| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
Click here to switch to the map view.
The map label for this gene is 186476532
Identifier: 186476532
GI number: 186476532
Start: 2026725
End: 2027189
Strand: Reverse
Name: 186476532
Synonym: Bphy_1774
Alternate gene names: NA
Gene position: 2027189-2026725 (Counterclockwise)
Preceding gene: 186476533
Following gene: 186476528
Centisome position: 58.27
GC content: 63.44
Gene sequence:
>465_bases ATGCCGATTGTTGTCGCCCTGTTTGCCCTGATCGCCCTGATTTACGGCTGTGTGCAGGCGTTCCATGCGCTGTCCGCGCA TTTCGGCCCGGGCGTTGCCGTGGGAGTGGCGCTTCTCTTTGCCGCGCTGGTGCTCGCGGCACTGGGGTGGTGGTGGCGCC GCCACAAGGAAGTCTCGGCGAACATTCGCGACGGCGACTGGACCCATGAGATCAAAGGAGCGTGGGGCGGCGTACGGCTC GCTGCTGGCAAGCGGCTGTGCGACATGCAGGTCGCCGGTTTGCGGGGATCGTATATTTTTGCCGATCTTCGTGGGGCGCA GCCCGTGCGGGACGGCGAGCGGTGGCAGGTGAAGCTGGAAGTGAAAGATGCGGCGCATCCTGAGTGGCGTCTGCCAATGC GTTCCGAGCGCGAGGCTCGGCAATGGGCCAGAATTTTCGCTCTGGCAATGGTGCAGAAGCTTTAA
Upstream 100 bases:
>100_bases GCGGTGCGGCTTCATGCGCCGCGCTTTTAGCTACGTGCCGTCTGCCTGGCATGAAGGGACGCGTTTCCTGTCGATGTAGC GCACTTGCTGGACACAAGCC
Downstream 100 bases:
>100_bases GTGGTTTTTTGTCTGCGCCGCATTCGCAGACAAAAAACCTCAACCCGCATCGACCGCCTTCGCGCGCCGGCCCGGCCCAC GCCGGGCCTCCCACCGAACC
Product: putative signal peptide transmembrane protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 154; Mature: 153
Protein sequence:
>154_residues MPIVVALFALIALIYGCVQAFHALSAHFGPGVAVGVALLFAALVLAALGWWWRRHKEVSANIRDGDWTHEIKGAWGGVRL AAGKRLCDMQVAGLRGSYIFADLRGAQPVRDGERWQVKLEVKDAAHPEWRLPMRSEREARQWARIFALAMVQKL
Sequences:
>Translated_154_residues MPIVVALFALIALIYGCVQAFHALSAHFGPGVAVGVALLFAALVLAALGWWWRRHKEVSANIRDGDWTHEIKGAWGGVRL AAGKRLCDMQVAGLRGSYIFADLRGAQPVRDGERWQVKLEVKDAAHPEWRLPMRSEREARQWARIFALAMVQKL >Mature_153_residues PIVVALFALIALIYGCVQAFHALSAHFGPGVAVGVALLFAALVLAALGWWWRRHKEVSANIRDGDWTHEIKGAWGGVRLA AGKRLCDMQVAGLRGSYIFADLRGAQPVRDGERWQVKLEVKDAAHPEWRLPMRSEREARQWARIFALAMVQKL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17181; Mature: 17050
Theoretical pI: Translated: 10.60; Mature: 10.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPIVVALFALIALIYGCVQAFHALSAHFGPGVAVGVALLFAALVLAALGWWWRRHKEVSA CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC NIRDGDWTHEIKGAWGGVRLAAGKRLCDMQVAGLRGSYIFADLRGAQPVRDGERWQVKLE CCCCCCCHHHHCCCCCCEEECCCCCHHHHHHCCCCCCEEEEECCCCCCCCCCCEEEEEEE VKDAAHPEWRLPMRSEREARQWARIFALAMVQKL ECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHC >Mature Secondary Structure PIVVALFALIALIYGCVQAFHALSAHFGPGVAVGVALLFAALVLAALGWWWRRHKEVSA HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC NIRDGDWTHEIKGAWGGVRLAAGKRLCDMQVAGLRGSYIFADLRGAQPVRDGERWQVKLE CCCCCCCHHHHCCCCCCEEECCCCCHHHHHHCCCCCCEEEEECCCCCCCCCCCEEEEEEE VKDAAHPEWRLPMRSEREARQWARIFALAMVQKL ECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA