| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
Click here to switch to the map view.
The map label for this gene is astE [H]
Identifier: 186476540
GI number: 186476540
Start: 2036627
End: 2037670
Strand: Reverse
Name: astE [H]
Synonym: Bphy_1782
Alternate gene names: 186476540
Gene position: 2037670-2036627 (Counterclockwise)
Preceding gene: 186476541
Following gene: 186476539
Centisome position: 58.57
GC content: 60.92
Gene sequence:
>1044_bases ATGACTTCCAGCGCTGATCCATCGATGCTCGATGACTTCCTCGCGTTCACGCTTGCCGGTCATCGGCCTGCCGACGATGC GCGCGAGGGCGTGGGTGTGAATGGCGTACGCTGGACGTGGATCGACGATGGCGTGCTGCAGTTCGAGCCCGCCACACCGG CGCGGCGCGACGTGCGCAGCGTGCTTGCATCGGCAGGCATTCATGGCGACGAGACGGCGCCCATCGAACTGCTGTCGTTT CTCGTGCGCGATATCGCCAATGGGCGTGCAGCACTCGCTTGCCGATTGCTGGTGATACTCGGCAATGTGCAGGCGATGCG CGAGTCGTGCCGCTATATCGACGACGATCTGAACCGGCTGTTCAGCGGGCGGCATGTGGCATTGCCTGCGAGTCGCGAGA CGCCGCGTGCGCAGGCGCTCGAAGGTATCGCGTTGCGGTTCTTTGCTGGCGCATCGGATGCGCCGGGCGCGCGTTGGCAT GTCGACATGCACACGGCGATTCGCGCTTCCGTATTCGAGCAGTTCGCGTTGTTGCCGCATACGGGGGCACCCTTGTCGCG TGCGATGTTCGAGTGGTTGCGGGACGCGCGGATTGCGGCGGTGTTGTTGCACACGACGAAGGGCAATACGTATTCACATT TCACTGCGTCTGAGTGTGGTGCTCAAGCGTGCACGCTTGAACTTGGAAAGGTGCGGCCGTTTGGTCAGAACGATCTGGTT CGTTTTGCTTTTGCCGATGGCGCGTTACGCCAGATGATCGCGGGCGAGCAGGGTGAGGGTTCATTGGCTTTGCCGCGGGT GTTTACCGTGATCGATCAGATCACCAAGCGGAGCGATTCATTCGAGTTGCTGCTTGCTGACGATGTCGCCAATTTCACGG CTTTTGAGCGCGATACGGTTCTCGCGCGGGATGGCGAGTATCGGTATGTCGTGCGACATGACGAAGAGCGCATCGTCTTT CCTAATGCTGGCGTCAAGCCCGGGCTCCGGGCAGCGTTGCTGGTGGTTGAGACTACCGGCGAGATTCACGCTGGTTTGAA GTAG
Upstream 100 bases:
>100_bases GATCGCCTCGCGCCCGCCGATCTGGCCGATCCGAAGTTGCTGAACGAGTCGCGAACGGCACTCGATGAACTGACGCAGAT TCTTGGCCTGGGTTCGCTGT
Downstream 100 bases:
>100_bases TTCCTTGTCTGGGACGCAGTCGCTGTTGTTGCCTGCGGCGCGGCGTTGCCGGTTTTTTCTTCGCGGGCATCCGCGATGTG CCTTCGTACTTCTTGCGTTG
Product: succinylglutamate desuccinylase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 347; Mature: 346
Protein sequence:
>347_residues MTSSADPSMLDDFLAFTLAGHRPADDAREGVGVNGVRWTWIDDGVLQFEPATPARRDVRSVLASAGIHGDETAPIELLSF LVRDIANGRAALACRLLVILGNVQAMRESCRYIDDDLNRLFSGRHVALPASRETPRAQALEGIALRFFAGASDAPGARWH VDMHTAIRASVFEQFALLPHTGAPLSRAMFEWLRDARIAAVLLHTTKGNTYSHFTASECGAQACTLELGKVRPFGQNDLV RFAFADGALRQMIAGEQGEGSLALPRVFTVIDQITKRSDSFELLLADDVANFTAFERDTVLARDGEYRYVVRHDEERIVF PNAGVKPGLRAALLVVETTGEIHAGLK
Sequences:
>Translated_347_residues MTSSADPSMLDDFLAFTLAGHRPADDAREGVGVNGVRWTWIDDGVLQFEPATPARRDVRSVLASAGIHGDETAPIELLSF LVRDIANGRAALACRLLVILGNVQAMRESCRYIDDDLNRLFSGRHVALPASRETPRAQALEGIALRFFAGASDAPGARWH VDMHTAIRASVFEQFALLPHTGAPLSRAMFEWLRDARIAAVLLHTTKGNTYSHFTASECGAQACTLELGKVRPFGQNDLV RFAFADGALRQMIAGEQGEGSLALPRVFTVIDQITKRSDSFELLLADDVANFTAFERDTVLARDGEYRYVVRHDEERIVF PNAGVKPGLRAALLVVETTGEIHAGLK >Mature_346_residues TSSADPSMLDDFLAFTLAGHRPADDAREGVGVNGVRWTWIDDGVLQFEPATPARRDVRSVLASAGIHGDETAPIELLSFL VRDIANGRAALACRLLVILGNVQAMRESCRYIDDDLNRLFSGRHVALPASRETPRAQALEGIALRFFAGASDAPGARWHV DMHTAIRASVFEQFALLPHTGAPLSRAMFEWLRDARIAAVLLHTTKGNTYSHFTASECGAQACTLELGKVRPFGQNDLVR FAFADGALRQMIAGEQGEGSLALPRVFTVIDQITKRSDSFELLLADDVANFTAFERDTVLARDGEYRYVVRHDEERIVFP NAGVKPGLRAALLVVETTGEIHAGLK
Specific function: Transforms N(2)-succinylglutamate into succinate and glutamate [H]
COG id: COG2988
COG function: function code E; Succinylglutamate desuccinylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the AspA/AstE family. Succinylglutamate desuccinylase subfamily [H]
Homologues:
Organism=Escherichia coli, GI1788040, Length=326, Percent_Identity=44.7852760736196, Blast_Score=278, Evalue=3e-76,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007036 - InterPro: IPR016681 [H]
Pfam domain/function: PF04952 AstE_AspA [H]
EC number: =3.5.1.96 [H]
Molecular weight: Translated: 37910; Mature: 37779
Theoretical pI: Translated: 6.01; Mature: 6.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSSADPSMLDDFLAFTLAGHRPADDAREGVGVNGVRWTWIDDGVLQFEPATPARRDVRS CCCCCCHHHHHHHHHHHHCCCCCCCHHHCCCCCCCEEEEEECCCEEEECCCCCHHHHHHH VLASAGIHGDETAPIELLSFLVRDIANGRAALACRLLVILGNVQAMRESCRYIDDDLNRL HHHHCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH FSGRHVALPASRETPRAQALEGIALRFFAGASDAPGARWHVDMHTAIRASVFEQFALLPH HCCCEEECCCCCCCCHHHHHHHHHEEEEECCCCCCCCEEEEEHHHHHHHHHHHHHHHCCC TGAPLSRAMFEWLRDARIAAVLLHTTKGNTYSHFTASECGAQACTLELGKVRPFGQNDLV CCCHHHHHHHHHHHHCCEEEEEEEECCCCCEEEEEHHHHCCCEEEEECCCCCCCCCCCEE RFAFADGALRQMIAGEQGEGSLALPRVFTVIDQITKRSDSFELLLADDVANFTAFERDTV EEEECCHHHHHHHCCCCCCCCEEHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHCCCEE LARDGEYRYVVRHDEERIVFPNAGVKPGLRAALLVVETTGEIHAGLK EEECCCEEEEEEECCCEEEECCCCCCCCCEEEEEEEEECCCCCCCCC >Mature Secondary Structure TSSADPSMLDDFLAFTLAGHRPADDAREGVGVNGVRWTWIDDGVLQFEPATPARRDVRS CCCCCHHHHHHHHHHHHCCCCCCCHHHCCCCCCCEEEEEECCCEEEECCCCCHHHHHHH VLASAGIHGDETAPIELLSFLVRDIANGRAALACRLLVILGNVQAMRESCRYIDDDLNRL HHHHCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH FSGRHVALPASRETPRAQALEGIALRFFAGASDAPGARWHVDMHTAIRASVFEQFALLPH HCCCEEECCCCCCCCHHHHHHHHHEEEEECCCCCCCCEEEEEHHHHHHHHHHHHHHHCCC TGAPLSRAMFEWLRDARIAAVLLHTTKGNTYSHFTASECGAQACTLELGKVRPFGQNDLV CCCHHHHHHHHHHHHCCEEEEEEEECCCCCEEEEEHHHHCCCEEEEECCCCCCCCCCCEE RFAFADGALRQMIAGEQGEGSLALPRVFTVIDQITKRSDSFELLLADDVANFTAFERDTV EEEECCHHHHHHHCCCCCCCCEEHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHCCCEE LARDGEYRYVVRHDEERIVFPNAGVKPGLRAALLVVETTGEIHAGLK EEECCCEEEEEEECCCEEEECCCCCCCCCEEEEEEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA