9309309309309, Blast_Score=135, Evalue=7e-32, Organism=Homo sapiens, GI194239674, Length=329, Percent_Identity=28.2674772036474, Blast_Score=127, Evalue=1e-29, Organism=Homo sapiens, GI13236495, Length=329, Percent_Identity=28.2674772036474, Blast_Score=127, Evalue=1e-29, Organism=Homo sapiens, GI18379349, Length=313, Percent_Identity=29.073482428115, Blast_Score=125, Evalue=7e-29, Organism=Homo sapiens, GI28557745, Length=226, Percent_Identity=35.3982300884956, Blast_Score=115, Evalue=5e-26, Organism=Homo sapiens, GI194239676, Length=264, Percent_Identity=28.030303030303, Blast_Score=110, Evalue=2e-24, Organism=Homo sapiens, GI24308257, Length=322, Percent_Identity=27.639751552795, Blast_Score=97, Evalue=1e-20, Organism=Homo sapiens, GI41872631, Length=215, Percent_Identity=32.093023255814, Blast_Score=68, Evalue=1e-11, Organism=Homo sapiens, GI197927207, Length=195, Percent_Identity=25.1282051282051, Blast_Score=66, Evalue=3e-11, Organism=Escherichia coli, GI1790485, Length=327, Percent_Identity=46.177370030581, Blast_Score=289, Evalue=2e-79, Organism=Caenorhabditis elegans, GI17507255, Length=317, Percent_Identity=26.813880126183, Blast_Score=91, Evalue=1e-18, Organism=Caenorhabditis elegans, GI17556000, Length=218, Percent_Identity=29.3577981651376, Blast_Score=66, Evalue=2e-11, Organism=Caenorhabditis elegans, GI17536829, Length=307, Percent_Identity=24.4299674267101, Blast_Score=65, Evalue=5e-11, Organism=Saccharomyces cerevisiae, GI6319520, Length=324, Percent_Identity=40.4320987654321, Blast_Score=226, Evalue=4e-60, Organism=Saccharomyces cerevisiae, GI6323729, Length=340, Percent_Identity=25.8823529411765, Blast_Score=78, Evalue=2e-15, Organism=Drosophila melanogaster, GI45550423, Length=304, Percent_Identity=24.6710526315789, Blast_Score=69, Evalue=6e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013149 - InterPro: IPR013154 - InterPro: IPR002085 - InterPro: IPR011032 - InterPro: IPR016040 - InterPro: IPR002364 [H]
Pfam domain/function: PF08240 ADH_N; PF00107 ADH_zinc_N [H]
EC number: =1.6.5.5 [H]
Molecular weight: Translated: 34443; Mature: 34312
Theoretical pI: Translated: 6.29; Mature: 6.29
Prosite motif: PS01162 QOR_ZETA_CRYSTAL
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKAIRFDKTGGPEVMKWVDVDVGAPGSGEIRIRQHAVGLNYIDVYFRTGLYPLPLPGGL CCCCEECCCCCCCCEEEEEEEECCCCCCCCEEEEEEECCCCCEEEHHHCCCCCCCCCCCC GMEAAGEVVAVGPDVTDVKVGERVAYVARPPGAYAQERVLPAAQVVKLPDAIGYEEAASV CCCCCCCEEEECCCCCEEECCCEEEEEECCCCCHHHHHCCCHHHHHHCCCCCCHHHHHHH MLQGLTAQYLLRRTYPVKQGDTILIQAAAGGVGLLVCQWAKALGATVIGTVSSDEKAEIA HHHHHHHHHHHHHCCCCCCCCEEEEEECCCCHHHHHHHHHHHHCCEEEEECCCCCHHHHH QAHGCDYPIVYTRENFTKRVREITNGAGVPVVYDSIGKDTFTASLDCLAPLGMFVSFGNA HHCCCCCCEEEECHHHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHHHHHHEECCCC SGPLPPIDSSEFAGRGSLFFTRPTLFTYMGKRSDYDAMAAELFDVIGSGKVKTSINQRYA CCCCCCCCCCCCCCCCCEEEECCHHHHHHCCCCCHHHHHHHHHHHHCCCCEEECCCCCEE LSDVGKAHADLEARKTTGSTVLLP HHHHHHHHCCCHHHCCCCCEEECC >Mature Secondary Structure TKAIRFDKTGGPEVMKWVDVDVGAPGSGEIRIRQHAVGLNYIDVYFRTGLYPLPLPGGL CCCEECCCCCCCCEEEEEEEECCCCCCCCEEEEEEECCCCCEEEHHHCCCCCCCCCCCC GMEAAGEVVAVGPDVTDVKVGERVAYVARPPGAYAQERVLPAAQVVKLPDAIGYEEAASV CCCCCCCEEEECCCCCEEECCCEEEEEECCCCCHHHHHCCCHHHHHHCCCCCCHHHHHHH MLQGLTAQYLLRRTYPVKQGDTILIQAAAGGVGLLVCQWAKALGATVIGTVSSDEKAEIA HHHHHHHHHHHHHCCCCCCCCEEEEEECCCCHHHHHHHHHHHHCCEEEEECCCCCHHHHH QAHGCDYPIVYTRENFTKRVREITNGAGVPVVYDSIGKDTFTASLDCLAPLGMFVSFGNA HHCCCCCCEEEECHHHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHHHHHHEECCCC SGPLPPIDSSEFAGRGSLFFTRPTLFTYMGKRSDYDAMAAELFDVIGSGKVKTSINQRYA CCCCCCCCCCCCCCCCCEEEECCHHHHHHCCCCCHHHHHHHHHHHHCCCCEEECCCCCEE LSDVGKAHADLEARKTTGSTVLLP HHHHHHHHCCCHHHCCCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10984043 [H]