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The map label for this gene is iolB [H]

Identifier: 186476361

GI number: 186476361

Start: 1821118

End: 1821924

Strand: Direct

Name: iolB [H]

Synonym: Bphy_1603

Alternate gene names: 186476361

Gene position: 1821118-1821924 (Clockwise)

Preceding gene: 186476360

Following gene: 186476370

Centisome position: 52.34

GC content: 57.5

Gene sequence:

>807_bases
ATGAGTTTGCTTGTGAAAGCGACGCGCGAAGGACAGACGATCGCGCGTGTCACGCCCGAATCGGCGGGCTGGAGATATGT
CGGTTTCGCTGCGTACAGGATGGAACCGAATGAAGTTGTGCATGTGCTGGAAGCGTCGCGCGAGGTGTGCATCGTGGTGA
TGGCGGGTGCCGTCGATATCGAAACGGATGCGCAGACGTGGACCGCTCTCGGCTCGCGCGACAGTGTGTTCGAGGACAGT
GCGCCCGTGGCTGTGTATTTGCCGCCGAATACGCGTGCGACGGTGCGCGCGAACCGTTTTGCGGAAGTTGGTGTGGCCAG
TGCACCTGGAAAGGGCGAGTATCCGGCGCGGTTGATCGAGCCTTCGCAGATGAAACGCTCGGTGCGCGGCAAGGGCGCGA
ATACGCGGTATGTATGCGATATTCTTCCGCAGACCGAGCCGGCAGAATCGTTGCTGGTTGTCGAGGTACGCACGCCGGGC
GGGCATTCGTCGAGTTATCCGCCGCATAAGCACGATACGAACAATATTCCGGCGGAGAGCTTTCTGGAAGAGACGTACTA
TCATCGGCTGAATCCGCCGCAAGGGTTTGCGTTTCAGCGTGTGTATACGGATGAGCGCGATATCGATGAGTCTCTTGCTG
TTGAGGATCACGACGTCGTGATGGTGCCGAGGGGATATCACCCTGTTGTTGTTCCTTACGGGTACGACTCGTATTACCTC
AATGTCATGGCGGGGCCGACCAGGACCTGGCATTTCAAGAACGATCCTAAGCATGAGTGGATCATAGAGAGGGATGCTAA
AAGTTAG

Upstream 100 bases:

>100_bases
AGGACCCGGCCGTCGCGCCGTCGTATGCTTATGCGCAGAAGGGGTATCGTACGTTGCGCACGCTCGTCGATGCACCCCTC
GATGTCGCACAGGAGGCAGC

Downstream 100 bases:

>100_bases
GTTTTTTTGCCTGCGACGCCAGTCGCCGGTATTGCCTGCGGCGCGGCGTTGCCTGTTTTGGTTTTTTGCTTTTGCTTTTG
TATTTGCTGGCATCCGCGGT

Product: myo-inositol catabolism IolB domain-containing protein

Products: NA

Alternate protein names: 5DG isomerase [H]

Number of amino acids: Translated: 268; Mature: 267

Protein sequence:

>268_residues
MSLLVKATREGQTIARVTPESAGWRYVGFAAYRMEPNEVVHVLEASREVCIVVMAGAVDIETDAQTWTALGSRDSVFEDS
APVAVYLPPNTRATVRANRFAEVGVASAPGKGEYPARLIEPSQMKRSVRGKGANTRYVCDILPQTEPAESLLVVEVRTPG
GHSSSYPPHKHDTNNIPAESFLEETYYHRLNPPQGFAFQRVYTDERDIDESLAVEDHDVVMVPRGYHPVVVPYGYDSYYL
NVMAGPTRTWHFKNDPKHEWIIERDAKS

Sequences:

>Translated_268_residues
MSLLVKATREGQTIARVTPESAGWRYVGFAAYRMEPNEVVHVLEASREVCIVVMAGAVDIETDAQTWTALGSRDSVFEDS
APVAVYLPPNTRATVRANRFAEVGVASAPGKGEYPARLIEPSQMKRSVRGKGANTRYVCDILPQTEPAESLLVVEVRTPG
GHSSSYPPHKHDTNNIPAESFLEETYYHRLNPPQGFAFQRVYTDERDIDESLAVEDHDVVMVPRGYHPVVVPYGYDSYYL
NVMAGPTRTWHFKNDPKHEWIIERDAKS
>Mature_267_residues
SLLVKATREGQTIARVTPESAGWRYVGFAAYRMEPNEVVHVLEASREVCIVVMAGAVDIETDAQTWTALGSRDSVFEDSA
PVAVYLPPNTRATVRANRFAEVGVASAPGKGEYPARLIEPSQMKRSVRGKGANTRYVCDILPQTEPAESLLVVEVRTPGG
HSSSYPPHKHDTNNIPAESFLEETYYHRLNPPQGFAFQRVYTDERDIDESLAVEDHDVVMVPRGYHPVVVPYGYDSYYLN
VMAGPTRTWHFKNDPKHEWIIERDAKS

Specific function: Involved in the isomerization of 5-deoxy-glucuronate (5DG) to 5-dehydro-2-deoxy-D-gluconate (DKG or 2-deoxy-5-keto-D- gluconate) [H]

COG id: COG3718

COG function: function code G; Uncharacterized enzyme involved in inositol metabolism

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the isomerase iolB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011051
- InterPro:   IPR021120
- InterPro:   IPR014710 [H]

Pfam domain/function: PF04962 KduI [H]

EC number: NA

Molecular weight: Translated: 29993; Mature: 29862

Theoretical pI: Translated: 5.83; Mature: 5.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLLVKATREGQTIARVTPESAGWRYVGFAAYRMEPNEVVHVLEASREVCIVVMAGAVDI
CCEEEEECCCCCEEEEECCCCCCEEEEEEEEEEECHHHHHHHHHCCCCEEEEEEECCEEE
ETDAQTWTALGSRDSVFEDSAPVAVYLPPNTRATVRANRFAEVGVASAPGKGEYPARLIE
CCCCHHHEECCCCCCCCCCCCCEEEEECCCCCEEEEECCCEECCCCCCCCCCCCCCEECC
PSQMKRSVRGKGANTRYVCDILPQTEPAESLLVVEVRTPGGHSSSYPPHKHDTNNIPAES
HHHHHHHHCCCCCCCEEEEEECCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCHHH
FLEETYYHRLNPPQGFAFQRVYTDERDIDESLAVEDHDVVMVPRGYHPVVVPYGYDSYYL
HHHHHHHHCCCCCCCCEEEEEECCCCCCCHHHEECCCCEEEECCCCCCEEEECCCCCEEE
NVMAGPTRTWHFKNDPKHEWIIERDAKS
EEEECCCEEEECCCCCCCCEEEEECCCC
>Mature Secondary Structure 
SLLVKATREGQTIARVTPESAGWRYVGFAAYRMEPNEVVHVLEASREVCIVVMAGAVDI
CEEEEECCCCCEEEEECCCCCCEEEEEEEEEEECHHHHHHHHHCCCCEEEEEEECCEEE
ETDAQTWTALGSRDSVFEDSAPVAVYLPPNTRATVRANRFAEVGVASAPGKGEYPARLIE
CCCCHHHEECCCCCCCCCCCCCEEEEECCCCCEEEEECCCEECCCCCCCCCCCCCCEECC
PSQMKRSVRGKGANTRYVCDILPQTEPAESLLVVEVRTPGGHSSSYPPHKHDTNNIPAES
HHHHHHHHCCCCCCCEEEEEECCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCHHH
FLEETYYHRLNPPQGFAFQRVYTDERDIDESLAVEDHDVVMVPRGYHPVVVPYGYDSYYL
HHHHHHHHCCCCCCCCEEEEEECCCCCCCHHHEECCCCEEEECCCCCCEEEECCCCCEEE
NVMAGPTRTWHFKNDPKHEWIIERDAKS
EEEECCCEEEECCCCCCCCEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA