| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is 186476630
Identifier: 186476630
GI number: 186476630
Start: 2134842
End: 2136644
Strand: Reverse
Name: 186476630
Synonym: Bphy_1875
Alternate gene names: NA
Gene position: 2136644-2134842 (Counterclockwise)
Preceding gene: 186476631
Following gene: 186476629
Centisome position: 61.41
GC content: 62.62
Gene sequence:
>1803_bases ATGGCAGCGAGCACGCCATTCGTTGTGACGATCACCGCGGTCGACAAGGCTACGGCATCCGTCCAGAAGATCAAGGCGTC GCTTGCGAGCGTCACGAAGCCCGCTTCGGACCTGAAAGCGTCGTTCGCGAGCTTCAGCAAGGAAGCGGGCCTCGATCGCG TCGCGAAGTCGATGAAGTCCGTTGGCACGGCTGCCGCCGATACCGCGCGACAGGTCGCGTCCGTCATTACGCCGCTGACG ACGATCGCAGGCATCGGATCGATTGCCGGCATAGCGCTGCTCGCGAACGAATGGGGCAAGTTCGGCGCCGAGGTGCAGCG TACGTCGGGCGTGCTCGGCGTGTCGACTCAGGATCTACAGGCGTTTCGCGGCGCTGCGAAGCTCGCCGGTCTCTCGGCCG ATGACATGACCGGAAGCCTGAAGTCGCTCGGTCGCACGATCGAGGACGCCACATACGGGCGAAATCAGGACGCGCTCGTC ATGATGCAGAAGTTCGGCATCACGCTGCATCGCACGAAGGATGGCGCCGTCGACGCGACGCGCGCACTGAAAGAGGTGGC GAACGCCATCGTCGCCCAGAAAGGCAACGTGCAGGCTCAAGGCCTCATTGCCGGAGCGTTTGGTGTGGAATCTCTGCTTC CTTTGCTGCAAAAAGGGGAGAAGGGTATCGACGAGTTCGTCAATCGCGCGCGGTCGATGGGCCTTGTGTTCGATGACAAG CAACTCGCGCGCGGTCAGCAGTTCAACGAGAACATGCTCAAGCTCGAAGCGTCGGCCACGCGGTTGAAGTACTCGTTCGG TGATGCGCTTGCGCCCGCGGTGCAGCGCGTACTCGACGTTGTTGGACGCCTCGTCGATAAATATGGCGACGTGGTCGCCT CGAAGGTGTCCGAGTACGTCGAGAAGTTCGCGAACTGGATCGATCACGTCGACTGGGACAAGACCACGAGCGAGATCGGA AAATTCGTCGATGCCATTGGCGGCGTGAAGGGGATTGCTATCGCGATCGCCGCGATTTCGTTCGCGGGCCCGATCGCAAG TGTGCTCAGCCTGATCTCGAATCTGACGCTGCTCGCAACTACGACGGTGCCGACGGCCGTGGCGGCGCTTGCGCGGCTCG CAGGCGGCCCGATCATGGCAGCTGTTCTCGCTCTGCTGCATTCAAAGGACCTGAATACCGGTGAAGACGACTATCTGAAG CAGCATCAGGCGCAGCCAGGCCAGCAATGGCAGGGTGACCCAATCGGCGATCGTCGGCGCGCGGGTGCCGCAGACGATGC TCAAACCGCAGGCGTCGTCGATCGGTTGACGAAGATGGGCTGGTCGAAGGAGCAGGCCGCTGGTCTGGCGGCCAACTTCT GGCAAGAGAGCCTGTTCAATCCTAATGCTGTAGGTGACAACGGCCACGCATATGGCATCGGACAGTGGCATGAAGATCGG CAGGCTGAATTCAAGAAGCTGTTCGGCACCGACATCCGTAAGTCGACGCTGGACCAGCAGCTTCAATTCGCGGATTACGA GCTGCGCCGCGGCAACGAACAGAAGGCAGGGCGCGCGCTGATGGGCGCGTCTTCGGCGCAGGACGCCGGCAGCATCGTGT CGCGTCTGTACGAGCGCCCGGCCGATGCGGCAGGCGAAGCGGCGCGGCGCGGCCAGATGGCGGCGGCGATAGACGGCAAG GTTCACGTGCACGTCGACATTCCGAACGCTCCGCCGGGCACGAAAGCATCAGTGCGCGCTAGCGGCGGCGCAACCGCGTC GGCACGCGTCGGCACATCGAACGTTATTGGACCATCGGTATGA
Upstream 100 bases:
>100_bases TCTTCCGCTGGGGGCCGCACGAGGCATGGACGTTGCCTTTGTCGCGTCTCGTCTGGTGGCTGGGGCAAGCTGAACGCATC AAAAAGCAAATGGAGTCGTG
Downstream 100 bases:
>100_bases GCACCGCATCCACGATTGGCAACGCTGTCGGAAGTATCGGCGGCGTCGCATCCGCAGCGGGCGCGGCGGCCAGTGATCTC GCCAAGCTGTTCAATGGTGG
Product: hypothetical protein
Products: NA
Alternate protein names: Phage Related Tail Protein; Hypothethical Protein; Lambda Family Phage Tail Tape Measure Protein
Number of amino acids: Translated: 600; Mature: 599
Protein sequence:
>600_residues MAASTPFVVTITAVDKATASVQKIKASLASVTKPASDLKASFASFSKEAGLDRVAKSMKSVGTAAADTARQVASVITPLT TIAGIGSIAGIALLANEWGKFGAEVQRTSGVLGVSTQDLQAFRGAAKLAGLSADDMTGSLKSLGRTIEDATYGRNQDALV MMQKFGITLHRTKDGAVDATRALKEVANAIVAQKGNVQAQGLIAGAFGVESLLPLLQKGEKGIDEFVNRARSMGLVFDDK QLARGQQFNENMLKLEASATRLKYSFGDALAPAVQRVLDVVGRLVDKYGDVVASKVSEYVEKFANWIDHVDWDKTTSEIG KFVDAIGGVKGIAIAIAAISFAGPIASVLSLISNLTLLATTTVPTAVAALARLAGGPIMAAVLALLHSKDLNTGEDDYLK QHQAQPGQQWQGDPIGDRRRAGAADDAQTAGVVDRLTKMGWSKEQAAGLAANFWQESLFNPNAVGDNGHAYGIGQWHEDR QAEFKKLFGTDIRKSTLDQQLQFADYELRRGNEQKAGRALMGASSAQDAGSIVSRLYERPADAAGEAARRGQMAAAIDGK VHVHVDIPNAPPGTKASVRASGGATASARVGTSNVIGPSV
Sequences:
>Translated_600_residues MAASTPFVVTITAVDKATASVQKIKASLASVTKPASDLKASFASFSKEAGLDRVAKSMKSVGTAAADTARQVASVITPLT TIAGIGSIAGIALLANEWGKFGAEVQRTSGVLGVSTQDLQAFRGAAKLAGLSADDMTGSLKSLGRTIEDATYGRNQDALV MMQKFGITLHRTKDGAVDATRALKEVANAIVAQKGNVQAQGLIAGAFGVESLLPLLQKGEKGIDEFVNRARSMGLVFDDK QLARGQQFNENMLKLEASATRLKYSFGDALAPAVQRVLDVVGRLVDKYGDVVASKVSEYVEKFANWIDHVDWDKTTSEIG KFVDAIGGVKGIAIAIAAISFAGPIASVLSLISNLTLLATTTVPTAVAALARLAGGPIMAAVLALLHSKDLNTGEDDYLK QHQAQPGQQWQGDPIGDRRRAGAADDAQTAGVVDRLTKMGWSKEQAAGLAANFWQESLFNPNAVGDNGHAYGIGQWHEDR QAEFKKLFGTDIRKSTLDQQLQFADYELRRGNEQKAGRALMGASSAQDAGSIVSRLYERPADAAGEAARRGQMAAAIDGK VHVHVDIPNAPPGTKASVRASGGATASARVGTSNVIGPSV >Mature_599_residues AASTPFVVTITAVDKATASVQKIKASLASVTKPASDLKASFASFSKEAGLDRVAKSMKSVGTAAADTARQVASVITPLTT IAGIGSIAGIALLANEWGKFGAEVQRTSGVLGVSTQDLQAFRGAAKLAGLSADDMTGSLKSLGRTIEDATYGRNQDALVM MQKFGITLHRTKDGAVDATRALKEVANAIVAQKGNVQAQGLIAGAFGVESLLPLLQKGEKGIDEFVNRARSMGLVFDDKQ LARGQQFNENMLKLEASATRLKYSFGDALAPAVQRVLDVVGRLVDKYGDVVASKVSEYVEKFANWIDHVDWDKTTSEIGK FVDAIGGVKGIAIAIAAISFAGPIASVLSLISNLTLLATTTVPTAVAALARLAGGPIMAAVLALLHSKDLNTGEDDYLKQ HQAQPGQQWQGDPIGDRRRAGAADDAQTAGVVDRLTKMGWSKEQAAGLAANFWQESLFNPNAVGDNGHAYGIGQWHEDRQ AEFKKLFGTDIRKSTLDQQLQFADYELRRGNEQKAGRALMGASSAQDAGSIVSRLYERPADAAGEAARRGQMAAAIDGKV HVHVDIPNAPPGTKASVRASGGATASARVGTSNVIGPSV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 62870; Mature: 62739
Theoretical pI: Translated: 9.60; Mature: 9.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAASTPFVVTITAVDKATASVQKIKASLASVTKPASDLKASFASFSKEAGLDRVAKSMKS CCCCCCEEEEEEECHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHH VGTAAADTARQVASVITPLTTIAGIGSIAGIALLANEWGKFGAEVQRTSGVLGVSTQDLQ HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCEECCCHHHHH AFRGAAKLAGLSADDMTGSLKSLGRTIEDATYGRNQDALVMMQKFGITLHRTKDGAVDAT HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCEEEECCCCCHHHH RALKEVANAIVAQKGNVQAQGLIAGAFGVESLLPLLQKGEKGIDEFVNRARSMGLVFDDK HHHHHHHHHHHHCCCCCCCCEEEEHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCEECCH QLARGQQFNENMLKLEASATRLKYSFGDALAPAVQRVLDVVGRLVDKYGDVVASKVSEYV HHHCCCHHCCHHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EKFANWIDHVDWDKTTSEIGKFVDAIGGVKGIAIAIAAISFAGPIASVLSLISNLTLLAT HHHHHHHHCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEH TTVPTAVAALARLAGGPIMAAVLALLHSKDLNTGEDDYLKQHQAQPGQQWQGDPIGDRRR HHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCHHC AGAADDAQTAGVVDRLTKMGWSKEQAAGLAANFWQESLFNPNAVGDNGHAYGIGQWHEDR CCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCEECCCCCCHHH QAEFKKLFGTDIRKSTLDQQLQFADYELRRGNEQKAGRALMGASSAQDAGSIVSRLYERP HHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCHHHHHHHHHHHCC ADAAGEAARRGQMAAAIDGKVHVHVDIPNAPPGTKASVRASGGATASARVGTSNVIGPSV CCHHHHHHHCCCEEEEECCEEEEEEECCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure AASTPFVVTITAVDKATASVQKIKASLASVTKPASDLKASFASFSKEAGLDRVAKSMKS CCCCCEEEEEEECHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHH VGTAAADTARQVASVITPLTTIAGIGSIAGIALLANEWGKFGAEVQRTSGVLGVSTQDLQ HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCEECCCHHHHH AFRGAAKLAGLSADDMTGSLKSLGRTIEDATYGRNQDALVMMQKFGITLHRTKDGAVDAT HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCEEEECCCCCHHHH RALKEVANAIVAQKGNVQAQGLIAGAFGVESLLPLLQKGEKGIDEFVNRARSMGLVFDDK HHHHHHHHHHHHCCCCCCCCEEEEHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCEECCH QLARGQQFNENMLKLEASATRLKYSFGDALAPAVQRVLDVVGRLVDKYGDVVASKVSEYV HHHCCCHHCCHHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EKFANWIDHVDWDKTTSEIGKFVDAIGGVKGIAIAIAAISFAGPIASVLSLISNLTLLAT HHHHHHHHCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEH TTVPTAVAALARLAGGPIMAAVLALLHSKDLNTGEDDYLKQHQAQPGQQWQGDPIGDRRR HHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCHHC AGAADDAQTAGVVDRLTKMGWSKEQAAGLAANFWQESLFNPNAVGDNGHAYGIGQWHEDR CCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCEECCCCCCHHH QAEFKKLFGTDIRKSTLDQQLQFADYELRRGNEQKAGRALMGASSAQDAGSIVSRLYERP HHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCHHHHHHHHHHHCC ADAAGEAARRGQMAAAIDGKVHVHVDIPNAPPGTKASVRASGGATASARVGTSNVIGPSV CCHHHHHHHCCCEEEEECCEEEEEEECCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA