Definition Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence.
Accession NC_010622
Length 3,479,187

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The map label for this gene is 186476588

Identifier: 186476588

GI number: 186476588

Start: 2091437

End: 2092402

Strand: Reverse

Name: 186476588

Synonym: Bphy_1831

Alternate gene names: NA

Gene position: 2092402-2091437 (Counterclockwise)

Preceding gene: 186476589

Following gene: 186476586

Centisome position: 60.14

GC content: 63.77

Gene sequence:

>966_bases
ATGACAGCCAGTTCTCTCGCCCGCCTGGGCGTTTCGTGGATCGTCGTCGCATGCGCGGCCGTGGCGATCCTGTTGCTGTC
GGTTGCATGGGTGCGGCCCGCGCTGGCTGCGTCCAAGCGCGTGTCGTCGACGGGCATCGGTGCCGTTGCATTCTTCTACG
GCGCGAACGTGCAGGCGGAGCGCTTCCAACCGTTCGACACCGTGGTGATCGAGCCAGACAGCGGTTTCGATCCGCGCACG
CATACGGCGCACTGTCCCAACTGGTACGCGTATGTCAGTGTCGGCGAGGTGACGAAACAGCGCGCGTATTACGCCAGGAT
GCCGAAGACCTGGTTCGCGGGCAGCAATACGGCGTGGTCGTCGACGATCGTCGATCAGACGGCACCCGGCTGGCCCGCAT
TCTTCGTCGACGAGATCGTCAAGCCGCTGTGGGAGCGCGGCTATCGCGGCTTTTTTCTCGATACGCTGGATTCGTACCAG
CTTGTCGCGAAGACGGACGTCGAGCGGGTGCACCAGCAGGCAGGCATCGTAGCCGTGCTGCACGCGTTGAAGGCGCGCTA
TCCGCAGGCGCAACTGATACTGAATCGCGGCTTCGATATGCTGCCGCGGGTGCACGAGCAGGTCGCGGCCGTCGCGTTCG
AATCGCTGTTCGGCCGCTGGGACCAGTCGAATCAACGCTACGACGACGTACCGGAGAACGATCGCGAATGGCTGCTTGGT
CAGGCGCGGCAGATTCACGAGCGCTACCGTCTGCCCGTCATTTCAATCGATTACTGCCCGCCCGGCAACGATACCTGCCG
CCGCGACATCGTGCGGAAGATCGCGGCGCTCGGCCTCGTGCCCTATGTGACGGATGGCGGTTTGCAGACTATTGGCGACG
GTGGCACAGTGCTCGGCGACAGGGCGCCGCTGAGGAAGGTGAAGTTCAGGCGCCGACGCTCAGTGACGCTCACTGACACT
CAGTGA

Upstream 100 bases:

>100_bases
TGATTCTCGTCGTCGCCGCGGTGCAGCTGCTCGATCGCAAGTTCGGCAAGCTCGAATACGAAACCTACATGCTGCGCAAC
TAGGCGCTACGTGTCCGATC

Downstream 100 bases:

>100_bases
CACTCAGCGCAACTACGTGACGGCCAGCAGCAACACCATGCTGCCGATCGCGCCATCCAGCACGCGCCATGCAGTGGCGC
GCTTGAAGAGCGGGGCAAGC

Product: hypothetical protein

Products: NA

Alternate protein names: Polysaccharide Deacetylase; Polysaccharide Transport System Component Protein

Number of amino acids: Translated: 321; Mature: 320

Protein sequence:

>321_residues
MTASSLARLGVSWIVVACAAVAILLLSVAWVRPALAASKRVSSTGIGAVAFFYGANVQAERFQPFDTVVIEPDSGFDPRT
HTAHCPNWYAYVSVGEVTKQRAYYARMPKTWFAGSNTAWSSTIVDQTAPGWPAFFVDEIVKPLWERGYRGFFLDTLDSYQ
LVAKTDVERVHQQAGIVAVLHALKARYPQAQLILNRGFDMLPRVHEQVAAVAFESLFGRWDQSNQRYDDVPENDREWLLG
QARQIHERYRLPVISIDYCPPGNDTCRRDIVRKIAALGLVPYVTDGGLQTIGDGGTVLGDRAPLRKVKFRRRRSVTLTDT
Q

Sequences:

>Translated_321_residues
MTASSLARLGVSWIVVACAAVAILLLSVAWVRPALAASKRVSSTGIGAVAFFYGANVQAERFQPFDTVVIEPDSGFDPRT
HTAHCPNWYAYVSVGEVTKQRAYYARMPKTWFAGSNTAWSSTIVDQTAPGWPAFFVDEIVKPLWERGYRGFFLDTLDSYQ
LVAKTDVERVHQQAGIVAVLHALKARYPQAQLILNRGFDMLPRVHEQVAAVAFESLFGRWDQSNQRYDDVPENDREWLLG
QARQIHERYRLPVISIDYCPPGNDTCRRDIVRKIAALGLVPYVTDGGLQTIGDGGTVLGDRAPLRKVKFRRRRSVTLTDT
Q
>Mature_320_residues
TASSLARLGVSWIVVACAAVAILLLSVAWVRPALAASKRVSSTGIGAVAFFYGANVQAERFQPFDTVVIEPDSGFDPRTH
TAHCPNWYAYVSVGEVTKQRAYYARMPKTWFAGSNTAWSSTIVDQTAPGWPAFFVDEIVKPLWERGYRGFFLDTLDSYQL
VAKTDVERVHQQAGIVAVLHALKARYPQAQLILNRGFDMLPRVHEQVAAVAFESLFGRWDQSNQRYDDVPENDREWLLGQ
ARQIHERYRLPVISIDYCPPGNDTCRRDIVRKIAALGLVPYVTDGGLQTIGDGGTVLGDRAPLRKVKFRRRRSVTLTDTQ

Specific function: Unknown

COG id: COG3868

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35919; Mature: 35788

Theoretical pI: Translated: 9.26; Mature: 9.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTASSLARLGVSWIVVACAAVAILLLSVAWVRPALAASKRVSSTGIGAVAFFYGANVQAE
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCHH
RFQPFDTVVIEPDSGFDPRTHTAHCPNWYAYVSVGEVTKQRAYYARMPKTWFAGSNTAWS
HCCCCCEEEECCCCCCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHCCCCEECCCCCCCC
STIVDQTAPGWPAFFVDEIVKPLWERGYRGFFLDTLDSYQLVAKTDVERVHQQAGIVAVL
HHHHCCCCCCCCHHHHHHHHHHHHHCCCCCEEHHCCCCHHHHHHHHHHHHHHHHHHHHHH
HALKARYPQAQLILNRGFDMLPRVHEQVAAVAFESLFGRWDQSNQRYDDVPENDREWLLG
HHHHHCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHH
QARQIHERYRLPVISIDYCPPGNDTCRRDIVRKIAALGLVPYVTDGGLQTIGDGGTVLGD
HHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCEECCCCCEECCCCCCCCCC
RAPLRKVKFRRRRSVTLTDTQ
CCHHHHHHHHHHCCCEECCCC
>Mature Secondary Structure 
TASSLARLGVSWIVVACAAVAILLLSVAWVRPALAASKRVSSTGIGAVAFFYGANVQAE
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCHH
RFQPFDTVVIEPDSGFDPRTHTAHCPNWYAYVSVGEVTKQRAYYARMPKTWFAGSNTAWS
HCCCCCEEEECCCCCCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHCCCCEECCCCCCCC
STIVDQTAPGWPAFFVDEIVKPLWERGYRGFFLDTLDSYQLVAKTDVERVHQQAGIVAVL
HHHHCCCCCCCCHHHHHHHHHHHHHCCCCCEEHHCCCCHHHHHHHHHHHHHHHHHHHHHH
HALKARYPQAQLILNRGFDMLPRVHEQVAAVAFESLFGRWDQSNQRYDDVPENDREWLLG
HHHHHCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHH
QARQIHERYRLPVISIDYCPPGNDTCRRDIVRKIAALGLVPYVTDGGLQTIGDGGTVLGD
HHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCEECCCCCEECCCCCCCCCC
RAPLRKVKFRRRRSVTLTDTQ
CCHHHHHHHHHHCCCEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA