| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is 186476805
Identifier: 186476805
GI number: 186476805
Start: 2301408
End: 2302019
Strand: Reverse
Name: 186476805
Synonym: Bphy_2051
Alternate gene names: NA
Gene position: 2302019-2301408 (Counterclockwise)
Preceding gene: 186476806
Following gene: 186476804
Centisome position: 66.17
GC content: 67.81
Gene sequence:
>612_bases ATGCTTGAACCTCTTTCGCTTGCGGCGGGTCTGTCGTGGGGCAGCGGCTTGCGTCTTTATCTGACCGTCCTGATCGCGGG GGTGTTCGGTCGCGCCGGCTTCATCCATCTTCCCGATACGTTGTCCGTGCTGCAGTCGCCGTGGGTCATCGGCGCCGCCG CGCTGCTCAGCCTCGCCGAATTTCTCGCCGACAAGATTCCCGCGTTCGATTCCCTGTGGGACGCCGTTCACACGTTCATC CGTATTCCGGCAGGCGCCGTGCTGGCCGTCGGCGCGCTTGGCCATGCCGATCCCGCCATGATGACGATCGCCGCGCTCGC GGGCGGCACGCTCGCGGGCGCGGCGCATCTGACCAAGGCGGGCACCCGCGCGCTCATCAACCTGTCGCCGGAACCCGTGT CCAACGTGGTCACGTCCACCGCTGAGGACGGGCTCGTGTTCGGCGGCCTGTTGCTCGCGCTGTTCGTTCCCCTGCTGTTC CTCGTGCTGCTGGTCGGCTTCCTCGTGCTCGCGAGCTGGGTCCTGCCGCGTCTGTGGCGCAGCGTCCAGGGCGGCTTCCG CGGCATGGCGACCCACATGGTGTCGCGACTCGCGCGGAGCCGTCACGATTGA
Upstream 100 bases:
>100_bases GCGGATCCGGCGGCTTCGGCACGGCGGAGCCTCTGGCACTTCCGCGTCCCCGGCACGCCGCCGGAACTGACGGCACGCGA CGCGCGCCTCGGAGGCGGCC
Downstream 100 bases:
>100_bases GCGAAGCCGAACGCGTCACCACCACCGAGGCTCTCCCCGAGCGTCCACCCCATCATCGCAGGCACCGCGCACCTGCGCAT CGGTTGTCGCTGGGCCATTT
Product: putative transmembrane protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 203; Mature: 203
Protein sequence:
>203_residues MLEPLSLAAGLSWGSGLRLYLTVLIAGVFGRAGFIHLPDTLSVLQSPWVIGAAALLSLAEFLADKIPAFDSLWDAVHTFI RIPAGAVLAVGALGHADPAMMTIAALAGGTLAGAAHLTKAGTRALINLSPEPVSNVVTSTAEDGLVFGGLLLALFVPLLF LVLLVGFLVLASWVLPRLWRSVQGGFRGMATHMVSRLARSRHD
Sequences:
>Translated_203_residues MLEPLSLAAGLSWGSGLRLYLTVLIAGVFGRAGFIHLPDTLSVLQSPWVIGAAALLSLAEFLADKIPAFDSLWDAVHTFI RIPAGAVLAVGALGHADPAMMTIAALAGGTLAGAAHLTKAGTRALINLSPEPVSNVVTSTAEDGLVFGGLLLALFVPLLF LVLLVGFLVLASWVLPRLWRSVQGGFRGMATHMVSRLARSRHD >Mature_203_residues MLEPLSLAAGLSWGSGLRLYLTVLIAGVFGRAGFIHLPDTLSVLQSPWVIGAAALLSLAEFLADKIPAFDSLWDAVHTFI RIPAGAVLAVGALGHADPAMMTIAALAGGTLAGAAHLTKAGTRALINLSPEPVSNVVTSTAEDGLVFGGLLLALFVPLLF LVLLVGFLVLASWVLPRLWRSVQGGFRGMATHMVSRLARSRHD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21209; Mature: 21209
Theoretical pI: Translated: 9.26; Mature: 9.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLEPLSLAAGLSWGSGLRLYLTVLIAGVFGRAGFIHLPDTLSVLQSPWVIGAAALLSLAE CCCCHHHHHCCCCCCCHHHHHHHHHHHHHHCCCEEECCHHHHHHHCCHHHHHHHHHHHHH FLADKIPAFDSLWDAVHTFIRIPAGAVLAVGALGHADPAMMTIAALAGGTLAGAAHLTKA HHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHH GTRALINLSPEPVSNVVTSTAEDGLVFGGLLLALFVPLLFLVLLVGFLVLASWVLPRLWR HHHHEEECCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SVQGGFRGMATHMVSRLARSRHD HHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MLEPLSLAAGLSWGSGLRLYLTVLIAGVFGRAGFIHLPDTLSVLQSPWVIGAAALLSLAE CCCCHHHHHCCCCCCCHHHHHHHHHHHHHHCCCEEECCHHHHHHHCCHHHHHHHHHHHHH FLADKIPAFDSLWDAVHTFIRIPAGAVLAVGALGHADPAMMTIAALAGGTLAGAAHLTKA HHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHH GTRALINLSPEPVSNVVTSTAEDGLVFGGLLLALFVPLLFLVLLVGFLVLASWVLPRLWR HHHHEEECCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SVQGGFRGMATHMVSRLARSRHD HHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA