| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
Click here to switch to the map view.
The map label for this gene is 186476658
Identifier: 186476658
GI number: 186476658
Start: 2154982
End: 2155512
Strand: Reverse
Name: 186476658
Synonym: Bphy_1903
Alternate gene names: NA
Gene position: 2155512-2154982 (Counterclockwise)
Preceding gene: 186476659
Following gene: 186476657
Centisome position: 61.95
GC content: 65.16
Gene sequence:
>531_bases ATGACGAAGCGAGCGACATCACTGCGATACCCGGAAGGCACGACGCAAGTCGGCACGGCGCGCGTGCGCGAGGCGTCGCT GGCGACGATGACGACGGCGCAACGCCGGATCTACGAAAAGACGGGCGTGCCGCCGCAGACGGCCGCGATCGACGTCGACG ACCCGTTCGATCCGTCGCTGATCCGGCCGGCGACGCCCGCGAAGAAGCCGTCGAAGTACCGAAACGAGAAGTGCGAGTCG GGCGGCATCAAGTTCGACAGCAAGCGGGAAATGATGCGCTGGCACGACCTGGTGCAGATGCAGGCGCGCGGCGAGATCAG CGAACTCGAGTTGCAGGTGCCGTTCATTCTCGCCGAGCCGGTCATGATCGGCGGCCGCAAGCGCCCGGCGCTGCGATACG TCGCCGACTTCGTCTACGAGCGCAACGGTGAGCAGGTGATCGAAGACGTGAAGGGCCGGATAACCGAGGGGTACCGCATC AAGCGCCATTTGATGGCCGCGCGGGGACTGAAGATCGTGGAGGTGAAGTGA
Upstream 100 bases:
>100_bases CATGGGATCTCGTCGAGTCGGTACGGAAGAAGTTCGGCGATAGGGCGGCAGAGAGGCAAGAGCGCGAACTGCGCAATTAC GTGGACAGCAACAAACCAGC
Downstream 100 bases:
>100_bases TGGGGAATCGATGGTCTGACGAAGAGCGGGAAATCATCCGCGAGATCTGGAGGAGCCCGGTGTACCTGAAAACCGATTTC GACAGGCTTCCGGGTCGCAC
Product: hypothetical protein
Products: NA
Alternate protein names: FAA1 Long-Chain Acyl-CoA Synthetase
Number of amino acids: Translated: 176; Mature: 175
Protein sequence:
>176_residues MTKRATSLRYPEGTTQVGTARVREASLATMTTAQRRIYEKTGVPPQTAAIDVDDPFDPSLIRPATPAKKPSKYRNEKCES GGIKFDSKREMMRWHDLVQMQARGEISELELQVPFILAEPVMIGGRKRPALRYVADFVYERNGEQVIEDVKGRITEGYRI KRHLMAARGLKIVEVK
Sequences:
>Translated_176_residues MTKRATSLRYPEGTTQVGTARVREASLATMTTAQRRIYEKTGVPPQTAAIDVDDPFDPSLIRPATPAKKPSKYRNEKCES GGIKFDSKREMMRWHDLVQMQARGEISELELQVPFILAEPVMIGGRKRPALRYVADFVYERNGEQVIEDVKGRITEGYRI KRHLMAARGLKIVEVK >Mature_175_residues TKRATSLRYPEGTTQVGTARVREASLATMTTAQRRIYEKTGVPPQTAAIDVDDPFDPSLIRPATPAKKPSKYRNEKCESG GIKFDSKREMMRWHDLVQMQARGEISELELQVPFILAEPVMIGGRKRPALRYVADFVYERNGEQVIEDVKGRITEGYRIK RHLMAARGLKIVEVK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19991; Mature: 19860
Theoretical pI: Translated: 10.31; Mature: 10.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKRATSLRYPEGTTQVGTARVREASLATMTTAQRRIYEKTGVPPQTAAIDVDDPFDPSL CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCC IRPATPAKKPSKYRNEKCESGGIKFDSKREMMRWHDLVQMQARGEISELELQVPFILAEP CCCCCCCCCCHHHHHHHHCCCCCEECCHHHHHHHHHHHHHHHCCCHHHEEEECCEEEECC VMIGGRKRPALRYVADFVYERNGEQVIEDVKGRITEGYRIKRHLMAARGLKIVEVK EEECCCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHCCCEEEEEC >Mature Secondary Structure TKRATSLRYPEGTTQVGTARVREASLATMTTAQRRIYEKTGVPPQTAAIDVDDPFDPSL CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCC IRPATPAKKPSKYRNEKCESGGIKFDSKREMMRWHDLVQMQARGEISELELQVPFILAEP CCCCCCCCCCHHHHHHHHCCCCCEECCHHHHHHHHHHHHHHHCCCHHHEEEECCEEEECC VMIGGRKRPALRYVADFVYERNGEQVIEDVKGRITEGYRIKRHLMAARGLKIVEVK EEECCCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA