| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is 186476390
Identifier: 186476390
GI number: 186476390
Start: 1854218
End: 1854871
Strand: Direct
Name: 186476390
Synonym: Bphy_1632
Alternate gene names: NA
Gene position: 1854218-1854871 (Clockwise)
Preceding gene: 186476389
Following gene: 186476392
Centisome position: 53.29
GC content: 67.43
Gene sequence:
>654_bases ATGGCAGGCCTGATTCGTATGAGAGGCGCGGTTGGCCGGTCGGTATTGATCGCGCTGGTCGCGATCGTCGTCGTAGCCGC GCTGGGCTATGCATACGCGTCGCCGTACGTAGCGCTCGACCGGCTCAAACGCGCCGCGGATTCGCGCGACGTCGAAACGG TCAATGAATACGTCGACTATCCCGCGCTGCGCGGCAGTCTCAAGCAGCAGGTCACTGGGCTGCTGACGCGCCGGCTCGAC GTACAGCACAACGGCAATCCACTTGCCGCGATCGGCGCGATGATCGGTGTCGCGTTGATTGGCCCGCTCGTCGATGCCTA TGCGACACCCGATGGCGTCGCCGCGCTGCTCAACGGCATGCCGCCGCGCGGCGAGCCGGGCGAGCGCCCGTCTCCGCCGC CCGCCTCGCCGGCCGGCAACGCGACGGGCACGTCCGCCGGGAATGTAAAGCCCGCGCCTGTGCCCGGCTCAGGCGCGGCG AACGCCAACGGCACGACGCCGCCACAGCCGCCCCAAACGACGGCTGGCTACCGCGGCATCAATGAGTTCGTCGTGAGCTA TCAGCACGGCGTCGGCGACACGCGCTATTCGGCGATCTTCCGTCGCGACGGACTGTTTATGTGGAAGCTGTCAGCCGTCG ATCTGAACGGCTGA
Upstream 100 bases:
>100_bases AAAGCAAGCGGCGTAACGCCTGCTTGCAATCTTCGCGGGATCGTTTCGGCGCCGATCGGGTCCACATCAGATCGAGACTG AAAACGGAGTGTCCCGCACA
Downstream 100 bases:
>100_bases CGCACGCGTGGACGCAACGCCGGTGCATCACGCTGCCGCTTGCTCCTCTTCGGCAGCCGATGAACATGCGACCAGAATGC TGCATGACACACGGTCCAGC
Product: putative transmembrane protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 217; Mature: 216
Protein sequence:
>217_residues MAGLIRMRGAVGRSVLIALVAIVVVAALGYAYASPYVALDRLKRAADSRDVETVNEYVDYPALRGSLKQQVTGLLTRRLD VQHNGNPLAAIGAMIGVALIGPLVDAYATPDGVAALLNGMPPRGEPGERPSPPPASPAGNATGTSAGNVKPAPVPGSGAA NANGTTPPQPPQTTAGYRGINEFVVSYQHGVGDTRYSAIFRRDGLFMWKLSAVDLNG
Sequences:
>Translated_217_residues MAGLIRMRGAVGRSVLIALVAIVVVAALGYAYASPYVALDRLKRAADSRDVETVNEYVDYPALRGSLKQQVTGLLTRRLD VQHNGNPLAAIGAMIGVALIGPLVDAYATPDGVAALLNGMPPRGEPGERPSPPPASPAGNATGTSAGNVKPAPVPGSGAA NANGTTPPQPPQTTAGYRGINEFVVSYQHGVGDTRYSAIFRRDGLFMWKLSAVDLNG >Mature_216_residues AGLIRMRGAVGRSVLIALVAIVVVAALGYAYASPYVALDRLKRAADSRDVETVNEYVDYPALRGSLKQQVTGLLTRRLDV QHNGNPLAAIGAMIGVALIGPLVDAYATPDGVAALLNGMPPRGEPGERPSPPPASPAGNATGTSAGNVKPAPVPGSGAAN ANGTTPPQPPQTTAGYRGINEFVVSYQHGVGDTRYSAIFRRDGLFMWKLSAVDLNG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22443; Mature: 22312
Theoretical pI: Translated: 9.74; Mature: 9.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGLIRMRGAVGRSVLIALVAIVVVAALGYAYASPYVALDRLKRAADSRDVETVNEYVDY CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCHHHHHHHHCC PALRGSLKQQVTGLLTRRLDVQHNGNPLAAIGAMIGVALIGPLVDAYATPDGVAALLNGM HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCC PPRGEPGERPSPPPASPAGNATGTSAGNVKPAPVPGSGAANANGTTPPQPPQTTAGYRGI CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCH NEFVVSYQHGVGDTRYSAIFRRDGLFMWKLSAVDLNG HHHHHHHHCCCCHHHHHHHHHHCCEEEEEEEEECCCC >Mature Secondary Structure AGLIRMRGAVGRSVLIALVAIVVVAALGYAYASPYVALDRLKRAADSRDVETVNEYVDY CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCHHHHHHHHCC PALRGSLKQQVTGLLTRRLDVQHNGNPLAAIGAMIGVALIGPLVDAYATPDGVAALLNGM HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCC PPRGEPGERPSPPPASPAGNATGTSAGNVKPAPVPGSGAANANGTTPPQPPQTTAGYRGI CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCH NEFVVSYQHGVGDTRYSAIFRRDGLFMWKLSAVDLNG HHHHHHHHCCCCHHHHHHHHHHCCEEEEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA