| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is 186476412
Identifier: 186476412
GI number: 186476412
Start: 1872370
End: 1873350
Strand: Direct
Name: 186476412
Synonym: Bphy_1654
Alternate gene names: NA
Gene position: 1872370-1873350 (Clockwise)
Preceding gene: 186476409
Following gene: 186476415
Centisome position: 53.82
GC content: 66.87
Gene sequence:
>981_bases ATGAAAGACGCAGCACAGATCGGACTGTTCGGCGCAGCAGGCGCCGCCGGCCGCAGCATCGCCCACGCACTTGGCGCGGC GGGCCGCCGTTATCGCGTGATCGGACGCGGGCGCGACGCGCTGCAGGCGTCGTTCGGACACGATCCGCTTGCCGAAATCG TCACCTGGAACCCGGACGATCCCGCCACGGTCGCGACAGCGGCAGCGGGCCTGCAGACGGCCGTGTATCTCGTCGGCGTG CCGTATCACCAGTTCGGCCAACATCCCGTGCTCATGCAGAAGACGCTCGACGGCTTGCGCGCGGCGGGCGTGCAGCGCCT GATCCTGATGGGCACGGTGTATCCGTACGGGCGGCCGCGCACCCTGCCCGTCACCGAATCGCATCCGCGCGAACCGCATA CGTTCAAGGGCAAGATGCGGCTCGTGCAGGAGAATCTCGTCATCGACGCGCATGGACACGACGGACTCGAAACGCTGGTG CTGCGCCTGCCCGATTTCTACGGTCCGGACGTCGAGCGCAGCTTTCTGCACGGCGTGTTCCAAGGCGCGGCGCGCGGTTC CCGTGCGCAGATGATCGGGCCGATCGACGTGCCGCATGAATTCGTGTTCATACCCGACGTGGGGCCCGTCGTCGAACGGC TGTCGCGTACGCCCGAAGCGTTCGGCCGCGTGCTGCATCTGGCCGGGACAGGCACGATCACGCAGCGCGAAATCGCCGAA CGCGCCTACGCGCTTGCGCAGCGAGAACCCAAGCTGATGGTGGCGGGCAAGACGATGTTGCGTGTCATGGGTCTCTTCGA CCCGATGCTACGCGAACTGGTGGACATGCATTACCTGCTGACCGACCCTGTCGTCATGAACGACTCGGCGCTGACGAAGC TGATCGGTCCTGTCGTGAAGACATCCTACGAGTCGGGAATTGCGCAGTCGCTGGCAGCGGCGCGGCGTGTGGCCGCGCGG GCGGCCGCCCAGGCCGCGTGA
Upstream 100 bases:
>100_bases AAAAGTCAAATTAAACTGAACATCGTTCATTGAACAGTGTTCAGTAAATTTCTTGTGCTCAGCGACACGCATGAAACGGG CACGCTCGACGGGAGGCCTC
Downstream 100 bases:
>100_bases TCGGCAGCGCCGTCTGCTCGCTGGCGTTGGGAGACCGCGCGTGTCAGCTGCCCGCCAGATTGCCCGGCGGAAAGTGGCCG CTCTTGAGCAGAACGGGCGT
Product: NAD-dependent epimerase/dehydratase
Products: NA
Alternate protein names: NAD Dependent Epimerase/Dehydratase Family Protein; Nucleoside-Diphosphate-Sugar Epimerase; NAD-Dependent Epimerase/Dehydratase Family Protein; Sugar Dehydratase/Epimerase; Nucleoside-Diphosphate-Sugar Epimerases; NmrA-Like Protein/Nucleoside-Diphosphate-Sugar Epimerase; NAD Dependent Epimerase/Dehydratase Family; 3-Beta Hydroxysteroid Dehydrogenase; Saccharopine Dehydrogenase; NAD Dependent Epimerase/Dehydratase
Number of amino acids: Translated: 326; Mature: 326
Protein sequence:
>326_residues MKDAAQIGLFGAAGAAGRSIAHALGAAGRRYRVIGRGRDALQASFGHDPLAEIVTWNPDDPATVATAAAGLQTAVYLVGV PYHQFGQHPVLMQKTLDGLRAAGVQRLILMGTVYPYGRPRTLPVTESHPREPHTFKGKMRLVQENLVIDAHGHDGLETLV LRLPDFYGPDVERSFLHGVFQGAARGSRAQMIGPIDVPHEFVFIPDVGPVVERLSRTPEAFGRVLHLAGTGTITQREIAE RAYALAQREPKLMVAGKTMLRVMGLFDPMLRELVDMHYLLTDPVVMNDSALTKLIGPVVKTSYESGIAQSLAAARRVAAR AAAQAA
Sequences:
>Translated_326_residues MKDAAQIGLFGAAGAAGRSIAHALGAAGRRYRVIGRGRDALQASFGHDPLAEIVTWNPDDPATVATAAAGLQTAVYLVGV PYHQFGQHPVLMQKTLDGLRAAGVQRLILMGTVYPYGRPRTLPVTESHPREPHTFKGKMRLVQENLVIDAHGHDGLETLV LRLPDFYGPDVERSFLHGVFQGAARGSRAQMIGPIDVPHEFVFIPDVGPVVERLSRTPEAFGRVLHLAGTGTITQREIAE RAYALAQREPKLMVAGKTMLRVMGLFDPMLRELVDMHYLLTDPVVMNDSALTKLIGPVVKTSYESGIAQSLAAARRVAAR AAAQAA >Mature_326_residues MKDAAQIGLFGAAGAAGRSIAHALGAAGRRYRVIGRGRDALQASFGHDPLAEIVTWNPDDPATVATAAAGLQTAVYLVGV PYHQFGQHPVLMQKTLDGLRAAGVQRLILMGTVYPYGRPRTLPVTESHPREPHTFKGKMRLVQENLVIDAHGHDGLETLV LRLPDFYGPDVERSFLHGVFQGAARGSRAQMIGPIDVPHEFVFIPDVGPVVERLSRTPEAFGRVLHLAGTGTITQREIAE RAYALAQREPKLMVAGKTMLRVMGLFDPMLRELVDMHYLLTDPVVMNDSALTKLIGPVVKTSYESGIAQSLAAARRVAAR AAAQAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35172; Mature: 35172
Theoretical pI: Translated: 9.84; Mature: 9.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKDAAQIGLFGAAGAAGRSIAHALGAAGRRYRVIGRGRDALQASFGHDPLAEIVTWNPDD CCCCHHCCCEECCCCCHHHHHHHHHCCCCEEEEEECCCHHHHHHCCCCCHHHHEEECCCC PATVATAAAGLQTAVYLVGVPYHQFGQHPVLMQKTLDGLRAAGVQRLILMGTVYPYGRPR CHHHHHHHHHHHHEEHEEECCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC TLPVTESHPREPHTFKGKMRLVQENLVIDAHGHDGLETLVLRLPDFYGPDVERSFLHGVF CCCCCCCCCCCCCCHHHHHHEEECCEEEEECCCCCHHHHHHHCCCCCCCCHHHHHHHHHH QGAARGSRAQMIGPIDVPHEFVFIPDVGPVVERLSRTPEAFGRVLHLAGTGTITQREIAE HHHCCCCCCEEECCCCCCCCEEEECCCCHHHHHHHCCHHHHHHEEEECCCCCCHHHHHHH RAYALAQREPKLMVAGKTMLRVMGLFDPMLRELVDMHYLLTDPVVMNDSALTKLIGPVVK HHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCHHHHHHHHHHHH TSYESGIAQSLAAARRVAARAAAQAA HHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MKDAAQIGLFGAAGAAGRSIAHALGAAGRRYRVIGRGRDALQASFGHDPLAEIVTWNPDD CCCCHHCCCEECCCCCHHHHHHHHHCCCCEEEEEECCCHHHHHHCCCCCHHHHEEECCCC PATVATAAAGLQTAVYLVGVPYHQFGQHPVLMQKTLDGLRAAGVQRLILMGTVYPYGRPR CHHHHHHHHHHHHEEHEEECCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC TLPVTESHPREPHTFKGKMRLVQENLVIDAHGHDGLETLVLRLPDFYGPDVERSFLHGVF CCCCCCCCCCCCCCHHHHHHEEECCEEEEECCCCCHHHHHHHCCCCCCCCHHHHHHHHHH QGAARGSRAQMIGPIDVPHEFVFIPDVGPVVERLSRTPEAFGRVLHLAGTGTITQREIAE HHHCCCCCCEEECCCCCCCCEEEECCCCHHHHHHHCCHHHHHHEEEECCCCCCHHHHHHH RAYALAQREPKLMVAGKTMLRVMGLFDPMLRELVDMHYLLTDPVVMNDSALTKLIGPVVK HHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCHHHHHHHHHHHH TSYESGIAQSLAAARRVAARAAAQAA HHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA