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The map label for this gene is 186476709

Identifier: 186476709

GI number: 186476709

Start: 2196732

End: 2198141

Strand: Reverse

Name: 186476709

Synonym: Bphy_1954

Alternate gene names: NA

Gene position: 2198141-2196732 (Counterclockwise)

Preceding gene: 186476710

Following gene: 186476708

Centisome position: 63.18

GC content: 62.62

Gene sequence:

>1410_bases
ATGAGCAGTGCAGTTGCAAACCAACGCAGCCGGCTTGCAGAGGTCGGCCACTGGATGCAGCGCCACGGCGCTGCCATCCG
CTGCATCCAGTGGGTTGTCGTTGCCGTCTACGCGTTTCTGATTCTTGTGCCTGCGTTCACCGAACTGCCGGGCGACACGG
CTCATCTGTGGAGCAACCTGACGCTGGCCGCGCAGTTCGTGTTCTGGGGAATCTGGTGGCCGTTCGTACTGCTGTCGATG
GTGATGCTCGGGCGCGTATGGTGCGGCGTGCTGTGCCCCGAAGGCGCACTTGCGGAATTCGCAAGCAAATACGGACGAGG
CTGGGCAATTCCGCGCTGGATGCGCTGGGGCGGCTGGCCATTCGTCGCATTCGGTCTGACGACGATCTACGGCCAGATGG
TCAGCGTCTACCAGTATCCGAAAGCGGTCTTGCTGGTCCTGGGCGGATCTACGTTTGCCGCGATGGTCATCGGATTGCTG
TACGGTCGAGAGAAGCGCGTCTGGTGTAAATACCTGTGCCCCGTCAACGGGGTTTTTTCGCTTTTGGCGCGCCTCGCGCC
GTTTCACTACAAGGTCGACGAAGACGCGTGGCGTCGTTCGTATAAAGAAGGCGAGCACGGCCATCGCGTGATTCCGATCA
ACTGTGCGCCGCTGGTGCCGTTGCGCAATATGAAGGGCGCGTCGTCGTGCCATATGTGCGGCCGTTGCAGTGGGCATCGC
GACGCGATCGCGCTGACGTGGCGCGCGCCGTCGTCGGAAGTTGTGAATCTCGGCGACAGACAGGCGAGCGCCTGGGACAC
GGCACTGATCCTCTATGGCCTGCTCGGCATCGCAATCGGCGCCTTCCACTGGACGGGCTCGCCGTGGTTCATCGACATCA
AGCAGTCGCTCGCGACCTGGCTCGTCGATCGAGACATCATGTGGCCGCTCGACACGAACGCGCCGTGGTTCCTGTTCACG
CACTATCCGGAACAGAACGACGTGTTCTCATGGCTCGACGGCACGATGATCATCGCCTACATCCTCGCGACGGCCGCCGT
CTACGGCACCGCGCTGTTCGCGCTGCTGGCGGGTGCGACGCGCGTGCTGGGCCGCTTCTCAATGACGCGCCTGCATCATC
TGGCGCAGGCCCTGATTCCGATCGCGGGAACGGGCGTGTTCCTCGGTCTGTCGGCGACGACGCTGTCCTTGCTGAAGGCC
GAGCATGTGCCGCTCGACTGGGCATCGGATGTGCGTATCGCCATTCTCGTGATCGCGAATACCTGGAGCGCATGGCTCGC
GTGGCTCATTACGCGCCGTTATACGGCGCGGGTTTTGCGGCGCACGTTGTCGATGGTATGGTTCATGGCAGCACTGGCCG
TCGTCGATAGCGCGTGGTGGCTGATGTTCTGGTACTGGCCGGCACACTGA

Upstream 100 bases:

>100_bases
TGATGAACCTGATCACCTATGCGCTGTACTGGGCGGTCGTGTGGATCCTCATCCGCCGTTCGAAGCGCGCTCCAGCGCAA
CAGACGGCAGGGCGCGCGGC

Downstream 100 bases:

>100_bases
TCGGCGGCGCGCCGCGTATCCCCTACGCGAGGCGCCTGTGAGAACCAAACCCGTATTGACCGACGAAGACGTCCGTAAGA
TCGCCGCCGCCGCTGAAGCG

Product: putative nitrogen fixation protein VnfA

Products: NA

Alternate protein names: Regulatory Protein; Polyferredoxin-Like Protein; Polyferredoxin; Nitrogen Assimilation Regulatory Protein; Polyferredoxin-Like; Nitrogen Regulatory Protein; Ferredoxin; Polyferredoxin Protein; Sigma-54 Interaction Domain Family

Number of amino acids: Translated: 469; Mature: 468

Protein sequence:

>469_residues
MSSAVANQRSRLAEVGHWMQRHGAAIRCIQWVVVAVYAFLILVPAFTELPGDTAHLWSNLTLAAQFVFWGIWWPFVLLSM
VMLGRVWCGVLCPEGALAEFASKYGRGWAIPRWMRWGGWPFVAFGLTTIYGQMVSVYQYPKAVLLVLGGSTFAAMVIGLL
YGREKRVWCKYLCPVNGVFSLLARLAPFHYKVDEDAWRRSYKEGEHGHRVIPINCAPLVPLRNMKGASSCHMCGRCSGHR
DAIALTWRAPSSEVVNLGDRQASAWDTALILYGLLGIAIGAFHWTGSPWFIDIKQSLATWLVDRDIMWPLDTNAPWFLFT
HYPEQNDVFSWLDGTMIIAYILATAAVYGTALFALLAGATRVLGRFSMTRLHHLAQALIPIAGTGVFLGLSATTLSLLKA
EHVPLDWASDVRIAILVIANTWSAWLAWLITRRYTARVLRRTLSMVWFMAALAVVDSAWWLMFWYWPAH

Sequences:

>Translated_469_residues
MSSAVANQRSRLAEVGHWMQRHGAAIRCIQWVVVAVYAFLILVPAFTELPGDTAHLWSNLTLAAQFVFWGIWWPFVLLSM
VMLGRVWCGVLCPEGALAEFASKYGRGWAIPRWMRWGGWPFVAFGLTTIYGQMVSVYQYPKAVLLVLGGSTFAAMVIGLL
YGREKRVWCKYLCPVNGVFSLLARLAPFHYKVDEDAWRRSYKEGEHGHRVIPINCAPLVPLRNMKGASSCHMCGRCSGHR
DAIALTWRAPSSEVVNLGDRQASAWDTALILYGLLGIAIGAFHWTGSPWFIDIKQSLATWLVDRDIMWPLDTNAPWFLFT
HYPEQNDVFSWLDGTMIIAYILATAAVYGTALFALLAGATRVLGRFSMTRLHHLAQALIPIAGTGVFLGLSATTLSLLKA
EHVPLDWASDVRIAILVIANTWSAWLAWLITRRYTARVLRRTLSMVWFMAALAVVDSAWWLMFWYWPAH
>Mature_468_residues
SSAVANQRSRLAEVGHWMQRHGAAIRCIQWVVVAVYAFLILVPAFTELPGDTAHLWSNLTLAAQFVFWGIWWPFVLLSMV
MLGRVWCGVLCPEGALAEFASKYGRGWAIPRWMRWGGWPFVAFGLTTIYGQMVSVYQYPKAVLLVLGGSTFAAMVIGLLY
GREKRVWCKYLCPVNGVFSLLARLAPFHYKVDEDAWRRSYKEGEHGHRVIPINCAPLVPLRNMKGASSCHMCGRCSGHRD
AIALTWRAPSSEVVNLGDRQASAWDTALILYGLLGIAIGAFHWTGSPWFIDIKQSLATWLVDRDIMWPLDTNAPWFLFTH
YPEQNDVFSWLDGTMIIAYILATAAVYGTALFALLAGATRVLGRFSMTRLHHLAQALIPIAGTGVFLGLSATTLSLLKAE
HVPLDWASDVRIAILVIANTWSAWLAWLITRRYTARVLRRTLSMVWFMAALAVVDSAWWLMFWYWPAH

Specific function: Unknown

COG id: COG0348

COG function: function code C; Polyferredoxin

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 52782; Mature: 52651

Theoretical pI: Translated: 9.44; Mature: 9.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCC
>Mature Secondary Structure 
SSAVANQRSRLAEVGHWMQRHGAAIRCIQWVVVAVYAFLILVPAFTELPGDTAHLWSNL
CCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
TLAAQFVFWGIWWPFVLLSMVMLGRVWCGVLCPEGALAEFASKYGRGWAIPRWMRWGGWP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCHHHHCCCCH
FVAFGLTTIYGQMVSVYQYPKAVLLVLGGSTFAAMVIGLLYGREKRVWCKYLCPVNGVFS
HHHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHCCCCCCHHHHHCCHHHHHH
LLARLAPFHYKVDEDAWRRSYKEGEHGHRVIPINCAPLVPLRNMKGASSCHMCGRCSGHR
HHHHHCCCCEECCHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCC
DAIALTWRAPSSEVVNLGDRQASAWDTALILYGLLGIAIGAFHWTGSPWFIDIKQSLATW
CEEEEEEECCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHEECCCCEEEEHHHHHHHH
LVDRDIMWPLDTNAPWFLFTHYPEQNDVFSWLDGTMIIAYILATAAVYGTALFALLAGAT
HHCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RVLGRFSMTRLHHLAQALIPIAGTGVFLGLSATTLSLLKAEHVPLDWASDVRIAILVIAN
HHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHCCCCCCCCCCCEEEEEEEEC
TWSAWLAWLITRRYTARVLRRTLSMVWFMAALAVVDSAWWLMFWYWPAH
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA