| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is kdpA [H]
Identifier: 186476811
GI number: 186476811
Start: 2309946
End: 2311751
Strand: Reverse
Name: kdpA [H]
Synonym: Bphy_2057
Alternate gene names: 186476811
Gene position: 2311751-2309946 (Counterclockwise)
Preceding gene: 186476812
Following gene: 186476810
Centisome position: 66.45
GC content: 64.56
Gene sequence:
>1806_bases ATGAGCCTCAACAATGTCCTGCAGCCGGCATTTTTCATCGTCGTGCTGCTTGCCGCGGCCGTGCCCGTCTCGGGCTATCT GTCGCGCGTGATGGACGGCAGCTCGCGCGTCGTCAAACTGGGCGGCCCCATCGAAGGTCTGCTGTACCGTCTCGCGGGCG TCGATCCCTCGCAGGAAATGGGCTGGAAGCGCTACGCGATCGCGACGCTCGCGTTCAATCTGCTCGGCGTGGTGTTTCTC TATGCGTTGCTGCGCGTGCAAGGCTCGCTGCCCGGCAATCCGCAGCAATTCGGCGCGATGTCGGCCGATGGCGCGTTCAA CACGGCGATCAGCTTCGTCACCAACACGAACTGGCAGGACTACACGCCGGAACAGACGGTCGGCTATCTGACGCAGATGC TCGGCTTCACGGTGCAGAACTTCCTGTCGGCAGCGACGGGTATCGTCGTCGTGATCGCCCTGGTGCGCGGCTTCGCGCGC CACACCGCGCAGACCATCGGCAACTTCTGGGTCGACATCACGCGCGTGACGCTGTACGTGCTGCTGCCGATGGCGGCCAT CATCGCCGCGCTGCTGATGAGCCAGGGCGTGATCCAGAACTTCAAGTCCTATGAGGACGTGCCGACGCTGCAGACCACCA CGTACGCCGCGCCGAAAGTGGATGCCCAGGGCAATCCCGTGAAGGACGCAAAGGGCAACCCTGTGACCGTCGATACGCCC GTGAAGTCGCAGACCATCGCAATGGGCCCCGTTGCGTCGCAGGAAGCGATCAAGATGCTCGGCACGAACGGCGGCGGCTT CTTCAATGGCAATTCCGCGCATCCGTACGAGAACCCGACGCCGTTCTCGGATTTCGTGCAGATGTTCTCGATCCTGATCA TCCCCGCTGCGCTGTGTCTCGTGTTCGGCCGAATGATCGGCGATCGCCGGCAGGGCATCGCCGTGCTCGCGGTGATGACG ATCGCGTTCGCCGTCGCTGTCGCGGGCGAAATCGGCGCCGAGCAGGGCGGCAATCCACTCTTCACGTCGCTGCATGTCGA CCAGTCCGCGAGCGCGCTGCAGGCGGGCGGCAACATGGAAGGCAAGGAAACGCGCTTCGGCATCGCGCAGTCGGGCATTT TCACGGTCGCGACGACGGCGGCTTCGTGCGGCGCCGTTACCAATACGCACGATTCGCTCACGCCGCTCGGCGGCCTCGTG CCAATGCTGCTGATGCAGCTGGGCGAAGTGATCTTCGGCGGCGTGGGTTCGGGTCTGTACGGGATGCTGGTGTTCGCGTT GCTCGCGGTATTTGTCGCCGGGCTGATGATCGGCCGTACGCCGGAATACGTCGGCAAGAAGATCGAAGCGTACGAGATGA AGATGGTGTCGATCGTCGTGCTGCTCACGCCGCTGCTCGTGCTCGTCGCGACGTCGATTGCCGTGCTGACCGACGCGGGC AAGGCAGGCATCCTGAATCCGGGCGCACACGGCTTCTCGGAAATTCTCTACGGGTTCAGTTCGGCGGCGAACAACAACGG CAGCGCGTTCGCGGGCCTCACGGTGGGCACGCCGTTCTACAACTGGCTGACGGCGGTCGCGATGTGGTTCGGCCGCTTTG GCACGATCGTCCCGGTGCTCGCGATTGCCGGCTCGCTCGCCGCGAAGAAGCGCATTGCCGTGACGGGCGGCACGCTGCCG ACGCACGGACCGCTCTTTGTCGTGCTGCTGCTCGGCACGGTGCTGCTGGTCGGCGCGCTCACGTACGTGCCCGCGCTCGC GCTCGGTCCCGGCGTCGAACATTTGATGATGATCGCGGGCCATTGA
Upstream 100 bases:
>100_bases GGAGCGCGCTAATGAACTGGATCCTCTGGCTCTCGGGCGCGGCGACCGCGCTGCTGTTCGCCTATCTCGTCTATGCGCTG CTGCGCGCGGAGGACATTGA
Downstream 100 bases:
>100_bases TGCGCCGCACGCGACATACGAAGGCGCAAAAAACAGGCGAAGCAATTAGAGGAAGAAATGACTGACCATTCCGCCACTCG CTCCATGTTCGATCCGGCGC
Product: potassium-transporting ATPase subunit A
Products: NA
Alternate protein names: ATP phosphohydrolase [potassium-transporting] A chain; Potassium-binding and translocating subunit A; Potassium-translocating ATPase A chain [H]
Number of amino acids: Translated: 601; Mature: 600
Protein sequence:
>601_residues MSLNNVLQPAFFIVVLLAAAVPVSGYLSRVMDGSSRVVKLGGPIEGLLYRLAGVDPSQEMGWKRYAIATLAFNLLGVVFL YALLRVQGSLPGNPQQFGAMSADGAFNTAISFVTNTNWQDYTPEQTVGYLTQMLGFTVQNFLSAATGIVVVIALVRGFAR HTAQTIGNFWVDITRVTLYVLLPMAAIIAALLMSQGVIQNFKSYEDVPTLQTTTYAAPKVDAQGNPVKDAKGNPVTVDTP VKSQTIAMGPVASQEAIKMLGTNGGGFFNGNSAHPYENPTPFSDFVQMFSILIIPAALCLVFGRMIGDRRQGIAVLAVMT IAFAVAVAGEIGAEQGGNPLFTSLHVDQSASALQAGGNMEGKETRFGIAQSGIFTVATTAASCGAVTNTHDSLTPLGGLV PMLLMQLGEVIFGGVGSGLYGMLVFALLAVFVAGLMIGRTPEYVGKKIEAYEMKMVSIVVLLTPLLVLVATSIAVLTDAG KAGILNPGAHGFSEILYGFSSAANNNGSAFAGLTVGTPFYNWLTAVAMWFGRFGTIVPVLAIAGSLAAKKRIAVTGGTLP THGPLFVVLLLGTVLLVGALTYVPALALGPGVEHLMMIAGH
Sequences:
>Translated_601_residues MSLNNVLQPAFFIVVLLAAAVPVSGYLSRVMDGSSRVVKLGGPIEGLLYRLAGVDPSQEMGWKRYAIATLAFNLLGVVFL YALLRVQGSLPGNPQQFGAMSADGAFNTAISFVTNTNWQDYTPEQTVGYLTQMLGFTVQNFLSAATGIVVVIALVRGFAR HTAQTIGNFWVDITRVTLYVLLPMAAIIAALLMSQGVIQNFKSYEDVPTLQTTTYAAPKVDAQGNPVKDAKGNPVTVDTP VKSQTIAMGPVASQEAIKMLGTNGGGFFNGNSAHPYENPTPFSDFVQMFSILIIPAALCLVFGRMIGDRRQGIAVLAVMT IAFAVAVAGEIGAEQGGNPLFTSLHVDQSASALQAGGNMEGKETRFGIAQSGIFTVATTAASCGAVTNTHDSLTPLGGLV PMLLMQLGEVIFGGVGSGLYGMLVFALLAVFVAGLMIGRTPEYVGKKIEAYEMKMVSIVVLLTPLLVLVATSIAVLTDAG KAGILNPGAHGFSEILYGFSSAANNNGSAFAGLTVGTPFYNWLTAVAMWFGRFGTIVPVLAIAGSLAAKKRIAVTGGTLP THGPLFVVLLLGTVLLVGALTYVPALALGPGVEHLMMIAGH >Mature_600_residues SLNNVLQPAFFIVVLLAAAVPVSGYLSRVMDGSSRVVKLGGPIEGLLYRLAGVDPSQEMGWKRYAIATLAFNLLGVVFLY ALLRVQGSLPGNPQQFGAMSADGAFNTAISFVTNTNWQDYTPEQTVGYLTQMLGFTVQNFLSAATGIVVVIALVRGFARH TAQTIGNFWVDITRVTLYVLLPMAAIIAALLMSQGVIQNFKSYEDVPTLQTTTYAAPKVDAQGNPVKDAKGNPVTVDTPV KSQTIAMGPVASQEAIKMLGTNGGGFFNGNSAHPYENPTPFSDFVQMFSILIIPAALCLVFGRMIGDRRQGIAVLAVMTI AFAVAVAGEIGAEQGGNPLFTSLHVDQSASALQAGGNMEGKETRFGIAQSGIFTVATTAASCGAVTNTHDSLTPLGGLVP MLLMQLGEVIFGGVGSGLYGMLVFALLAVFVAGLMIGRTPEYVGKKIEAYEMKMVSIVVLLTPLLVLVATSIAVLTDAGK AGILNPGAHGFSEILYGFSSAANNNGSAFAGLTVGTPFYNWLTAVAMWFGRFGTIVPVLAIAGSLAAKKRIAVTGGTLPT HGPLFVVLLLGTVLLVGALTYVPALALGPGVEHLMMIAGH
Specific function: One of the components of the high-affinity ATP-driven potassium transport (or KDP) system, which catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions [H]
COG id: COG2060
COG function: function code P; K+-transporting ATPase, A chain
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the kdpA family [H]
Homologues:
Organism=Escherichia coli, GI1786915, Length=597, Percent_Identity=54.1038525963149, Blast_Score=621, Evalue=1e-179,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004623 [H]
Pfam domain/function: PF03814 KdpA [H]
EC number: =3.6.3.12 [H]
Molecular weight: Translated: 62807; Mature: 62676
Theoretical pI: Translated: 7.71; Mature: 7.71
Prosite motif: PS00107 PROTEIN_KINASE_ATP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLNNVLQPAFFIVVLLAAAVPVSGYLSRVMDGSSRVVKLGGPIEGLLYRLAGVDPSQEM CCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCEEEECCCHHHHHHHHHCCCCHHHH GWKRYAIATLAFNLLGVVFLYALLRVQGSLPGNPQQFGAMSADGAFNTAISFVTNTNWQD CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCHHHHHHHHCCCCCCC YTPEQTVGYLTQMLGFTVQNFLSAATGIVVVIALVRGFARHTAQTIGNFWVDITRVTLYV CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLPMAAIIAALLMSQGVIQNFKSYEDVPTLQTTTYAAPKVDAQGNPVKDAKGNPVTVDTP HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCC VKSQTIAMGPVASQEAIKMLGTNGGGFFNGNSAHPYENPTPFSDFVQMFSILIIPAALCL CCCCEEEECCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH VFGRMIGDRRQGIAVLAVMTIAFAVAVAGEIGAEQGGNPLFTSLHVDQSASALQAGGNME HHHHHHCCHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCHHHHHCCCCCC GKETRFGIAQSGIFTVATTAASCGAVTNTHDSLTPLGGLVPMLLMQLGEVIFGGVGSGLY CCHHHCCHHHCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHH GMLVFALLAVFVAGLMIGRTPEYVGKKIEAYEMKMVSIVVLLTPLLVLVATSIAVLTDAG HHHHHHHHHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC KAGILNPGAHGFSEILYGFSSAANNNGSAFAGLTVGTPFYNWLTAVAMWFGRFGTIVPVL CCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHH AIAGSLAAKKRIAVTGGTLPTHGPLFVVLLLGTVLLVGALTYVPALALGPGVEHLMMIAG HHHHHHHHCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCC H C >Mature Secondary Structure SLNNVLQPAFFIVVLLAAAVPVSGYLSRVMDGSSRVVKLGGPIEGLLYRLAGVDPSQEM CCHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCEEEECCCHHHHHHHHHCCCCHHHH GWKRYAIATLAFNLLGVVFLYALLRVQGSLPGNPQQFGAMSADGAFNTAISFVTNTNWQD CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCHHHHHHHHCCCCCCC YTPEQTVGYLTQMLGFTVQNFLSAATGIVVVIALVRGFARHTAQTIGNFWVDITRVTLYV CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLPMAAIIAALLMSQGVIQNFKSYEDVPTLQTTTYAAPKVDAQGNPVKDAKGNPVTVDTP HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCC VKSQTIAMGPVASQEAIKMLGTNGGGFFNGNSAHPYENPTPFSDFVQMFSILIIPAALCL CCCCEEEECCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH VFGRMIGDRRQGIAVLAVMTIAFAVAVAGEIGAEQGGNPLFTSLHVDQSASALQAGGNME HHHHHHCCHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCHHHHHCCCCCC GKETRFGIAQSGIFTVATTAASCGAVTNTHDSLTPLGGLVPMLLMQLGEVIFGGVGSGLY CCHHHCCHHHCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHH GMLVFALLAVFVAGLMIGRTPEYVGKKIEAYEMKMVSIVVLLTPLLVLVATSIAVLTDAG HHHHHHHHHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC KAGILNPGAHGFSEILYGFSSAANNNGSAFAGLTVGTPFYNWLTAVAMWFGRFGTIVPVL CCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHH AIAGSLAAKKRIAVTGGTLPTHGPLFVVLLLGTVLLVGALTYVPALALGPGVEHLMMIAG HHHHHHHHCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCC H C
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA