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The map label for this gene is yjbI [H]

Identifier: 186476803

GI number: 186476803

Start: 2298329

End: 2298754

Strand: Reverse

Name: yjbI [H]

Synonym: Bphy_2049

Alternate gene names: 186476803

Gene position: 2298754-2298329 (Counterclockwise)

Preceding gene: 186476804

Following gene: 186476797

Centisome position: 66.07

GC content: 64.08

Gene sequence:

>426_bases
ATGACTGATCCGATTGACGAAGCGCCGTCGCAGCCGACCGCCTTCGAACTCGTGGGCGGCGAGGCGCGCGTGCGCGAACT
CGTCGACCGCTTTTACGACCTGATGGATCTCGAAGCCGACTTCGCCCGTATCCGCAAGCTGCATCCGCCGACGCTCGAAG
GCTCGCGCGACAAGCTGTTCTGGTTCCTGTGCGGCTGGCTCGGCGGCCCCGATCACTACATCAGCCGCTTCGGTCATCCG
CGTCTGCGTGCGCGGCATCTGCCGTTTCCGATCGCGTCGGTAGAGCGCGACCAATGGCTGCGCTGCATGGCGTGGGCGAT
GGAAGACGTCGGGTTGCCCGAGCCGCTGCGCGAGCGCCTGCTGCATTCGTTCTTCGATACCGCGGACTGGATGATCAACC
AGCATTCGGCAGTGACGAAAAGATGA

Upstream 100 bases:

>100_bases
TGAGCCTGCGTCACGTGCTGATGCGGCCAGCGCTGCAATCGTTGCGCGATGCGTGACAGCGCGCGCCGCCCCTACCATCC
TTTGAGTGTGTTTTGCCCGT

Downstream 100 bases:

>100_bases
ACTCGTGCTCCGTTCCGGCAATAACTAGCCGATGTTCGCGTAGCATGTCGACCTCAGCGTAACGGCAGACATCAGCATAT
CGATGAGACGAACTTAACGC

Product: globin

Products: NA

Alternate protein names: Truncated Hb; trHbO; Hemoglobin-like protein yjbI; Truncated BHb [H]

Number of amino acids: Translated: 141; Mature: 140

Protein sequence:

>141_residues
MTDPIDEAPSQPTAFELVGGEARVRELVDRFYDLMDLEADFARIRKLHPPTLEGSRDKLFWFLCGWLGGPDHYISRFGHP
RLRARHLPFPIASVERDQWLRCMAWAMEDVGLPEPLRERLLHSFFDTADWMINQHSAVTKR

Sequences:

>Translated_141_residues
MTDPIDEAPSQPTAFELVGGEARVRELVDRFYDLMDLEADFARIRKLHPPTLEGSRDKLFWFLCGWLGGPDHYISRFGHP
RLRARHLPFPIASVERDQWLRCMAWAMEDVGLPEPLRERLLHSFFDTADWMINQHSAVTKR
>Mature_140_residues
TDPIDEAPSQPTAFELVGGEARVRELVDRFYDLMDLEADFARIRKLHPPTLEGSRDKLFWFLCGWLGGPDHYISRFGHPR
LRARHLPFPIASVERDQWLRCMAWAMEDVGLPEPLRERLLHSFFDTADWMINQHSAVTKR

Specific function: Hemoglobin-like protein that exhibits a low peroxidase activity. Its very high oxygen affinity may rule out the possibility that it is involved in oxygen transport [H]

COG id: COG2346

COG function: function code R; Truncated hemoglobins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the truncated hemoglobin family. Group II subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012292
- InterPro:   IPR009050
- InterPro:   IPR019795
- InterPro:   IPR001486 [H]

Pfam domain/function: PF01152 Bac_globin [H]

EC number: NA

Molecular weight: Translated: 16489; Mature: 16358

Theoretical pI: Translated: 6.24; Mature: 6.24

Prosite motif: PS01213 GLOBIN_FAM_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDPIDEAPSQPTAFELVGGEARVRELVDRFYDLMDLEADFARIRKLHPPTLEGSRDKLF
CCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCHHHH
WFLCGWLGGPDHYISRFGHPRLRARHLPFPIASVERDQWLRCMAWAMEDVGLPEPLRERL
HHHHHHCCCHHHHHHHCCCCCHHHCCCCCCCHHCCHHHHHHHHHHHHHHCCCCHHHHHHH
LHSFFDTADWMINQHSAVTKR
HHHHHHHHHHHHHCCHHHCCC
>Mature Secondary Structure 
TDPIDEAPSQPTAFELVGGEARVRELVDRFYDLMDLEADFARIRKLHPPTLEGSRDKLF
CCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCHHHH
WFLCGWLGGPDHYISRFGHPRLRARHLPFPIASVERDQWLRCMAWAMEDVGLPEPLRERL
HHHHHHCCCHHHHHHHCCCCCHHHCCCCCCCHHCCHHHHHHHHHHHHHHCCCCHHHHHHH
LHSFFDTADWMINQHSAVTKR
HHHHHHHHHHHHHCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]