| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is 186476608
Identifier: 186476608
GI number: 186476608
Start: 2117767
End: 2118543
Strand: Direct
Name: 186476608
Synonym: Bphy_1853
Alternate gene names: NA
Gene position: 2117767-2118543 (Clockwise)
Preceding gene: 186476606
Following gene: 186476610
Centisome position: 60.87
GC content: 64.09
Gene sequence:
>777_bases ATGACTTTCCACCTCGGGCGCATTCCGGGCCGCCGCGCCGCTGGCCAGCATCCGCTGCGCAAGCTGTTCGCCGGGCTGCT CGGCATCGTTGCAACGCAAGGCGCGGCGCTCGCCGCGCCGCATCTGTTGGGACATACGATGGCAGGCTTGCACAAGACGA TCGTCATCGATGCGCAAGGCGACTCGACGATGTGGGGCTATCAGACGTCGGGCGGCTTCACGAAGTCGTGGCAATCGCCC GACAATCCGCCAGCATTGCTTCAGGCCGCGTTGCAGGCGCGCTTTGGCGCGCGTGTGATTGTGCAGAACAACGGCGTGCC GGGCGCGACGCTCGTCGATCGCGAGCAAGGCGTCAACGGTTATGGGCAACCGTACTCGCGATGGGTGACGATATCGCCCG CGCATATCGTGATCGTCAACTTCGCGCTCAACGACGCCGACAATCACGTGAAGGAGCCGCCCGCCGCGTTTCGCGCGCGG CTCACGCGCTTCATCAAGGAATCGCGCAACGCTGGACGCATCGTCGTGCTCGAAGAACCCAATCCCGTCGATTACGCGTT GAACGAGACGGTCGTGCCGCAATACGTGGCTGTCGTCGATGAACTGGCGAAACGCTACGGGCTTGCGCTGGTGCGGCAGT ATGCGCCGATCGGCGCGATGCGCGACTGGCGCTCGCTGCTGATCGATCGCGTGCACCCCACGGATGCGCTTTACCGTCTC AAGGCGGAGCGGCAACGCGAAGTGATCGAACCGATCGTAGCGAGGCTGATGGAGTGA
Upstream 100 bases:
>100_bases CAAGTTCGTGTTGCGTTTTATGACGTGGTATTTGTCGTGCCAGATGGCGCCGCGGATGGTGCGCGGCGTGTTCCGTCAAT TGAACCGACACGGGGCATCC
Downstream 100 bases:
>100_bases ATGCGGCGCACGACGCCGCATGCTCATTCGCCCACGGAAAGCACCTGCTGCGAAGCGACCAGCTTCGGATGAGGCTTGCA TCCGCAGATGCACAGATCAT
Product: GDSL family lipase
Products: NA
Alternate protein names: GDSL Family Lipase; Conserved Protein
Number of amino acids: Translated: 258; Mature: 257
Protein sequence:
>258_residues MTFHLGRIPGRRAAGQHPLRKLFAGLLGIVATQGAALAAPHLLGHTMAGLHKTIVIDAQGDSTMWGYQTSGGFTKSWQSP DNPPALLQAALQARFGARVIVQNNGVPGATLVDREQGVNGYGQPYSRWVTISPAHIVIVNFALNDADNHVKEPPAAFRAR LTRFIKESRNAGRIVVLEEPNPVDYALNETVVPQYVAVVDELAKRYGLALVRQYAPIGAMRDWRSLLIDRVHPTDALYRL KAERQREVIEPIVARLME
Sequences:
>Translated_258_residues MTFHLGRIPGRRAAGQHPLRKLFAGLLGIVATQGAALAAPHLLGHTMAGLHKTIVIDAQGDSTMWGYQTSGGFTKSWQSP DNPPALLQAALQARFGARVIVQNNGVPGATLVDREQGVNGYGQPYSRWVTISPAHIVIVNFALNDADNHVKEPPAAFRAR LTRFIKESRNAGRIVVLEEPNPVDYALNETVVPQYVAVVDELAKRYGLALVRQYAPIGAMRDWRSLLIDRVHPTDALYRL KAERQREVIEPIVARLME >Mature_257_residues TFHLGRIPGRRAAGQHPLRKLFAGLLGIVATQGAALAAPHLLGHTMAGLHKTIVIDAQGDSTMWGYQTSGGFTKSWQSPD NPPALLQAALQARFGARVIVQNNGVPGATLVDREQGVNGYGQPYSRWVTISPAHIVIVNFALNDADNHVKEPPAAFRARL TRFIKESRNAGRIVVLEEPNPVDYALNETVVPQYVAVVDELAKRYGLALVRQYAPIGAMRDWRSLLIDRVHPTDALYRLK AERQREVIEPIVARLME
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28405; Mature: 28274
Theoretical pI: Translated: 10.21; Mature: 10.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTFHLGRIPGRRAAGQHPLRKLFAGLLGIVATQGAALAAPHLLGHTMAGLHKTIVIDAQG CCEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCEEEEEEECCC DSTMWGYQTSGGFTKSWQSPDNPPALLQAALQARFGARVIVQNNGVPGATLVDREQGVNG CCCCCCEECCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEECCCCCCCEEEEHHCCCCC YGQPYSRWVTISPAHIVIVNFALNDADNHVKEPPAAFRARLTRFIKESRNAGRIVVLEEP CCCCCCCEEEECCCEEEEEEEEECCCHHHCCCCHHHHHHHHHHHHHHCCCCCEEEEEECC NPVDYALNETVVPQYVAVVDELAKRYGLALVRQYAPIGAMRDWRSLLIDRVHPTDALYRL CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHH KAERQREVIEPIVARLME HHHHHHHHHHHHHHHHCC >Mature Secondary Structure TFHLGRIPGRRAAGQHPLRKLFAGLLGIVATQGAALAAPHLLGHTMAGLHKTIVIDAQG CEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCEEEEEEECCC DSTMWGYQTSGGFTKSWQSPDNPPALLQAALQARFGARVIVQNNGVPGATLVDREQGVNG CCCCCCEECCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEECCCCCCCEEEEHHCCCCC YGQPYSRWVTISPAHIVIVNFALNDADNHVKEPPAAFRARLTRFIKESRNAGRIVVLEEP CCCCCCCEEEECCCEEEEEEEEECCCHHHCCCCHHHHHHHHHHHHHHCCCCCEEEEEECC NPVDYALNETVVPQYVAVVDELAKRYGLALVRQYAPIGAMRDWRSLLIDRVHPTDALYRL CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHH KAERQREVIEPIVARLME HHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA