Definition Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence.
Accession NC_010622
Length 3,479,187

Click here to switch to the map view.

The map label for this gene is 186476523

Identifier: 186476523

GI number: 186476523

Start: 2013924

End: 2014589

Strand: Reverse

Name: 186476523

Synonym: Bphy_1765

Alternate gene names: NA

Gene position: 2014589-2013924 (Counterclockwise)

Preceding gene: 186476524

Following gene: 186476518

Centisome position: 57.9

GC content: 63.51

Gene sequence:

>666_bases
ATGAGCACGCCACGAATCAAGGAACCGACCAAGAAGGCTTTCCACTTCCCGAAGAGCGCAAAGCAGCCGGCCGCCGAAGC
GAAGAAGCCGTCTGCGAAGGCAGTGGGGGCAGCCGAGCCGAAGCAAGGATCGACGGAAGCTGAAGCCGCGGCGAACGCGC
GCGACACTGCAGACGCGACGCCGAAAGCTGCCAAAGCTGCCAAAGCGGCGAAAGCGCCGAAGGCAGCGAAGACGGTAAAA
GCGCCACGGGCCGCGAAGAAGGTCAGTAGCGTGAAGGCTGAAAAGGCTGCCGTGCCAGCGAGCGACGCCAGGTCCGCCTC
CACCGCAAAGCCGGCAAAGCCGTCCAAGGCGGTCAAGCCGCCGAAGCAAGCGAACGCCGTGAAGAGCACGAAGTCTGCAT
CGGCGTCCGCAATTGACGAAGACAAAAAGCCGCGCGGGAAGAAGGAGAAGGAAAAGGTGGTGCGCGACAGCTTCACGATG
CCGAAGTCCGACTATGCGAAGATCGCCGAACTCAAGCAGCGCTGCCTCGACGCCGGCCTCTCCGTAAAGAAGAGCGAGTT
GCTGCGCGCGGGCCTGAACCTGCTGGCCGTTTCGCCCGCCAGGCGGCTTGTCGCGGCCGTTCAGGAACTCGAAGCCGTGA
AGACGGGACGTCCCGCGAAGTCGTAA

Upstream 100 bases:

>100_bases
GGCCTCGTCGAAAACGCCGGCTGCCACGCCCGGGGCGATGTGGTGGAATTGTCGACCCAAAAACCGTATATACTGTTTAT
ACCGTTAACGAGAGATCGAC

Downstream 100 bases:

>100_bases
TTCGAAACCGCGATGCCGAGACGGGCCGCGTGTGCCGCCGCTGCGTTCGATCCCGGCCGCGCTTATGCCGAACGGCGCGG
GTAGCGCCCGGCGAAATGTG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 221; Mature: 220

Protein sequence:

>221_residues
MSTPRIKEPTKKAFHFPKSAKQPAAEAKKPSAKAVGAAEPKQGSTEAEAAANARDTADATPKAAKAAKAAKAPKAAKTVK
APRAAKKVSSVKAEKAAVPASDARSASTAKPAKPSKAVKPPKQANAVKSTKSASASAIDEDKKPRGKKEKEKVVRDSFTM
PKSDYAKIAELKQRCLDAGLSVKKSELLRAGLNLLAVSPARRLVAAVQELEAVKTGRPAKS

Sequences:

>Translated_221_residues
MSTPRIKEPTKKAFHFPKSAKQPAAEAKKPSAKAVGAAEPKQGSTEAEAAANARDTADATPKAAKAAKAAKAPKAAKTVK
APRAAKKVSSVKAEKAAVPASDARSASTAKPAKPSKAVKPPKQANAVKSTKSASASAIDEDKKPRGKKEKEKVVRDSFTM
PKSDYAKIAELKQRCLDAGLSVKKSELLRAGLNLLAVSPARRLVAAVQELEAVKTGRPAKS
>Mature_220_residues
STPRIKEPTKKAFHFPKSAKQPAAEAKKPSAKAVGAAEPKQGSTEAEAAANARDTADATPKAAKAAKAAKAPKAAKTVKA
PRAAKKVSSVKAEKAAVPASDARSASTAKPAKPSKAVKPPKQANAVKSTKSASASAIDEDKKPRGKKEKEKVVRDSFTMP
KSDYAKIAELKQRCLDAGLSVKKSELLRAGLNLLAVSPARRLVAAVQELEAVKTGRPAKS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22951; Mature: 22819

Theoretical pI: Translated: 11.10; Mature: 11.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTPRIKEPTKKAFHFPKSAKQPAAEAKKPSAKAVGAAEPKQGSTEAEAAANARDTADAT
CCCCCCCCHHHHHHCCCCHHCCCHHHHCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCC
PKAAKAAKAAKAPKAAKTVKAPRAAKKVSSVKAEKAAVPASDARSASTAKPAKPSKAVKP
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCCCCCCCCCC
PKQANAVKSTKSASASAIDEDKKPRGKKEKEKVVRDSFTMPKSDYAKIAELKQRCLDAGL
CHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCC
SVKKSELLRAGLNLLAVSPARRLVAAVQELEAVKTGRPAKS
CCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
STPRIKEPTKKAFHFPKSAKQPAAEAKKPSAKAVGAAEPKQGSTEAEAAANARDTADAT
CCCCCCCHHHHHHCCCCHHCCCHHHHCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCC
PKAAKAAKAAKAPKAAKTVKAPRAAKKVSSVKAEKAAVPASDARSASTAKPAKPSKAVKP
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCCCCCCCCCC
PKQANAVKSTKSASASAIDEDKKPRGKKEKEKVVRDSFTMPKSDYAKIAELKQRCLDAGL
CHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCC
SVKKSELLRAGLNLLAVSPARRLVAAVQELEAVKTGRPAKS
CCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA