| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is 186476689
Identifier: 186476689
GI number: 186476689
Start: 2178361
End: 2178765
Strand: Reverse
Name: 186476689
Synonym: Bphy_1934
Alternate gene names: NA
Gene position: 2178765-2178361 (Counterclockwise)
Preceding gene: 186476690
Following gene: 186476688
Centisome position: 62.62
GC content: 60.25
Gene sequence:
>405_bases GTGCGAGCGATGATGACGATGACTGATCTTGACAGCTACCGCGCCACGCACGCGCGTGCGCTCGGCTTTATCAACGACTG GCGACCGCATGCGAAAACACGCGCACTTCAAAAACCGCCGCCAGCCATCGCAACAAATGGTGTAGAACGTCCGGTATCGG CAACAGGCGCGCGAGCGCAAGCGGAGGCCGGTATGGACGAATGGCTGGCGGGATATCGCACTTTCGAACGCATCCGCAAC GATATCGAAACAGGGTTGATTCACTGGGTTGAGCGGGATGATTTGCGCTGTCCTTTCCGGTGGCGACAGTCTGAAGGGCG CGTGGACGACGACGAGAGCGACGATTGGGACGAGGCTGGCGACTGTCCCGCCAGCACGCCGCGCATCTGTAATCGAGGCA AGTAG
Upstream 100 bases:
>100_bases GACGCCCTGGGCTGCATCGCGGACACGCTTGACGAACTCGACGACGGCGAGATCGACGAGCAGACGGCGTTCAGGAAAAT CACGTCCATCGTCAAGACGC
Downstream 100 bases:
>100_bases ACGGGGCACATGGTGAAGGGGTTCAGGACAGGCGGACGGGTTGCCGGGACGCCAAACCGCACCACCACCGAGATTCGCGC GCTGGCGGGCCAGTACGGCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 134; Mature: 134
Protein sequence:
>134_residues MRAMMTMTDLDSYRATHARALGFINDWRPHAKTRALQKPPPAIATNGVERPVSATGARAQAEAGMDEWLAGYRTFERIRN DIETGLIHWVERDDLRCPFRWRQSEGRVDDDESDDWDEAGDCPASTPRICNRGK
Sequences:
>Translated_134_residues MRAMMTMTDLDSYRATHARALGFINDWRPHAKTRALQKPPPAIATNGVERPVSATGARAQAEAGMDEWLAGYRTFERIRN DIETGLIHWVERDDLRCPFRWRQSEGRVDDDESDDWDEAGDCPASTPRICNRGK >Mature_134_residues MRAMMTMTDLDSYRATHARALGFINDWRPHAKTRALQKPPPAIATNGVERPVSATGARAQAEAGMDEWLAGYRTFERIRN DIETGLIHWVERDDLRCPFRWRQSEGRVDDDESDDWDEAGDCPASTPRICNRGK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15275; Mature: 15275
Theoretical pI: Translated: 5.72; Mature: 5.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 6.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRAMMTMTDLDSYRATHARALGFINDWRPHAKTRALQKPPPAIATNGVERPVSATGARAQ CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCHHH AEAGMDEWLAGYRTFERIRNDIETGLIHWVERDDLRCPFRWRQSEGRVDDDESDDWDEAG HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC DCPASTPRICNRGK CCCCCCCCCCCCCC >Mature Secondary Structure MRAMMTMTDLDSYRATHARALGFINDWRPHAKTRALQKPPPAIATNGVERPVSATGARAQ CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCHHH AEAGMDEWLAGYRTFERIRNDIETGLIHWVERDDLRCPFRWRQSEGRVDDDESDDWDEAG HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC DCPASTPRICNRGK CCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA