| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is 186476593
Identifier: 186476593
GI number: 186476593
Start: 2097958
End: 2098509
Strand: Reverse
Name: 186476593
Synonym: Bphy_1836
Alternate gene names: NA
Gene position: 2098509-2097958 (Counterclockwise)
Preceding gene: 186476594
Following gene: 186476592
Centisome position: 60.32
GC content: 68.12
Gene sequence:
>552_bases ATGAGCAACATCAACGGGTGGTCTCGTTTGATCAAATGGGTGGCGGCCATAGCCGCGTCGGCGCTGGTGCTCGGCGCATG CGGAACGGTCCGCCAGGCGGGGTCGCCTTCGCTCGCATCGAAGGATGCCGTCGCCGTGGTCACGATGGCGAACTTCACCG AAACGCCGGCGGCGGGCAGCAGCGCGTCCGCCATCGCGGCGAATGCGTTGCGCGCGAACGGTTTCGCCGATGTGCGCCTC GCGCCCGTCGATGCGTCGGCGAACGCGATGTTCGATACCGCGCAGCGCGATATCGGCGAGAAGAAGCTGGCGTGGGCGCG CGAGCAGCATGTGAAGTACGTGCTCACGGGCGCCGTCGAAGAGTGGCGCTACAAGGTCGGCGTCGACGGCGAGCCCGTTG CGGGCGTGACGTTCGAGCTGATCGACGTGGCGTCGGGCCAGGTCGTGTGGAGCGCGACGGGTTCGAAGAGCGGCTGGACG CGTTCGAGCCTCTCGAGCGTCGCTTCGTCGCTGATCGGCAGCCTGCTGTCGCCGCTGCACACGCGCGGCTGA
Upstream 100 bases:
>100_bases AGGTCGGCACGCCCGTGACGATACTCGGCGCGCGCTATCGGTGGTTCTACTGAAGCCGCGACACACTGAGCGAAAAACGA CTTTTCTGAGGAGTGGTTCG
Downstream 100 bases:
>100_bases TGCGCGGGCGCGCAAGCACGGGCGTGAGCATCGCGCATCGTTGCGACGCACGCTGCAACACCCCAGCAATTCGACACGTG ATGAGGAGTCGGCTGTGAAT
Product: hypothetical protein
Products: NA
Alternate protein names: Outer Membrane Lipoprotein
Number of amino acids: Translated: 183; Mature: 182
Protein sequence:
>183_residues MSNINGWSRLIKWVAAIAASALVLGACGTVRQAGSPSLASKDAVAVVTMANFTETPAAGSSASAIAANALRANGFADVRL APVDASANAMFDTAQRDIGEKKLAWAREQHVKYVLTGAVEEWRYKVGVDGEPVAGVTFELIDVASGQVVWSATGSKSGWT RSSLSSVASSLIGSLLSPLHTRG
Sequences:
>Translated_183_residues MSNINGWSRLIKWVAAIAASALVLGACGTVRQAGSPSLASKDAVAVVTMANFTETPAAGSSASAIAANALRANGFADVRL APVDASANAMFDTAQRDIGEKKLAWAREQHVKYVLTGAVEEWRYKVGVDGEPVAGVTFELIDVASGQVVWSATGSKSGWT RSSLSSVASSLIGSLLSPLHTRG >Mature_182_residues SNINGWSRLIKWVAAIAASALVLGACGTVRQAGSPSLASKDAVAVVTMANFTETPAAGSSASAIAANALRANGFADVRLA PVDASANAMFDTAQRDIGEKKLAWAREQHVKYVLTGAVEEWRYKVGVDGEPVAGVTFELIDVASGQVVWSATGSKSGWTR SSLSSVASSLIGSLLSPLHTRG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18890; Mature: 18759
Theoretical pI: Translated: 9.18; Mature: 9.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNINGWSRLIKWVAAIAASALVLGACGTVRQAGSPSLASKDAVAVVTMANFTETPAAGS CCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCEEEEEECCCCCCCCCCC SASAIAANALRANGFADVRLAPVDASANAMFDTAQRDIGEKKLAWAREQHVKYVLTGAVE CCHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH EWRYKVGVDGEPVAGVTFELIDVASGQVVWSATGSKSGWTRSSLSSVASSLIGSLLSPLH HHEEEECCCCCCCCCHHEEEEECCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHH TRG CCC >Mature Secondary Structure SNINGWSRLIKWVAAIAASALVLGACGTVRQAGSPSLASKDAVAVVTMANFTETPAAGS CCCCHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCEEEEEECCCCCCCCCCC SASAIAANALRANGFADVRLAPVDASANAMFDTAQRDIGEKKLAWAREQHVKYVLTGAVE CCHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH EWRYKVGVDGEPVAGVTFELIDVASGQVVWSATGSKSGWTRSSLSSVASSLIGSLLSPLH HHEEEECCCCCCCCCHHEEEEECCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHH TRG CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA