Definition Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence.
Accession NC_010622
Length 3,479,187

Click here to switch to the map view.

The map label for this gene is 186476630

Identifier: 186476630

GI number: 186476630

Start: 2134842

End: 2136644

Strand: Reverse

Name: 186476630

Synonym: Bphy_1875

Alternate gene names: NA

Gene position: 2136644-2134842 (Counterclockwise)

Preceding gene: 186476631

Following gene: 186476629

Centisome position: 61.41

GC content: 62.62

Gene sequence:

>1803_bases
ATGGCAGCGAGCACGCCATTCGTTGTGACGATCACCGCGGTCGACAAGGCTACGGCATCCGTCCAGAAGATCAAGGCGTC
GCTTGCGAGCGTCACGAAGCCCGCTTCGGACCTGAAAGCGTCGTTCGCGAGCTTCAGCAAGGAAGCGGGCCTCGATCGCG
TCGCGAAGTCGATGAAGTCCGTTGGCACGGCTGCCGCCGATACCGCGCGACAGGTCGCGTCCGTCATTACGCCGCTGACG
ACGATCGCAGGCATCGGATCGATTGCCGGCATAGCGCTGCTCGCGAACGAATGGGGCAAGTTCGGCGCCGAGGTGCAGCG
TACGTCGGGCGTGCTCGGCGTGTCGACTCAGGATCTACAGGCGTTTCGCGGCGCTGCGAAGCTCGCCGGTCTCTCGGCCG
ATGACATGACCGGAAGCCTGAAGTCGCTCGGTCGCACGATCGAGGACGCCACATACGGGCGAAATCAGGACGCGCTCGTC
ATGATGCAGAAGTTCGGCATCACGCTGCATCGCACGAAGGATGGCGCCGTCGACGCGACGCGCGCACTGAAAGAGGTGGC
GAACGCCATCGTCGCCCAGAAAGGCAACGTGCAGGCTCAAGGCCTCATTGCCGGAGCGTTTGGTGTGGAATCTCTGCTTC
CTTTGCTGCAAAAAGGGGAGAAGGGTATCGACGAGTTCGTCAATCGCGCGCGGTCGATGGGCCTTGTGTTCGATGACAAG
CAACTCGCGCGCGGTCAGCAGTTCAACGAGAACATGCTCAAGCTCGAAGCGTCGGCCACGCGGTTGAAGTACTCGTTCGG
TGATGCGCTTGCGCCCGCGGTGCAGCGCGTACTCGACGTTGTTGGACGCCTCGTCGATAAATATGGCGACGTGGTCGCCT
CGAAGGTGTCCGAGTACGTCGAGAAGTTCGCGAACTGGATCGATCACGTCGACTGGGACAAGACCACGAGCGAGATCGGA
AAATTCGTCGATGCCATTGGCGGCGTGAAGGGGATTGCTATCGCGATCGCCGCGATTTCGTTCGCGGGCCCGATCGCAAG
TGTGCTCAGCCTGATCTCGAATCTGACGCTGCTCGCAACTACGACGGTGCCGACGGCCGTGGCGGCGCTTGCGCGGCTCG
CAGGCGGCCCGATCATGGCAGCTGTTCTCGCTCTGCTGCATTCAAAGGACCTGAATACCGGTGAAGACGACTATCTGAAG
CAGCATCAGGCGCAGCCAGGCCAGCAATGGCAGGGTGACCCAATCGGCGATCGTCGGCGCGCGGGTGCCGCAGACGATGC
TCAAACCGCAGGCGTCGTCGATCGGTTGACGAAGATGGGCTGGTCGAAGGAGCAGGCCGCTGGTCTGGCGGCCAACTTCT
GGCAAGAGAGCCTGTTCAATCCTAATGCTGTAGGTGACAACGGCCACGCATATGGCATCGGACAGTGGCATGAAGATCGG
CAGGCTGAATTCAAGAAGCTGTTCGGCACCGACATCCGTAAGTCGACGCTGGACCAGCAGCTTCAATTCGCGGATTACGA
GCTGCGCCGCGGCAACGAACAGAAGGCAGGGCGCGCGCTGATGGGCGCGTCTTCGGCGCAGGACGCCGGCAGCATCGTGT
CGCGTCTGTACGAGCGCCCGGCCGATGCGGCAGGCGAAGCGGCGCGGCGCGGCCAGATGGCGGCGGCGATAGACGGCAAG
GTTCACGTGCACGTCGACATTCCGAACGCTCCGCCGGGCACGAAAGCATCAGTGCGCGCTAGCGGCGGCGCAACCGCGTC
GGCACGCGTCGGCACATCGAACGTTATTGGACCATCGGTATGA

Upstream 100 bases:

>100_bases
TCTTCCGCTGGGGGCCGCACGAGGCATGGACGTTGCCTTTGTCGCGTCTCGTCTGGTGGCTGGGGCAAGCTGAACGCATC
AAAAAGCAAATGGAGTCGTG

Downstream 100 bases:

>100_bases
GCACCGCATCCACGATTGGCAACGCTGTCGGAAGTATCGGCGGCGTCGCATCCGCAGCGGGCGCGGCGGCCAGTGATCTC
GCCAAGCTGTTCAATGGTGG

Product: hypothetical protein

Products: NA

Alternate protein names: Phage Related Tail Protein; Hypothethical Protein; Lambda Family Phage Tail Tape Measure Protein

Number of amino acids: Translated: 600; Mature: 599

Protein sequence:

>600_residues
MAASTPFVVTITAVDKATASVQKIKASLASVTKPASDLKASFASFSKEAGLDRVAKSMKSVGTAAADTARQVASVITPLT
TIAGIGSIAGIALLANEWGKFGAEVQRTSGVLGVSTQDLQAFRGAAKLAGLSADDMTGSLKSLGRTIEDATYGRNQDALV
MMQKFGITLHRTKDGAVDATRALKEVANAIVAQKGNVQAQGLIAGAFGVESLLPLLQKGEKGIDEFVNRARSMGLVFDDK
QLARGQQFNENMLKLEASATRLKYSFGDALAPAVQRVLDVVGRLVDKYGDVVASKVSEYVEKFANWIDHVDWDKTTSEIG
KFVDAIGGVKGIAIAIAAISFAGPIASVLSLISNLTLLATTTVPTAVAALARLAGGPIMAAVLALLHSKDLNTGEDDYLK
QHQAQPGQQWQGDPIGDRRRAGAADDAQTAGVVDRLTKMGWSKEQAAGLAANFWQESLFNPNAVGDNGHAYGIGQWHEDR
QAEFKKLFGTDIRKSTLDQQLQFADYELRRGNEQKAGRALMGASSAQDAGSIVSRLYERPADAAGEAARRGQMAAAIDGK
VHVHVDIPNAPPGTKASVRASGGATASARVGTSNVIGPSV

Sequences:

>Translated_600_residues
MAASTPFVVTITAVDKATASVQKIKASLASVTKPASDLKASFASFSKEAGLDRVAKSMKSVGTAAADTARQVASVITPLT
TIAGIGSIAGIALLANEWGKFGAEVQRTSGVLGVSTQDLQAFRGAAKLAGLSADDMTGSLKSLGRTIEDATYGRNQDALV
MMQKFGITLHRTKDGAVDATRALKEVANAIVAQKGNVQAQGLIAGAFGVESLLPLLQKGEKGIDEFVNRARSMGLVFDDK
QLARGQQFNENMLKLEASATRLKYSFGDALAPAVQRVLDVVGRLVDKYGDVVASKVSEYVEKFANWIDHVDWDKTTSEIG
KFVDAIGGVKGIAIAIAAISFAGPIASVLSLISNLTLLATTTVPTAVAALARLAGGPIMAAVLALLHSKDLNTGEDDYLK
QHQAQPGQQWQGDPIGDRRRAGAADDAQTAGVVDRLTKMGWSKEQAAGLAANFWQESLFNPNAVGDNGHAYGIGQWHEDR
QAEFKKLFGTDIRKSTLDQQLQFADYELRRGNEQKAGRALMGASSAQDAGSIVSRLYERPADAAGEAARRGQMAAAIDGK
VHVHVDIPNAPPGTKASVRASGGATASARVGTSNVIGPSV
>Mature_599_residues
AASTPFVVTITAVDKATASVQKIKASLASVTKPASDLKASFASFSKEAGLDRVAKSMKSVGTAAADTARQVASVITPLTT
IAGIGSIAGIALLANEWGKFGAEVQRTSGVLGVSTQDLQAFRGAAKLAGLSADDMTGSLKSLGRTIEDATYGRNQDALVM
MQKFGITLHRTKDGAVDATRALKEVANAIVAQKGNVQAQGLIAGAFGVESLLPLLQKGEKGIDEFVNRARSMGLVFDDKQ
LARGQQFNENMLKLEASATRLKYSFGDALAPAVQRVLDVVGRLVDKYGDVVASKVSEYVEKFANWIDHVDWDKTTSEIGK
FVDAIGGVKGIAIAIAAISFAGPIASVLSLISNLTLLATTTVPTAVAALARLAGGPIMAAVLALLHSKDLNTGEDDYLKQ
HQAQPGQQWQGDPIGDRRRAGAADDAQTAGVVDRLTKMGWSKEQAAGLAANFWQESLFNPNAVGDNGHAYGIGQWHEDRQ
AEFKKLFGTDIRKSTLDQQLQFADYELRRGNEQKAGRALMGASSAQDAGSIVSRLYERPADAAGEAARRGQMAAAIDGKV
HVHVDIPNAPPGTKASVRASGGATASARVGTSNVIGPSV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 62870; Mature: 62739

Theoretical pI: Translated: 9.60; Mature: 9.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAASTPFVVTITAVDKATASVQKIKASLASVTKPASDLKASFASFSKEAGLDRVAKSMKS
CCCCCCEEEEEEECHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHH
VGTAAADTARQVASVITPLTTIAGIGSIAGIALLANEWGKFGAEVQRTSGVLGVSTQDLQ
HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCEECCCHHHHH
AFRGAAKLAGLSADDMTGSLKSLGRTIEDATYGRNQDALVMMQKFGITLHRTKDGAVDAT
HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCEEEECCCCCHHHH
RALKEVANAIVAQKGNVQAQGLIAGAFGVESLLPLLQKGEKGIDEFVNRARSMGLVFDDK
HHHHHHHHHHHHCCCCCCCCEEEEHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCEECCH
QLARGQQFNENMLKLEASATRLKYSFGDALAPAVQRVLDVVGRLVDKYGDVVASKVSEYV
HHHCCCHHCCHHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EKFANWIDHVDWDKTTSEIGKFVDAIGGVKGIAIAIAAISFAGPIASVLSLISNLTLLAT
HHHHHHHHCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEH
TTVPTAVAALARLAGGPIMAAVLALLHSKDLNTGEDDYLKQHQAQPGQQWQGDPIGDRRR
HHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCHHC
AGAADDAQTAGVVDRLTKMGWSKEQAAGLAANFWQESLFNPNAVGDNGHAYGIGQWHEDR
CCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCEECCCCCCHHH
QAEFKKLFGTDIRKSTLDQQLQFADYELRRGNEQKAGRALMGASSAQDAGSIVSRLYERP
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCHHHHHHHHHHHCC
ADAAGEAARRGQMAAAIDGKVHVHVDIPNAPPGTKASVRASGGATASARVGTSNVIGPSV
CCHHHHHHHCCCEEEEECCEEEEEEECCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
AASTPFVVTITAVDKATASVQKIKASLASVTKPASDLKASFASFSKEAGLDRVAKSMKS
CCCCCEEEEEEECHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHH
VGTAAADTARQVASVITPLTTIAGIGSIAGIALLANEWGKFGAEVQRTSGVLGVSTQDLQ
HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCEECCCHHHHH
AFRGAAKLAGLSADDMTGSLKSLGRTIEDATYGRNQDALVMMQKFGITLHRTKDGAVDAT
HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCEEEECCCCCHHHH
RALKEVANAIVAQKGNVQAQGLIAGAFGVESLLPLLQKGEKGIDEFVNRARSMGLVFDDK
HHHHHHHHHHHHCCCCCCCCEEEEHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCEECCH
QLARGQQFNENMLKLEASATRLKYSFGDALAPAVQRVLDVVGRLVDKYGDVVASKVSEYV
HHHCCCHHCCHHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EKFANWIDHVDWDKTTSEIGKFVDAIGGVKGIAIAIAAISFAGPIASVLSLISNLTLLAT
HHHHHHHHCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEH
TTVPTAVAALARLAGGPIMAAVLALLHSKDLNTGEDDYLKQHQAQPGQQWQGDPIGDRRR
HHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCHHC
AGAADDAQTAGVVDRLTKMGWSKEQAAGLAANFWQESLFNPNAVGDNGHAYGIGQWHEDR
CCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCEECCCCCCHHH
QAEFKKLFGTDIRKSTLDQQLQFADYELRRGNEQKAGRALMGASSAQDAGSIVSRLYERP
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCHHHHHHHHHHHCC
ADAAGEAARRGQMAAAIDGKVHVHVDIPNAPPGTKASVRASGGATASARVGTSNVIGPSV
CCHHHHHHHCCCEEEEECCEEEEEEECCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA