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The map label for this gene is pchF [H]

Identifier: 186476464

GI number: 186476464

Start: 1946824

End: 1948404

Strand: Reverse

Name: pchF [H]

Synonym: Bphy_1706

Alternate gene names: 186476464

Gene position: 1948404-1946824 (Counterclockwise)

Preceding gene: 186476465

Following gene: 186476463

Centisome position: 56.0

GC content: 67.49

Gene sequence:

>1581_bases
TTGACACGCACTTTGCCGCCCGACATCTCCGCCGCGACCTTCGATCGCGCGCTGGCCGCCTTCGAAGCAATCGTCGGCGC
CACGCAGGTCGCGGCGTCGCCGACGAGTCTCGCACCGTATGCCGATCCATTCGCGCCGGGACGGCTCGCTGCGTCGTTCG
CGCCATCGGCAGCGCTGCTGCCTGCAAACGTCGACGAGATCCGCGCGGTCCTGCGCGTCGCGAACGAGTACCGCGTCCCG
CTGTGGACGGTGTCGACGGGCCGCAACTTCGCGTACGGCGGCGCGGCGCCGCGTCTGCGGGGCTCGGTGGTGCTCGATCT
GCAGCGGATGAACCGCATTCTCGCCGTCGACGAGCCACTCGCGTATGCGCTCGTCGAGCCAGGCGTGAGCTACTTCGATC
TGCATCATCATCTGCGCGGGCGCGGGTACCGGCTTTGGGTCGATCCGCCCGCGGCAGGCTGGGGCAGCATCATCGGCAAC
ACGCTCGAACGGGGCTTCGGTACGACGGCATACGGCGATCACGCGGCGACACAGTGCGGCATGGAAGTGGTGCTCGCCAA
CGGCGACGTCGTGCGCACGGGCATGGGCGGCATTGAGATCGGCACGGCGTGGCAGGCGTTCCGGCACGGCTACGGGCCGT
CGTTCGATCCGATGTTCATGCAGTCGAACTACGGCATCGTCACGAAGATGGGTGTCTGGCTGATGCCGGCGCCGAGCGCC
TATCTGCTCGGCGAAATCCAGTTCCAGCGCGACGACGATCTGGAAGCAATTGTCGAGACCTTGAGGCCGTTGCGCCTGAA
CGGCACGATCGGCAACCAGGCGGTGATCGAAGGCGGGTTGCGGCGCGCAGCGGGGCTCGGGCCGCGTTCGCAGTGGTACG
AGGGCGCGGGCGTGATGCCGGACAGCGCGATCGCGGCGATGGTCGACAAGCTGGACATCGGCCGCTGGAATCTGCATTAC
GCGCTATACGGTGAGCGCGAAGTGATCGACGCGAAAGAGGCGCTCGTGCGGCGCGCATTCGGCCGCATCGCGGGTGCGCG
CATGCAGTCGAAAACCTATGACGGCAACGCGGAACCGGAAGCGGGCGGCGACCGAAATCTCGCCGGCATTCCGGCGATGA
CGGCGTTCCGGATGCTCGACTGGCGCGGCGGGCGCGGCGCCCACGTGGACTTTTCGCCCGTGTGTCCGGCGACGGGCCGC
GACGCGATGCGGCAGTACACGATGGCGAAGACGCGTGCGAACGAATACGGCTTCGACTACTACGGCGGTTTCACGGCGGG
CGAGCGGCATCTGCATCACATTGCTGCCGCGATTTTCGACAGCAGCGACGCGCGCCAAAGCGAGTTGGCGGGGGACCTGC
TGCGCGCGTGGATGAGCGACGCGCACGGCGCGGGCTACGGCGAGTATCGCTCGCATCTGGTCTACATGGATTTCGCGGCG
GCGCGCTACAACTTCAACGATGGCGCGCTGCTGCGCCTGTCGGAGACGATCAAGGACGCGCTCGATCCGTCGGGCATCCT
GTCGCCGGGCAAGCAGGGCATCTGGCCGGCGGCATTTCGCAACTGGCGCGGCTATACCTAG

Upstream 100 bases:

>100_bases
CGGCACTGAGGATCCACGCGATCCACGCGATCCACGCGACGCGCGTCCTTGGGCGCGGGACATCGTCATGCAAGCAGTCA
GTCGACCATAAGGGAACGCT

Downstream 100 bases:

>100_bases
CGACGAACGAAGAGGCGACATGCAGCGACGCACATTCATCGCAGCAGCCGCGTGGCTGCCGGCGACGGCGGCCTGGCGCA
TGCCGTGGCTGCTTCCGGAC

Product: FAD linked oxidase domain-containing protein

Products: NA

Alternate protein names: P-cresol methylhydroxylase; PCMH [H]

Number of amino acids: Translated: 526; Mature: 525

Protein sequence:

>526_residues
MTRTLPPDISAATFDRALAAFEAIVGATQVAASPTSLAPYADPFAPGRLAASFAPSAALLPANVDEIRAVLRVANEYRVP
LWTVSTGRNFAYGGAAPRLRGSVVLDLQRMNRILAVDEPLAYALVEPGVSYFDLHHHLRGRGYRLWVDPPAAGWGSIIGN
TLERGFGTTAYGDHAATQCGMEVVLANGDVVRTGMGGIEIGTAWQAFRHGYGPSFDPMFMQSNYGIVTKMGVWLMPAPSA
YLLGEIQFQRDDDLEAIVETLRPLRLNGTIGNQAVIEGGLRRAAGLGPRSQWYEGAGVMPDSAIAAMVDKLDIGRWNLHY
ALYGEREVIDAKEALVRRAFGRIAGARMQSKTYDGNAEPEAGGDRNLAGIPAMTAFRMLDWRGGRGAHVDFSPVCPATGR
DAMRQYTMAKTRANEYGFDYYGGFTAGERHLHHIAAAIFDSSDARQSELAGDLLRAWMSDAHGAGYGEYRSHLVYMDFAA
ARYNFNDGALLRLSETIKDALDPSGILSPGKQGIWPAAFRNWRGYT

Sequences:

>Translated_526_residues
MTRTLPPDISAATFDRALAAFEAIVGATQVAASPTSLAPYADPFAPGRLAASFAPSAALLPANVDEIRAVLRVANEYRVP
LWTVSTGRNFAYGGAAPRLRGSVVLDLQRMNRILAVDEPLAYALVEPGVSYFDLHHHLRGRGYRLWVDPPAAGWGSIIGN
TLERGFGTTAYGDHAATQCGMEVVLANGDVVRTGMGGIEIGTAWQAFRHGYGPSFDPMFMQSNYGIVTKMGVWLMPAPSA
YLLGEIQFQRDDDLEAIVETLRPLRLNGTIGNQAVIEGGLRRAAGLGPRSQWYEGAGVMPDSAIAAMVDKLDIGRWNLHY
ALYGEREVIDAKEALVRRAFGRIAGARMQSKTYDGNAEPEAGGDRNLAGIPAMTAFRMLDWRGGRGAHVDFSPVCPATGR
DAMRQYTMAKTRANEYGFDYYGGFTAGERHLHHIAAAIFDSSDARQSELAGDLLRAWMSDAHGAGYGEYRSHLVYMDFAA
ARYNFNDGALLRLSETIKDALDPSGILSPGKQGIWPAAFRNWRGYT
>Mature_525_residues
TRTLPPDISAATFDRALAAFEAIVGATQVAASPTSLAPYADPFAPGRLAASFAPSAALLPANVDEIRAVLRVANEYRVPL
WTVSTGRNFAYGGAAPRLRGSVVLDLQRMNRILAVDEPLAYALVEPGVSYFDLHHHLRGRGYRLWVDPPAAGWGSIIGNT
LERGFGTTAYGDHAATQCGMEVVLANGDVVRTGMGGIEIGTAWQAFRHGYGPSFDPMFMQSNYGIVTKMGVWLMPAPSAY
LLGEIQFQRDDDLEAIVETLRPLRLNGTIGNQAVIEGGLRRAAGLGPRSQWYEGAGVMPDSAIAAMVDKLDIGRWNLHYA
LYGEREVIDAKEALVRRAFGRIAGARMQSKTYDGNAEPEAGGDRNLAGIPAMTAFRMLDWRGGRGAHVDFSPVCPATGRD
AMRQYTMAKTRANEYGFDYYGGFTAGERHLHHIAAAIFDSSDARQSELAGDLLRAWMSDAHGAGYGEYRSHLVYMDFAAA
RYNFNDGALLRLSETIKDALDPSGILSPGKQGIWPAAFRNWRGYT

Specific function: Unknown

COG id: COG0277

COG function: function code C; FAD/FMN-containing dehydrogenases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 FAD-binding PCMH-type domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016166
- InterPro:   IPR016167
- InterPro:   IPR016164
- InterPro:   IPR016168
- InterPro:   IPR004113
- InterPro:   IPR006094
- InterPro:   IPR016170
- InterPro:   IPR016171 [H]

Pfam domain/function: PF02913 FAD-oxidase_C; PF01565 FAD_binding_4 [H]

EC number: =1.17.99.1 [H]

Molecular weight: Translated: 57120; Mature: 56989

Theoretical pI: Translated: 6.80; Mature: 6.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRTLPPDISAATFDRALAAFEAIVGATQVAASPTSLAPYADPFAPGRLAASFAPSAALL
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHCCCCCEEC
PANVDEIRAVLRVANEYRVPLWTVSTGRNFAYGGAAPRLRGSVVLDLQRMNRILAVDEPL
CCCHHHHHHHHHHHHCCCCEEEEEECCCCEECCCCCCCCCCCEEEEHHHCCCEEEECCCH
AYALVEPGVSYFDLHHHLRGRGYRLWVDPPAAGWGSIIGNTLERGFGTTAYGDHAATQCG
HHHHHCCCCHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHCC
MEVVLANGDVVRTGMGGIEIGTAWQAFRHGYGPSFDPMFMQSNYGIVTKMGVWLMPAPSA
EEEEEECCCEEECCCCCEEECHHHHHHHCCCCCCCCCEEEECCCCEEEECCEEEECCCCE
YLLGEIQFQRDDDLEAIVETLRPLRLNGTIGNQAVIEGGLRRAAGLGPRSQWYEGAGVMP
EEEEEEEECCCCCHHHHHHHHCCEEECCCCCCHHHHHHHHHHHHCCCCCHHHCCCCCCCC
DSAIAAMVDKLDIGRWNLHYALYGEREVIDAKEALVRRAFGRIAGARMQSKTYDGNAEPE
HHHHHHHHHHHCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
AGGDRNLAGIPAMTAFRMLDWRGGRGAHVDFSPVCPATGRDAMRQYTMAKTRANEYGFDY
CCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCC
YGGFTAGERHLHHIAAAIFDSSDARQSELAGDLLRAWMSDAHGAGYGEYRSHLVYMDFAA
CCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHCEEEEEEEEH
ARYNFNDGALLRLSETIKDALDPSGILSPGKQGIWPAAFRNWRGYT
HEECCCCCCEEEEHHHHHHHCCCCCCCCCCCCCCCHHHHCCCCCCC
>Mature Secondary Structure 
TRTLPPDISAATFDRALAAFEAIVGATQVAASPTSLAPYADPFAPGRLAASFAPSAALL
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHCCCCCEEC
PANVDEIRAVLRVANEYRVPLWTVSTGRNFAYGGAAPRLRGSVVLDLQRMNRILAVDEPL
CCCHHHHHHHHHHHHCCCCEEEEEECCCCEECCCCCCCCCCCEEEEHHHCCCEEEECCCH
AYALVEPGVSYFDLHHHLRGRGYRLWVDPPAAGWGSIIGNTLERGFGTTAYGDHAATQCG
HHHHHCCCCHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHCC
MEVVLANGDVVRTGMGGIEIGTAWQAFRHGYGPSFDPMFMQSNYGIVTKMGVWLMPAPSA
EEEEEECCCEEECCCCCEEECHHHHHHHCCCCCCCCCEEEECCCCEEEECCEEEECCCCE
YLLGEIQFQRDDDLEAIVETLRPLRLNGTIGNQAVIEGGLRRAAGLGPRSQWYEGAGVMP
EEEEEEEECCCCCHHHHHHHHCCEEECCCCCCHHHHHHHHHHHHCCCCCHHHCCCCCCCC
DSAIAAMVDKLDIGRWNLHYALYGEREVIDAKEALVRRAFGRIAGARMQSKTYDGNAEPE
HHHHHHHHHHHCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
AGGDRNLAGIPAMTAFRMLDWRGGRGAHVDFSPVCPATGRDAMRQYTMAKTRANEYGFDY
CCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCC
YGGFTAGERHLHHIAAAIFDSSDARQSELAGDLLRAWMSDAHGAGYGEYRSHLVYMDFAA
CCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHCEEEEEEEEH
ARYNFNDGALLRLSETIKDALDPSGILSPGKQGIWPAAFRNWRGYT
HEECCCCCCEEEEHHHHHHHCCCCCCCCCCCCCCCHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7929007; 10565539; 3790500; 1846290; 10623531 [H]