| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is aceE [H]
Identifier: 186476603
GI number: 186476603
Start: 2111627
End: 2114362
Strand: Reverse
Name: aceE [H]
Synonym: Bphy_1848
Alternate gene names: 186476603
Gene position: 2114362-2111627 (Counterclockwise)
Preceding gene: 186476605
Following gene: 186476600
Centisome position: 60.77
GC content: 65.5
Gene sequence:
>2736_bases ATGACGGATTTATCGAGCGGTGCCCGCCCCGTTGTTGCCTTGACCCAGGCTCGCATCGACAGCGATCCGCAGGAGACGGC CGAATGGCTCGCCGCGCTGGATGGCGTCGTGCAACATGTCGGCCTCGAGCGCGCGCAGTACCTGTTCGACCGGCTGGCGG CGCACGCGCTCGGCAATGGGGTCGCGACGGCGCGCGCGAACGTCACGCCCTACGCAAACACGATATCCGTCGATCAGCAG CCGCCTTATCCCGGCGACCTCGACACGGAAGAAAAGCTCGCCGCCGCGTTGCGCTGGAACGCGCTCGCGATGGTGGTGCG CGCCAATCGCGCGTACGGCGAATTGGGCGGCCACATTGCGAGCTATGCTTCGGCGGCTGATCTGTTCGAAGTCGGCTTCA ATCACTTCTTCCGCGCCGCGAGCACTAGGCAAGACGGCAACGATGCGCGCGGCGGCGATCTCGTCTACTTCCAGCCGCAT TCGTCGCCGGGCGTGTACGCGCGCGCGTTCCTCGAAGGCTTTCTGGACGAGACGCATCTGGAACACTATCGCCGCGAAAT CGCCGGGCCGGGCTTGTGTTCGTATCCGCATCCGTGGCTGATGCCCGACTTCTGGCAGTTCCCGACGGGCTCGATGGGCA TCGGTCCCATCAACGCGATCTACCAGGCGCGCTTCATGCGCTATCTGCAGAACCGCGGCCTCCTGAAGACGGAGGGCCGC AAGGTGTGGGGCTTCTTCGGCGACGGCGAGATGGACGAGCCGGAGTCGATCGGTGCGCTGTCGCTCGCGGCGCGCGAAGG GCTCGACAACCTCGTGTTCGTGATCAATTGCAATTTGCAGCGGCTCGACGGCCCCGTGCGCAGCAACGGCCGCATCATCG ACGAACTCGAAGCGCAGTTCACGGGCGCCGGCTGGAACGTGATCAAGGTGCTGTGGGGCTCGGACTGGGATGCGCTGTTC GCACGCGACCGCACGGGCGCCTTGCTGCGCGCGTTTGCCCATACCGTCGACGGCCAGTTCCAGACCTTCTCGGCCAACGA CGGCGCGTATAACCGCGAGCGCTTCTTCGGCCAGAATCCCGAGCTCGAGGCGCTCGCCGCGCATCTGAGCAACGACGATA TCGACCGCTTGCGGCGCGGCGGCCACGACGTGCGCAAGCTGCACGCCGCGTATGACCGTGCGTTGAAGCATCGCGGCCAG CCCACGGTGATACTCGCGAAGACGATGAAGGGCTTCGGCATGGGCTCCATCGGCCAGGGGCGCATGACGACGCATCAGCA GAAGAAGCTCGACGTCGAGCAGCTGAAGGCGTTCCGCGACCGCTTCCGCCTGCCGTTGTCGGACGAGGACGTCGAGCAAC TCAGGTTTTACAAGCCAGCAGAAAACAGCCCGGAAATGCAGTACCTGCATGCACGCCGGGTTGCCCTCGGAGGCTATCTG CCCAGAAGGCGGGCGGCGGCATCGCGGACACCGACCGTGCCCGCGCTGCCATCCTGGGGGCAATTCGCGCTGGAGGCGAA CGGCAAGGAGATGTCGACCACGATGGCCGTCGTGCGCATGCTCGGCAGTCTGCTGAAGGACGCGTCGCTGGGCCCGCGTG TCGTGCCTGTCGTCGCCGATGAAGCGCGGACCTTCGGCATGGCGAACCTGTTCCGCCAGGTGGGCATCTATTCGCCGCTC GGCCAGTTGTATGAGCCGGAAGACATGGGCTCGATGCTGTACTACCGCGAAGACACGGGCGGCCAGATACTCGAAGAGGG TATTTCCGAAGCAGGGGCCGTGTCGTCGTGGATCGCCGCGGCCACGTCGTATAGCGTGCACGATCTCGCCATGCTGCCGT TCTACATCTACTACTCGATGTTCGGCTTCCAGCGCATCGGCGACCTGATCTGGGCGGCAGCGGACCAGCGCGCGCGAGGC TTCCTGATCGGCGCGACGGCGGGCAAGACGACGCTCGGCGGCGAAGGGCTTCAGCATCAGGACGGCACGAGTCATCTCGC GGCATCGACGGTGCCGAACTGCCGTTCATACGATCCCGCGTTTGCCTTCGAAGTCGCGCTGATCGTCGATGAAGGCATGC GGGAGATGCTCGAACGTCAGCGCGATGTGTTCTATTACCTGACCGTCACGAACGAGAACTACGCACAGCCTTCGCTGCCT GCAGCTGTGTCTGTCGATACCGTGCGGGAAGGCGTGCTGAAGGGGATGTATCCGCTCGATCAGGCATCGCTGGAAACGGC GCAGGTGCAATTGCTCGGCGCGGGCGCGATTCTCGGCGAAGTGCAGGCAGCCGCGCGCATGCTGAGGGACGACTGGAACA TCCCGGCTGCCGTATGGAGCGTGACGAGCTTCACCGAACTGCATCGTAACGGCGTTGCAGCGGAACGTGCGGAGCGCCTC TTCGACGACGCGCAACACGCGTTGCCGTATGTGACGTCCGCGCTCGCTGCAGTGCGCGGCCCGGTGATCGCCGCGACCGA CTATGTGCGCGCCGTGCCCGAACTGATCCGCGCGTATGTGCCGCGCCGCTACGTGACGCTCGGCACCGACGGCTTCGGGC GCAGCGACACGCGCGCTGCGCTGCGCGCGTTCTTCGAAGTGGATCGCGCGTCGATCGCGATTGCCGCGTTGAAGGCGCTC GCCGACGAGGGGGCGAGCGAACGCGACATCGTCAGGCAGGCGATCGACCGTTATGGCAAACGCGATGGGGACAACGGCGC GCCCTGGGAGAGGTGA
Upstream 100 bases:
>100_bases CTGCGCAAGCAAAAGAGACGCACATTTTCCGGACGCATGGGTAAGCTGATGAGACCTTTTCGAGTCGCCTTTCACCCACG CTTTCTGCCGGAGTTGCGCC
Downstream 100 bases:
>100_bases TGCGCGTCACATTTGCGGAGTTTGCGGAGTTTGCGCATGTTGCGCAGGTTGCGGCACGAGCAGATTGGCATCGCGCGCGA GCAGCCAGCGGCCGTCGGCC
Product: 2-oxoacid dehydrogenase subunit E1
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 911; Mature: 910
Protein sequence:
>911_residues MTDLSSGARPVVALTQARIDSDPQETAEWLAALDGVVQHVGLERAQYLFDRLAAHALGNGVATARANVTPYANTISVDQQ PPYPGDLDTEEKLAAALRWNALAMVVRANRAYGELGGHIASYASAADLFEVGFNHFFRAASTRQDGNDARGGDLVYFQPH SSPGVYARAFLEGFLDETHLEHYRREIAGPGLCSYPHPWLMPDFWQFPTGSMGIGPINAIYQARFMRYLQNRGLLKTEGR KVWGFFGDGEMDEPESIGALSLAAREGLDNLVFVINCNLQRLDGPVRSNGRIIDELEAQFTGAGWNVIKVLWGSDWDALF ARDRTGALLRAFAHTVDGQFQTFSANDGAYNRERFFGQNPELEALAAHLSNDDIDRLRRGGHDVRKLHAAYDRALKHRGQ PTVILAKTMKGFGMGSIGQGRMTTHQQKKLDVEQLKAFRDRFRLPLSDEDVEQLRFYKPAENSPEMQYLHARRVALGGYL PRRRAAASRTPTVPALPSWGQFALEANGKEMSTTMAVVRMLGSLLKDASLGPRVVPVVADEARTFGMANLFRQVGIYSPL GQLYEPEDMGSMLYYREDTGGQILEEGISEAGAVSSWIAAATSYSVHDLAMLPFYIYYSMFGFQRIGDLIWAAADQRARG FLIGATAGKTTLGGEGLQHQDGTSHLAASTVPNCRSYDPAFAFEVALIVDEGMREMLERQRDVFYYLTVTNENYAQPSLP AAVSVDTVREGVLKGMYPLDQASLETAQVQLLGAGAILGEVQAAARMLRDDWNIPAAVWSVTSFTELHRNGVAAERAERL FDDAQHALPYVTSALAAVRGPVIAATDYVRAVPELIRAYVPRRYVTLGTDGFGRSDTRAALRAFFEVDRASIAIAALKAL ADEGASERDIVRQAIDRYGKRDGDNGAPWER
Sequences:
>Translated_911_residues MTDLSSGARPVVALTQARIDSDPQETAEWLAALDGVVQHVGLERAQYLFDRLAAHALGNGVATARANVTPYANTISVDQQ PPYPGDLDTEEKLAAALRWNALAMVVRANRAYGELGGHIASYASAADLFEVGFNHFFRAASTRQDGNDARGGDLVYFQPH SSPGVYARAFLEGFLDETHLEHYRREIAGPGLCSYPHPWLMPDFWQFPTGSMGIGPINAIYQARFMRYLQNRGLLKTEGR KVWGFFGDGEMDEPESIGALSLAAREGLDNLVFVINCNLQRLDGPVRSNGRIIDELEAQFTGAGWNVIKVLWGSDWDALF ARDRTGALLRAFAHTVDGQFQTFSANDGAYNRERFFGQNPELEALAAHLSNDDIDRLRRGGHDVRKLHAAYDRALKHRGQ PTVILAKTMKGFGMGSIGQGRMTTHQQKKLDVEQLKAFRDRFRLPLSDEDVEQLRFYKPAENSPEMQYLHARRVALGGYL PRRRAAASRTPTVPALPSWGQFALEANGKEMSTTMAVVRMLGSLLKDASLGPRVVPVVADEARTFGMANLFRQVGIYSPL GQLYEPEDMGSMLYYREDTGGQILEEGISEAGAVSSWIAAATSYSVHDLAMLPFYIYYSMFGFQRIGDLIWAAADQRARG FLIGATAGKTTLGGEGLQHQDGTSHLAASTVPNCRSYDPAFAFEVALIVDEGMREMLERQRDVFYYLTVTNENYAQPSLP AAVSVDTVREGVLKGMYPLDQASLETAQVQLLGAGAILGEVQAAARMLRDDWNIPAAVWSVTSFTELHRNGVAAERAERL FDDAQHALPYVTSALAAVRGPVIAATDYVRAVPELIRAYVPRRYVTLGTDGFGRSDTRAALRAFFEVDRASIAIAALKAL ADEGASERDIVRQAIDRYGKRDGDNGAPWER >Mature_910_residues TDLSSGARPVVALTQARIDSDPQETAEWLAALDGVVQHVGLERAQYLFDRLAAHALGNGVATARANVTPYANTISVDQQP PYPGDLDTEEKLAAALRWNALAMVVRANRAYGELGGHIASYASAADLFEVGFNHFFRAASTRQDGNDARGGDLVYFQPHS SPGVYARAFLEGFLDETHLEHYRREIAGPGLCSYPHPWLMPDFWQFPTGSMGIGPINAIYQARFMRYLQNRGLLKTEGRK VWGFFGDGEMDEPESIGALSLAAREGLDNLVFVINCNLQRLDGPVRSNGRIIDELEAQFTGAGWNVIKVLWGSDWDALFA RDRTGALLRAFAHTVDGQFQTFSANDGAYNRERFFGQNPELEALAAHLSNDDIDRLRRGGHDVRKLHAAYDRALKHRGQP TVILAKTMKGFGMGSIGQGRMTTHQQKKLDVEQLKAFRDRFRLPLSDEDVEQLRFYKPAENSPEMQYLHARRVALGGYLP RRRAAASRTPTVPALPSWGQFALEANGKEMSTTMAVVRMLGSLLKDASLGPRVVPVVADEARTFGMANLFRQVGIYSPLG QLYEPEDMGSMLYYREDTGGQILEEGISEAGAVSSWIAAATSYSVHDLAMLPFYIYYSMFGFQRIGDLIWAAADQRARGF LIGATAGKTTLGGEGLQHQDGTSHLAASTVPNCRSYDPAFAFEVALIVDEGMREMLERQRDVFYYLTVTNENYAQPSLPA AVSVDTVREGVLKGMYPLDQASLETAQVQLLGAGAILGEVQAAARMLRDDWNIPAAVWSVTSFTELHRNGVAAERAERLF DDAQHALPYVTSALAAVRGPVIAATDYVRAVPELIRAYVPRRYVTLGTDGFGRSDTRAALRAFFEVDRASIAIAALKALA DEGASERDIVRQAIDRYGKRDGDNGAPWER
Specific function: The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). It contains multiple copies of three enzymatic components:pyruvate dehydrogenase (E1), dihydrolipoamide acetyltransferase (E2) and lipoamide dehydroge
COG id: COG2609
COG function: function code C; Pyruvate dehydrogenase complex, dehydrogenase (E1) component
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1786304, Length=882, Percent_Identity=53.0612244897959, Blast_Score=956, Evalue=0.0,
Paralogues:
None
Copy number: 1140 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). 400 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 6,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004660 - InterPro: IPR009014 - InterPro: IPR015941 - InterPro: IPR005474 [H]
Pfam domain/function: PF00456 Transketolase_N [H]
EC number: =1.2.4.1 [H]
Molecular weight: Translated: 100329; Mature: 100198
Theoretical pI: Translated: 5.94; Mature: 5.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDLSSGARPVVALTQARIDSDPQETAEWLAALDGVVQHVGLERAQYLFDRLAAHALGNG CCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC VATARANVTPYANTISVDQQPPYPGDLDTEEKLAAALRWNALAMVVRANRAYGELGGHIA CEEEECCCCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH SYASAADLFEVGFNHFFRAASTRQDGNDARGGDLVYFQPHSSPGVYARAFLEGFLDETHL HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHH EHYRREIAGPGLCSYPHPWLMPDFWQFPTGSMGIGPINAIYQARFMRYLQNRGLLKTEGR HHHHHHHCCCCCCCCCCCCCCCCHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEECCC KVWGFFGDGEMDEPESIGALSLAAREGLDNLVFVINCNLQRLDGPVRSNGRIIDELEAQF EEEEEECCCCCCCCHHCCHHHHHHHCCCCCEEEEEECCHHHCCCCCCCCCCCHHHHHHHH TGAGWNVIKVLWGSDWDALFARDRTGALLRAFAHTVDGQFQTFSANDGAYNRERFFGQNP CCCCCEEEEEEECCCHHHHHHCCCHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHCCCCC ELEALAAHLSNDDIDRLRRGGHDVRKLHAAYDRALKHRGQPTVILAKTMKGFGMGSIGQG CHHHHHHHHCCCCHHHHHHCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCC RMTTHQQKKLDVEQLKAFRDRFRLPLSDEDVEQLRFYKPAENSPEMQYLHARRVALGGYL CCCCCHHHCCCHHHHHHHHHHCCCCCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHCCCC PRRRAAASRTPTVPALPSWGQFALEANGKEMSTTMAVVRMLGSLLKDASLGPRVVPVVAD CHHHHHCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEECC EARTFGMANLFRQVGIYSPLGQLYEPEDMGSMLYYREDTGGQILEEGISEAGAVSSWIAA HHHHHHHHHHHHHHCCCCCHHHCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHH ATSYSVHDLAMLPFYIYYSMFGFQRIGDLIWAAADQRARGFLIGATAGKTTLGGEGLQHQ HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCC DGTSHLAASTVPNCRSYDPAFAFEVALIVDEGMREMLERQRDVFYYLTVTNENYAQPSLP CCCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCC AAVSVDTVREGVLKGMYPLDQASLETAQVQLLGAGAILGEVQAAARMLRDDWNIPAAVWS CCEEHHHHHHHHHHCCCCCCHHHHHHHHEEEEECHHHHHHHHHHHHHHHHCCCCCHHHHH VTSFTELHRNGVAAERAERLFDDAQHALPYVTSALAAVRGPVIAATDYVRAVPELIRAYV HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHC PRRYVTLGTDGFGRSDTRAALRAFFEVDRASIAIAALKALADEGASERDIVRQAIDRYGK CCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCC RDGDNGAPWER CCCCCCCCCCC >Mature Secondary Structure TDLSSGARPVVALTQARIDSDPQETAEWLAALDGVVQHVGLERAQYLFDRLAAHALGNG CCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC VATARANVTPYANTISVDQQPPYPGDLDTEEKLAAALRWNALAMVVRANRAYGELGGHIA CEEEECCCCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH SYASAADLFEVGFNHFFRAASTRQDGNDARGGDLVYFQPHSSPGVYARAFLEGFLDETHL HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHH EHYRREIAGPGLCSYPHPWLMPDFWQFPTGSMGIGPINAIYQARFMRYLQNRGLLKTEGR HHHHHHHCCCCCCCCCCCCCCCCHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEECCC KVWGFFGDGEMDEPESIGALSLAAREGLDNLVFVINCNLQRLDGPVRSNGRIIDELEAQF EEEEEECCCCCCCCHHCCHHHHHHHCCCCCEEEEEECCHHHCCCCCCCCCCCHHHHHHHH TGAGWNVIKVLWGSDWDALFARDRTGALLRAFAHTVDGQFQTFSANDGAYNRERFFGQNP CCCCCEEEEEEECCCHHHHHHCCCHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHCCCCC ELEALAAHLSNDDIDRLRRGGHDVRKLHAAYDRALKHRGQPTVILAKTMKGFGMGSIGQG CHHHHHHHHCCCCHHHHHHCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCC RMTTHQQKKLDVEQLKAFRDRFRLPLSDEDVEQLRFYKPAENSPEMQYLHARRVALGGYL CCCCCHHHCCCHHHHHHHHHHCCCCCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHCCCC PRRRAAASRTPTVPALPSWGQFALEANGKEMSTTMAVVRMLGSLLKDASLGPRVVPVVAD CHHHHHCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEECC EARTFGMANLFRQVGIYSPLGQLYEPEDMGSMLYYREDTGGQILEEGISEAGAVSSWIAA HHHHHHHHHHHHHHCCCCCHHHCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHH ATSYSVHDLAMLPFYIYYSMFGFQRIGDLIWAAADQRARGFLIGATAGKTTLGGEGLQHQ HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCC DGTSHLAASTVPNCRSYDPAFAFEVALIVDEGMREMLERQRDVFYYLTVTNENYAQPSLP CCCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCC AAVSVDTVREGVLKGMYPLDQASLETAQVQLLGAGAILGEVQAAARMLRDDWNIPAAVWS CCEEHHHHHHHHHHCCCCCCHHHHHHHHEEEEECHHHHHHHHHHHHHHHHCCCCCHHHHH VTSFTELHRNGVAAERAERLFDDAQHALPYVTSALAAVRGPVIAATDYVRAVPELIRAYV HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHC PRRYVTLGTDGFGRSDTRAALRAFFEVDRASIAIAALKALADEGASERDIVRQAIDRYGK CCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCC RDGDNGAPWER CCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9171401; 10984043 [H]