Definition Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence.
Accession NC_010622
Length 3,479,187

Click here to switch to the map view.

The map label for this gene is 186476689

Identifier: 186476689

GI number: 186476689

Start: 2178361

End: 2178765

Strand: Reverse

Name: 186476689

Synonym: Bphy_1934

Alternate gene names: NA

Gene position: 2178765-2178361 (Counterclockwise)

Preceding gene: 186476690

Following gene: 186476688

Centisome position: 62.62

GC content: 60.25

Gene sequence:

>405_bases
GTGCGAGCGATGATGACGATGACTGATCTTGACAGCTACCGCGCCACGCACGCGCGTGCGCTCGGCTTTATCAACGACTG
GCGACCGCATGCGAAAACACGCGCACTTCAAAAACCGCCGCCAGCCATCGCAACAAATGGTGTAGAACGTCCGGTATCGG
CAACAGGCGCGCGAGCGCAAGCGGAGGCCGGTATGGACGAATGGCTGGCGGGATATCGCACTTTCGAACGCATCCGCAAC
GATATCGAAACAGGGTTGATTCACTGGGTTGAGCGGGATGATTTGCGCTGTCCTTTCCGGTGGCGACAGTCTGAAGGGCG
CGTGGACGACGACGAGAGCGACGATTGGGACGAGGCTGGCGACTGTCCCGCCAGCACGCCGCGCATCTGTAATCGAGGCA
AGTAG

Upstream 100 bases:

>100_bases
GACGCCCTGGGCTGCATCGCGGACACGCTTGACGAACTCGACGACGGCGAGATCGACGAGCAGACGGCGTTCAGGAAAAT
CACGTCCATCGTCAAGACGC

Downstream 100 bases:

>100_bases
ACGGGGCACATGGTGAAGGGGTTCAGGACAGGCGGACGGGTTGCCGGGACGCCAAACCGCACCACCACCGAGATTCGCGC
GCTGGCGGGCCAGTACGGCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 134; Mature: 134

Protein sequence:

>134_residues
MRAMMTMTDLDSYRATHARALGFINDWRPHAKTRALQKPPPAIATNGVERPVSATGARAQAEAGMDEWLAGYRTFERIRN
DIETGLIHWVERDDLRCPFRWRQSEGRVDDDESDDWDEAGDCPASTPRICNRGK

Sequences:

>Translated_134_residues
MRAMMTMTDLDSYRATHARALGFINDWRPHAKTRALQKPPPAIATNGVERPVSATGARAQAEAGMDEWLAGYRTFERIRN
DIETGLIHWVERDDLRCPFRWRQSEGRVDDDESDDWDEAGDCPASTPRICNRGK
>Mature_134_residues
MRAMMTMTDLDSYRATHARALGFINDWRPHAKTRALQKPPPAIATNGVERPVSATGARAQAEAGMDEWLAGYRTFERIRN
DIETGLIHWVERDDLRCPFRWRQSEGRVDDDESDDWDEAGDCPASTPRICNRGK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15275; Mature: 15275

Theoretical pI: Translated: 5.72; Mature: 5.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRAMMTMTDLDSYRATHARALGFINDWRPHAKTRALQKPPPAIATNGVERPVSATGARAQ
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCHHH
AEAGMDEWLAGYRTFERIRNDIETGLIHWVERDDLRCPFRWRQSEGRVDDDESDDWDEAG
HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
DCPASTPRICNRGK
CCCCCCCCCCCCCC
>Mature Secondary Structure
MRAMMTMTDLDSYRATHARALGFINDWRPHAKTRALQKPPPAIATNGVERPVSATGARAQ
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCHHH
AEAGMDEWLAGYRTFERIRNDIETGLIHWVERDDLRCPFRWRQSEGRVDDDESDDWDEAG
HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
DCPASTPRICNRGK
CCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA