| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is 186476623
Identifier: 186476623
GI number: 186476623
Start: 2127881
End: 2128753
Strand: Reverse
Name: 186476623
Synonym: Bphy_1868
Alternate gene names: NA
Gene position: 2128753-2127881 (Counterclockwise)
Preceding gene: 186476624
Following gene: 186476619
Centisome position: 61.19
GC content: 60.37
Gene sequence:
>873_bases ATGGACCGTCTGATTGCTTCCAACACCGTTGCAGTGGGCAGTGGTGATACTGCGCCCGCGACCGGGACGCCCGGGCAAGC CACGTCGGGAAATCCTGCCACGAACACTCCAGCAACGGTTTTTCCAGCGTATGCATGGAATGCCATTCAGGAAGAGATGA TTGCCATCCTGGCTGCCGCAGGTATCACGCCTGATCGAAACAACAATGCCCAGATCGTCGCCGCGATCAAGGCGTTGTGC GGTCCAGGTCGCCTTCTCAATGGCGGCCCGACTGTGTACACAGCGGGAGCTACGTGGAATCGTAATCCCGCAACAACTTT CCTGATTGTTGAAATACAAGCACCAGGCGGTGGCAGTGCGGGTGCTCCGGCTACGGGTGCCAGCCAGTATGCTGGTTCGC CGGGGGCGTCTTCGGGTTCATACGCAAAAGTACTGCTAACTGCTGCACAGGCTGGTGCATCGCAGACCATCACTGCAGGT GCGCCAGGTGCAGCAGGCCCTACCGGCAGTGGAGCGGGCGGCACCGGTGGTACGGCCTCGTTTGGCTCTATCATCACTTG CCCGGGCGGCCTTGGTAGTAGCAGCTATGGCCCTACTGGCACTACCACGTCGATTCAGAACGCGCCTAGCGCGGCGGGAC TCCCAACTATCACTGCCGGTATCGTTCTTACCTCGACCCCGGGAAATACTGGTGGTTACGCAATCGGCACGTTGACGGGC GTAGCATCTGCGCAGGGTGGTGCGGCGCCCATCAACGGTTCTACGACGTCAGAAGGCTCGGGCGGCCGTGGCACTGGCAT TGGCGCAAGCACAAGCGCAGTGGCTGGTGCTGTAGGCGGCGGCCCCAAAATTATCGTTTGGGAGTTTGCATAA
Upstream 100 bases:
>100_bases GCCGTTCGCAGCGTGGAATAACAACGTCCTGCAATGCGAGTTGCAGAAATACGCGCCGGCGCATACCCAACTCATTTTCA AATATTCCTAAGGACTATCG
Downstream 100 bases:
>100_bases ATGAATAACTGCGCAATCGTGCGGGACGGCATGGTCATCAACGTTGTGGTGTGGGATGGGAATACGGAACAGTGGCAACC ACCAGAGGGCACGACCGCCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 290; Mature: 290
Protein sequence:
>290_residues MDRLIASNTVAVGSGDTAPATGTPGQATSGNPATNTPATVFPAYAWNAIQEEMIAILAAAGITPDRNNNAQIVAAIKALC GPGRLLNGGPTVYTAGATWNRNPATTFLIVEIQAPGGGSAGAPATGASQYAGSPGASSGSYAKVLLTAAQAGASQTITAG APGAAGPTGSGAGGTGGTASFGSIITCPGGLGSSSYGPTGTTTSIQNAPSAAGLPTITAGIVLTSTPGNTGGYAIGTLTG VASAQGGAAPINGSTTSEGSGGRGTGIGASTSAVAGAVGGGPKIIVWEFA
Sequences:
>Translated_290_residues MDRLIASNTVAVGSGDTAPATGTPGQATSGNPATNTPATVFPAYAWNAIQEEMIAILAAAGITPDRNNNAQIVAAIKALC GPGRLLNGGPTVYTAGATWNRNPATTFLIVEIQAPGGGSAGAPATGASQYAGSPGASSGSYAKVLLTAAQAGASQTITAG APGAAGPTGSGAGGTGGTASFGSIITCPGGLGSSSYGPTGTTTSIQNAPSAAGLPTITAGIVLTSTPGNTGGYAIGTLTG VASAQGGAAPINGSTTSEGSGGRGTGIGASTSAVAGAVGGGPKIIVWEFA >Mature_290_residues MDRLIASNTVAVGSGDTAPATGTPGQATSGNPATNTPATVFPAYAWNAIQEEMIAILAAAGITPDRNNNAQIVAAIKALC GPGRLLNGGPTVYTAGATWNRNPATTFLIVEIQAPGGGSAGAPATGASQYAGSPGASSGSYAKVLLTAAQAGASQTITAG APGAAGPTGSGAGGTGGTASFGSIITCPGGLGSSSYGPTGTTTSIQNAPSAAGLPTITAGIVLTSTPGNTGGYAIGTLTG VASAQGGAAPINGSTTSEGSGGRGTGIGASTSAVAGAVGGGPKIIVWEFA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27079; Mature: 27079
Theoretical pI: Translated: 6.48; Mature: 6.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDRLIASNTVAVGSGDTAPATGTPGQATSGNPATNTPATVFPAYAWNAIQEEMIAILAAA CCCEECCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEECHHHHHHHHHHHHHHHHHH GITPDRNNNAQIVAAIKALCGPGRLLNGGPTVYTAGATWNRNPATTFLIVEIQAPGGGSA CCCCCCCCCCEEEEEHHHHCCCCEEECCCCEEEECCCCCCCCCCEEEEEEEEECCCCCCC GAPATGASQYAGSPGASSGSYAKVLLTAAQAGASQTITAGAPGAAGPTGSGAGGTGGTAS CCCCCCCHHHCCCCCCCCCCEEEEEEEHHHCCCCCEEECCCCCCCCCCCCCCCCCCCCCC FGSIITCPGGLGSSSYGPTGTTTSIQNAPSAAGLPTITAGIVLTSTPGNTGGYAIGTLTG CCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCEEEEEEEE VASAQGGAAPINGSTTSEGSGGRGTGIGASTSAVAGAVGGGPKIIVWEFA HHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCEEEEEECC >Mature Secondary Structure MDRLIASNTVAVGSGDTAPATGTPGQATSGNPATNTPATVFPAYAWNAIQEEMIAILAAA CCCEECCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEECHHHHHHHHHHHHHHHHHH GITPDRNNNAQIVAAIKALCGPGRLLNGGPTVYTAGATWNRNPATTFLIVEIQAPGGGSA CCCCCCCCCCEEEEEHHHHCCCCEEECCCCEEEECCCCCCCCCCEEEEEEEEECCCCCCC GAPATGASQYAGSPGASSGSYAKVLLTAAQAGASQTITAGAPGAAGPTGSGAGGTGGTAS CCCCCCCHHHCCCCCCCCCCEEEEEEEHHHCCCCCEEECCCCCCCCCCCCCCCCCCCCCC FGSIITCPGGLGSSSYGPTGTTTSIQNAPSAAGLPTITAGIVLTSTPGNTGGYAIGTLTG CCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCEEEEEEEE VASAQGGAAPINGSTTSEGSGGRGTGIGASTSAVAGAVGGGPKIIVWEFA HHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA