| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is 186476391
Identifier: 186476391
GI number: 186476391
Start: 1854899
End: 1855363
Strand: Reverse
Name: 186476391
Synonym: Bphy_1633
Alternate gene names: NA
Gene position: 1855363-1854899 (Counterclockwise)
Preceding gene: 186476394
Following gene: 186476387
Centisome position: 53.33
GC content: 63.66
Gene sequence:
>465_bases ATGGCGAGCTACAACAAGATTCTGCTGTGCTACGACGGCTCGCGCGAAGGCCGCAAGGCATTGCGTTGCGGTGCGAATCT GGCGATGGATCTGGGCGCGGAAACGCATTTGTTATCGGTCGTCGACATGCGATCGAGCATCGCGCAAAGCGCGGGCCTAC TGACGGACGTTGCTTGCGGCAGCTTCGAGAAGACCGCGCGCGAGATCCTGCAGGAAGGCGTCGACTGGCTCACTGAGCGC GGCGTGAAGGCGACGGGGCATTTCGCGTTCGGTCACCCGATCGACGAGATCGCGTCGCTGGCGAGCGAGCTGCACGTCGA TCTCGTCGTGGTCGGGCATCGCTGCCGCACGGGCTTGTCACGCTGGTGGATGGGGGCGGGCAACACGCCGTTGCTGGACC GTGTGTCATGCAGCATTCTGGTCGCATGTTCATCGGCTGCCGAAGAGGAGCAAGCGGCAGCGTGA
Upstream 100 bases:
>100_bases GCTCGGTCCACCGCACTTAGCGTTTTCCAGCCCTTGCATGTGGAATTGCGGCGCACCATGATGCAAGTAAGACCGCGATG GTCGCGGGGAGGGTAAGGAC
Downstream 100 bases:
>100_bases TGCACCGGCGTTGCGTCCACGCGTGCGTCAGCCGTTCAGATCGACGGCTGACAGCTTCCACATAAACAGTCCGTCGCGAC GGAAGATCGCCGAATAGCGC
Product: UspA domain-containing protein
Products: NA
Alternate protein names: UspA Domain-Containing Protein; Universal Stress Protein; Universal Stress Family Protein; Universal Stress Protein Family
Number of amino acids: Translated: 154; Mature: 153
Protein sequence:
>154_residues MASYNKILLCYDGSREGRKALRCGANLAMDLGAETHLLSVVDMRSSIAQSAGLLTDVACGSFEKTAREILQEGVDWLTER GVKATGHFAFGHPIDEIASLASELHVDLVVVGHRCRTGLSRWWMGAGNTPLLDRVSCSILVACSSAAEEEQAAA
Sequences:
>Translated_154_residues MASYNKILLCYDGSREGRKALRCGANLAMDLGAETHLLSVVDMRSSIAQSAGLLTDVACGSFEKTAREILQEGVDWLTER GVKATGHFAFGHPIDEIASLASELHVDLVVVGHRCRTGLSRWWMGAGNTPLLDRVSCSILVACSSAAEEEQAAA >Mature_153_residues ASYNKILLCYDGSREGRKALRCGANLAMDLGAETHLLSVVDMRSSIAQSAGLLTDVACGSFEKTAREILQEGVDWLTERG VKATGHFAFGHPIDEIASLASELHVDLVVVGHRCRTGLSRWWMGAGNTPLLDRVSCSILVACSSAAEEEQAAA
Specific function: Unknown
COG id: COG0589
COG function: function code T; Universal stress protein UspA and related nucleotide-binding proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16464; Mature: 16333
Theoretical pI: Translated: 5.57; Mature: 5.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.9 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 6.5 %Cys+Met (Translated Protein) 3.9 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASYNKILLCYDGSREGRKALRCGANLAMDLGAETHLLSVVDMRSSIAQSAGLLTDVACG CCCCCEEEEEECCCCHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHCC SFEKTAREILQEGVDWLTERGVKATGHFAFGHPIDEIASLASELHVDLVVVGHRCRTGLS CHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHEEECCHHHHHHH RWWMGAGNTPLLDRVSCSILVACSSAAEEEQAAA HHHCCCCCCCCHHHHHHHHHEEECCCCCHHHCCC >Mature Secondary Structure ASYNKILLCYDGSREGRKALRCGANLAMDLGAETHLLSVVDMRSSIAQSAGLLTDVACG CCCCEEEEEECCCCHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHCC SFEKTAREILQEGVDWLTERGVKATGHFAFGHPIDEIASLASELHVDLVVVGHRCRTGLS CHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHEEECCHHHHHHH RWWMGAGNTPLLDRVSCSILVACSSAAEEEQAAA HHHCCCCCCCCHHHHHHHHHEEECCCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA