Definition Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence.
Accession NC_010622
Length 3,479,187

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The map label for this gene is 186476692

Identifier: 186476692

GI number: 186476692

Start: 2181558

End: 2181923

Strand: Reverse

Name: 186476692

Synonym: Bphy_1937

Alternate gene names: NA

Gene position: 2181923-2181558 (Counterclockwise)

Preceding gene: 186476693

Following gene: 186476691

Centisome position: 62.71

GC content: 64.21

Gene sequence:

>366_bases
ATGGCCGCGCCACACGACATTTCACGACACACGATCAATCCCATGCCCGAACCGCCGCCCGTCACGGAGGCGATGGCGCG
CGCGCACGCGCGTTACTGGCGCTTCAATGTCGCGTTGATTGCAGCGTTGATGCTGATCGGCTTTTTCGTCTCGTTCGTCG
TGCCGCTGATCGCGCGCAGCCTTGTCCAGGTGCGCTTCGCGGGCTTCAGCCTGCCGTTCTACATGGGCGCGCAGGGTGCG
ATCGTCGTGTACCTGGTGCTGATCGTCGTATATATCCTGCTGATGCAACGCGCGGACGCGACGCTTCAACGCGTGCTCGA
AGCCGGCGCGCAGGACGACCTCGCCGGGCGTACAGCCGACCGATGA

Upstream 100 bases:

>100_bases
ATGGAGCGCCACGCCGCTTTGTAGGGCGTTCGAGCCGCGAGCAGTTCGTTGCGCGGACAACCCCGATTGCCGATGCCACA
CGTTTTTGATAAATAGGCGC

Downstream 100 bases:

>100_bases
AACTCGCGCATCGGCTCATCCGTTCGTATTCGTTTTACACGCTTGGCTTTTTCGCGTTCATCTATCTGCTCTGGCGCATC
GAGGCGGCGAGCGGGCCGGG

Product: membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 121; Mature: 120

Protein sequence:

>121_residues
MAAPHDISRHTINPMPEPPPVTEAMARAHARYWRFNVALIAALMLIGFFVSFVVPLIARSLVQVRFAGFSLPFYMGAQGA
IVVYLVLIVVYILLMQRADATLQRVLEAGAQDDLAGRTADR

Sequences:

>Translated_121_residues
MAAPHDISRHTINPMPEPPPVTEAMARAHARYWRFNVALIAALMLIGFFVSFVVPLIARSLVQVRFAGFSLPFYMGAQGA
IVVYLVLIVVYILLMQRADATLQRVLEAGAQDDLAGRTADR
>Mature_120_residues
AAPHDISRHTINPMPEPPPVTEAMARAHARYWRFNVALIAALMLIGFFVSFVVPLIARSLVQVRFAGFSLPFYMGAQGAI
VVYLVLIVVYILLMQRADATLQRVLEAGAQDDLAGRTADR

Specific function: Unknown

COG id: COG4327

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13367; Mature: 13236

Theoretical pI: Translated: 9.66; Mature: 9.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAAPHDISRHTINPMPEPPPVTEAMARAHARYWRFNVALIAALMLIGFFVSFVVPLIARS
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LVQVRFAGFSLPFYMGAQGAIVVYLVLIVVYILLMQRADATLQRVLEAGAQDDLAGRTAD
HHHHHHHCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCC
R
C
>Mature Secondary Structure 
AAPHDISRHTINPMPEPPPVTEAMARAHARYWRFNVALIAALMLIGFFVSFVVPLIARS
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LVQVRFAGFSLPFYMGAQGAIVVYLVLIVVYILLMQRADATLQRVLEAGAQDDLAGRTAD
HHHHHHHCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCC
R
C

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA