Definition Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence.
Accession NC_010622
Length 3,479,187

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The map label for this gene is 186476475

Identifier: 186476475

GI number: 186476475

Start: 1954514

End: 1954966

Strand: Reverse

Name: 186476475

Synonym: Bphy_1717

Alternate gene names: NA

Gene position: 1954966-1954514 (Counterclockwise)

Preceding gene: 186476476

Following gene: 186476473

Centisome position: 56.19

GC content: 62.25

Gene sequence:

>453_bases
ATGACCCCCTATCGCGATATTACCGATGAAGAATGGCAGCGTGTCGCGCCGCTGCTGCCTGAACTACGTCCGCGTTCCGA
ATTGCGCGGCCGTCCGCTCGCTAATACCCGCTCGGTGCTCAACGGCGTGCTCTGGGTGATCTATAGCGGCGCGACCTGGT
CTGCAATGCCGCGCAAATACCCGTCGTATCAAACCTGCCATCGCCGCTTCAAGTCGTGGCATCACGCGGGTGTGTTGCAG
CGTGTGATGGACGAGCTGTTCGGTGAAGCCGGCAACAAGTTGTGCAGCACGATGGAAGCCCGTATGCGCATGCATGCGCC
GAACGCCCACGCTGCCGCCAACGATGCCGCCGATCCGTCCCGGCCTGCCACGCCGCTGTACACGCCACCTTCCGGTGCGC
CCGCGACGCCGCTGGTGTTCAATTACATCAGTCCTTTCAAGAACGCGGCATGA

Upstream 100 bases:

>100_bases
ATGCGGGCGCCACCGCTGTATTTTCAAGATTCGGATTGGTCTGATATGCGCTAATGGGGTGACTCTATATCGTCGAAATA
CTCTTGACGAAGGAGAACAC

Downstream 100 bases:

>100_bases
CGGATCGAACGAATTGAGCGCACGCGATAATGAAAATAAAAAGCCGGCCTCGCGAAGTGACTGCCAGGCCGGCTTTTTTA
CGTCAGGCTTGTTCGGCGCT

Product: putative transposase protein

Products: NA

Alternate protein names: Transposase; IS5 Family Transposase OrfA; ISAca3 Transposase OrfA

Number of amino acids: Translated: 150; Mature: 149

Protein sequence:

>150_residues
MTPYRDITDEEWQRVAPLLPELRPRSELRGRPLANTRSVLNGVLWVIYSGATWSAMPRKYPSYQTCHRRFKSWHHAGVLQ
RVMDELFGEAGNKLCSTMEARMRMHAPNAHAAANDAADPSRPATPLYTPPSGAPATPLVFNYISPFKNAA

Sequences:

>Translated_150_residues
MTPYRDITDEEWQRVAPLLPELRPRSELRGRPLANTRSVLNGVLWVIYSGATWSAMPRKYPSYQTCHRRFKSWHHAGVLQ
RVMDELFGEAGNKLCSTMEARMRMHAPNAHAAANDAADPSRPATPLYTPPSGAPATPLVFNYISPFKNAA
>Mature_149_residues
TPYRDITDEEWQRVAPLLPELRPRSELRGRPLANTRSVLNGVLWVIYSGATWSAMPRKYPSYQTCHRRFKSWHHAGVLQR
VMDELFGEAGNKLCSTMEARMRMHAPNAHAAANDAADPSRPATPLYTPPSGAPATPLVFNYISPFKNAA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16847; Mature: 16716

Theoretical pI: Translated: 9.97; Mature: 9.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPYRDITDEEWQRVAPLLPELRPRSELRGRPLANTRSVLNGVLWVIYSGATWSAMPRKY
CCCCCCCCHHHHHHHHHHHHCCCCHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCC
PSYQTCHRRFKSWHHAGVLQRVMDELFGEAGNKLCSTMEARMRMHAPNAHAAANDAADPS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
RPATPLYTPPSGAPATPLVFNYISPFKNAA
CCCCCCCCCCCCCCCCHHHHHHHHHHCCCC
>Mature Secondary Structure 
TPYRDITDEEWQRVAPLLPELRPRSELRGRPLANTRSVLNGVLWVIYSGATWSAMPRKY
CCCCCCCHHHHHHHHHHHHCCCCHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCC
PSYQTCHRRFKSWHHAGVLQRVMDELFGEAGNKLCSTMEARMRMHAPNAHAAANDAADPS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
RPATPLYTPPSGAPATPLVFNYISPFKNAA
CCCCCCCCCCCCCCCCHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA