| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is 186476683
Identifier: 186476683
GI number: 186476683
Start: 2171359
End: 2172348
Strand: Reverse
Name: 186476683
Synonym: Bphy_1928
Alternate gene names: NA
Gene position: 2172348-2171359 (Counterclockwise)
Preceding gene: 186476684
Following gene: 186476680
Centisome position: 62.44
GC content: 63.03
Gene sequence:
>990_bases ATGTCTGCCCCATTGACGCTGGACGATATGCAACGGCTGGCCGCTCGCCACGGTGGGCGGTGCATATCGACCGACTACCG GAATATCCATACGGAACTCCGCTGGCGATGTGTGCGGGGCCACGAGTGGGAGGCGACACCATTTAGTGTGCGTCAGGGCA AGTGGTGTGCGACTTGCGCCCACGACGAACATAGCGCGGTCTGGCTCCCTGCAATGCACACACTCGCTCGTGAACGCGGC GGCAAATGCCTTTCCGAAACCTACGTGAACAGCCGCACAAAACTGTGGTGGGAATGTCATCAAGGCCACACGTGGGAGGC CACGCCCGCCAGCATACGTGTGGCCGGGGCGTGGTGTCCGGCGTGTGCCGCTGATAGCCGGAAGGGGACCATGAATGACA TGCATGCGCTCGCAGCGAGGCATGACGGCCAGTGCCTGTCTACGGAGTACGCCGGTCCGACAGGCAAGTTACGCTGGCGC TGTGCCGAAGGTCACGAATGGATCACGTCCCCCGCCAGGGTACGCAACGGCTTCTGGTGCGCAATCTGTGCGAAGCAGGG ACGCCGCTCATCGAGGCTTGAGGACATGCACCTGTTGGCCGCGAGTCGCGGTGGCAAATGCCTGTCGGACACCTATGAAA CGAGCGCGCGTCTGCTGCGCTGGGAATGCTGCCGTGGACACCGCTGGCTGGCCGCGCCCGCAAATATCAAGGGTGGAACA TGGTGCCCGAAGTGCGCCCATGCGGAACGCTCGAACCATACCATTGGGGAAATGAACGAGATCGCTCGCGAGCGTGGCGG GCGCTGCCTCTCGGACGCCTACGTGAACGTCACGACGAAGCTCGAATGGGAGTGCGCACGGGGCCATGCCTGGTCAACGG CCCCGATGACAGTGCTGGCGGGTCACTGGTGCCCGGCGTGCAAATATTTGGATCAATGCGTATCGGACGAGGCCAGGCGC AAGTATCTGGCCGTTGCCGGGTGCCCTTGA
Upstream 100 bases:
>100_bases CGAGGACGGGCGCGCGAGCGTACTCGACGGCGACCAGGTGCTCTGTCCATGCGGGGCCAATCATGTCAAGGCAAGTCCCG ATGCGGGATGTTCGACCTGA
Downstream 100 bases:
>100_bases CCCGGCGCAGCAAAGACCGGGCATGTAACGTTAGCCGCGCCTCGTGCGCGGCTTTTCATTGGCGTATGTTCAATACTCGA AACGAGTCCATGTAGCTTTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 329; Mature: 328
Protein sequence:
>329_residues MSAPLTLDDMQRLAARHGGRCISTDYRNIHTELRWRCVRGHEWEATPFSVRQGKWCATCAHDEHSAVWLPAMHTLARERG GKCLSETYVNSRTKLWWECHQGHTWEATPASIRVAGAWCPACAADSRKGTMNDMHALAARHDGQCLSTEYAGPTGKLRWR CAEGHEWITSPARVRNGFWCAICAKQGRRSSRLEDMHLLAASRGGKCLSDTYETSARLLRWECCRGHRWLAAPANIKGGT WCPKCAHAERSNHTIGEMNEIARERGGRCLSDAYVNVTTKLEWECARGHAWSTAPMTVLAGHWCPACKYLDQCVSDEARR KYLAVAGCP
Sequences:
>Translated_329_residues MSAPLTLDDMQRLAARHGGRCISTDYRNIHTELRWRCVRGHEWEATPFSVRQGKWCATCAHDEHSAVWLPAMHTLARERG GKCLSETYVNSRTKLWWECHQGHTWEATPASIRVAGAWCPACAADSRKGTMNDMHALAARHDGQCLSTEYAGPTGKLRWR CAEGHEWITSPARVRNGFWCAICAKQGRRSSRLEDMHLLAASRGGKCLSDTYETSARLLRWECCRGHRWLAAPANIKGGT WCPKCAHAERSNHTIGEMNEIARERGGRCLSDAYVNVTTKLEWECARGHAWSTAPMTVLAGHWCPACKYLDQCVSDEARR KYLAVAGCP >Mature_328_residues SAPLTLDDMQRLAARHGGRCISTDYRNIHTELRWRCVRGHEWEATPFSVRQGKWCATCAHDEHSAVWLPAMHTLARERGG KCLSETYVNSRTKLWWECHQGHTWEATPASIRVAGAWCPACAADSRKGTMNDMHALAARHDGQCLSTEYAGPTGKLRWRC AEGHEWITSPARVRNGFWCAICAKQGRRSSRLEDMHLLAASRGGKCLSDTYETSARLLRWECCRGHRWLAAPANIKGGTW CPKCAHAERSNHTIGEMNEIARERGGRCLSDAYVNVTTKLEWECARGHAWSTAPMTVLAGHWCPACKYLDQCVSDEARRK YLAVAGCP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36951; Mature: 36820
Theoretical pI: Translated: 8.50; Mature: 8.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
7.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 9.4 %Cys+Met (Translated Protein) 7.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 9.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAPLTLDDMQRLAARHGGRCISTDYRNIHTELRWRCVRGHEWEATPFSVRQGKWCATCA CCCCCCHHHHHHHHHHHCCEEEECCHHHHHHHHEEEEECCCCCCCCCCCCCCCCEEEEEC HDEHSAVWLPAMHTLARERGGKCLSETYVNSRTKLWWECHQGHTWEATPASIRVAGAWCP CCCCCEEEHHHHHHHHHHHCCCHHHHHHHCCCCEEEEEECCCCCCCCCCCEEEEEECCCC ACAADSRKGTMNDMHALAARHDGQCLSTEYAGPTGKLRWRCAEGHEWITSPARVRNGFWC CCCCCCCCCCHHHHHHHHHHCCCCEEECCCCCCCCCEEEEECCCCCHHCCHHHHCCCEEE AICAKQGRRSSRLEDMHLLAASRGGKCLSDTYETSARLLRWECCRGHRWLAAPANIKGGT EEECCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCC WCPKCAHAERSNHTIGEMNEIARERGGRCLSDAYVNVTTKLEWECARGHAWSTAPMTVLA CCCCCCCCCCCCCCHHHHHHHHHHHCCCEEECCEEEEEEEEEEEECCCCCCCCCCHHHEE GHWCPACKYLDQCVSDEARRKYLAVAGCP CCCCHHHHHHHHHHCHHHHHCEEEEECCC >Mature Secondary Structure SAPLTLDDMQRLAARHGGRCISTDYRNIHTELRWRCVRGHEWEATPFSVRQGKWCATCA CCCCCHHHHHHHHHHHCCEEEECCHHHHHHHHEEEEECCCCCCCCCCCCCCCCEEEEEC HDEHSAVWLPAMHTLARERGGKCLSETYVNSRTKLWWECHQGHTWEATPASIRVAGAWCP CCCCCEEEHHHHHHHHHHHCCCHHHHHHHCCCCEEEEEECCCCCCCCCCCEEEEEECCCC ACAADSRKGTMNDMHALAARHDGQCLSTEYAGPTGKLRWRCAEGHEWITSPARVRNGFWC CCCCCCCCCCHHHHHHHHHHCCCCEEECCCCCCCCCEEEEECCCCCHHCCHHHHCCCEEE AICAKQGRRSSRLEDMHLLAASRGGKCLSDTYETSARLLRWECCRGHRWLAAPANIKGGT EEECCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCC WCPKCAHAERSNHTIGEMNEIARERGGRCLSDAYVNVTTKLEWECARGHAWSTAPMTVLA CCCCCCCCCCCCCCHHHHHHHHHHHCCCEEECCEEEEEEEEEEEECCCCCCCCCCHHHEE GHWCPACKYLDQCVSDEARRKYLAVAGCP CCCCHHHHHHHHHHCHHHHHCEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA