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The map label for this gene is glcD [H]

Identifier: 186476336

GI number: 186476336

Start: 1787311

End: 1788738

Strand: Direct

Name: glcD [H]

Synonym: Bphy_1578

Alternate gene names: 186476336

Gene position: 1787311-1788738 (Clockwise)

Preceding gene: 186476335

Following gene: 186476337

Centisome position: 51.37

GC content: 65.41

Gene sequence:

>1428_bases
ATGAATTCCGTTGCTCCATCGTCCTTCCTCGTCGCATGCACCGACGCCATCGGCGCTGCGCATGTCCTCACCGATCCGCA
CGACACCGCCCCCTATCTGACCGACTGGCGCCGCCGCTACACGGGCAACGCGTGCGCGGTACTGTGTCCGTCGACGGCCG
AAGAAGTCGCCGCGCTCGTGCGCATTGCCAACCAGCACCGTATCGCACTCGTGCCTCAAGGCGGCAACACGGGCCTTGCG
GGCGGCGCCACACCGGATGAAAGCGGCGCGCAAGCCGTGCTGAGTCTCAAGCGCCTGAATCGCGTGCGCGACGTCGATCC
GCACAACAACACGATCACCGTCGAAGCGGGCGTCGTGCTGGCCGAGGTGCAGGCGCGCGCCGCTGCCGCGGGACGCCTCT
TCCCGCTGAGCCTCGCGGCGCAAGGCAGTTGCACGATCGGCGGCAATCTGTCGACCAACGCGGGCGGCACGGGCGTGCTG
CGCTACGGCAACACGCGCGAACTGTGTCTCGGGCTCGAAGTCGTGACGCCGCAGGGCGAGGTGTGGGACGGACTGCGCGG
ATTGCGCAAGGACAACACGGGCTACGATCTGCGCGATCTTTTCATCGGCGCGGAAGGCACGCTCGGCATCATCACGGCTG
CCGTCATGAAACTGCATCCGCAGCCGGCCGCGCAGGTGACGGCCCTCGCCGCGCTGCCGTCGCCGCATGCCGCGCTCGAT
TTCCTGTCGCTCGCGCAGCGTCACACCGGACCGTTGCTGACGGGCTTCGAACTGATGTCGGATTTCTGCCTGCGGCTCGT
GAACCGCCATTTCCCGCAGATGCGCTATCCGTTCGCCGAGCCGCACGCGCAGATCGTGCTGCTCGAGCTGTCGGACAGCG
AGAGCGAGGAGCACGCGCGCGCCCTCTTCGAACGGCTGATGGAGACGGCGCTCGAAGATGGTCTCGTCGAAGATGCCGTG
GTCGCGGAAAATCTCGCGCAATCGCGGGGGTTCTGGAATCTGCGCGAACACATTCCGCTCGCGCAGGCGGAGGAAGGGCT
GAACATCAAGCACGATATCGCGGTGCCGATTTCACGCATCGGCCACTTCATCGAGGAAACGGACGCGGCAATCGCGAAGG
CCGTGCCGGGCGCGCGCATGGTCACGTTCGGCCATCTCGGCGACGGCAATCTGCATTACAACGTGCAGGCGCCCGAAGGC
GTCGATGCGAAACCGTTTCTCGCGCAATACCAAAGCGCGATGAACCGGATCGTCTACGACAGCGTGCATCGGCATCGCGG
CAGCGTCAGCGCGGAACACGGCGTGGGTCAGTTGAAGATCGACGAAGCGGCGCACTACAAGTCGGACGTCGAAGTGCGTC
TGATGAAGACGCTGAAAGCGGCGTTCGATCCGCTGAACCTGATGAATCCCGGCAAGGTGCTACGCTAG

Upstream 100 bases:

>100_bases
GATGCGGCGCCAGCCGGGCCGCCCCGCGCCTCACCGCACCAACCGCAAACGTCGCCTCACGTCCAAGCCGAAACACGTTT
CACCGCCCTGACCGACCAAC

Downstream 100 bases:

>100_bases
CTTGATACGAAACCGATTCCGAATCGACGAGAGGCGTCCATGAAAATTCGCGTGCTGTCCGATCTTCATTTGGAAAACGA
CGCGCCGGAAATCATCCCGC

Product: FAD linked oxidase domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 475; Mature: 475

Protein sequence:

>475_residues
MNSVAPSSFLVACTDAIGAAHVLTDPHDTAPYLTDWRRRYTGNACAVLCPSTAEEVAALVRIANQHRIALVPQGGNTGLA
GGATPDESGAQAVLSLKRLNRVRDVDPHNNTITVEAGVVLAEVQARAAAAGRLFPLSLAAQGSCTIGGNLSTNAGGTGVL
RYGNTRELCLGLEVVTPQGEVWDGLRGLRKDNTGYDLRDLFIGAEGTLGIITAAVMKLHPQPAAQVTALAALPSPHAALD
FLSLAQRHTGPLLTGFELMSDFCLRLVNRHFPQMRYPFAEPHAQIVLLELSDSESEEHARALFERLMETALEDGLVEDAV
VAENLAQSRGFWNLREHIPLAQAEEGLNIKHDIAVPISRIGHFIEETDAAIAKAVPGARMVTFGHLGDGNLHYNVQAPEG
VDAKPFLAQYQSAMNRIVYDSVHRHRGSVSAEHGVGQLKIDEAAHYKSDVEVRLMKTLKAAFDPLNLMNPGKVLR

Sequences:

>Translated_475_residues
MNSVAPSSFLVACTDAIGAAHVLTDPHDTAPYLTDWRRRYTGNACAVLCPSTAEEVAALVRIANQHRIALVPQGGNTGLA
GGATPDESGAQAVLSLKRLNRVRDVDPHNNTITVEAGVVLAEVQARAAAAGRLFPLSLAAQGSCTIGGNLSTNAGGTGVL
RYGNTRELCLGLEVVTPQGEVWDGLRGLRKDNTGYDLRDLFIGAEGTLGIITAAVMKLHPQPAAQVTALAALPSPHAALD
FLSLAQRHTGPLLTGFELMSDFCLRLVNRHFPQMRYPFAEPHAQIVLLELSDSESEEHARALFERLMETALEDGLVEDAV
VAENLAQSRGFWNLREHIPLAQAEEGLNIKHDIAVPISRIGHFIEETDAAIAKAVPGARMVTFGHLGDGNLHYNVQAPEG
VDAKPFLAQYQSAMNRIVYDSVHRHRGSVSAEHGVGQLKIDEAAHYKSDVEVRLMKTLKAAFDPLNLMNPGKVLR
>Mature_475_residues
MNSVAPSSFLVACTDAIGAAHVLTDPHDTAPYLTDWRRRYTGNACAVLCPSTAEEVAALVRIANQHRIALVPQGGNTGLA
GGATPDESGAQAVLSLKRLNRVRDVDPHNNTITVEAGVVLAEVQARAAAAGRLFPLSLAAQGSCTIGGNLSTNAGGTGVL
RYGNTRELCLGLEVVTPQGEVWDGLRGLRKDNTGYDLRDLFIGAEGTLGIITAAVMKLHPQPAAQVTALAALPSPHAALD
FLSLAQRHTGPLLTGFELMSDFCLRLVNRHFPQMRYPFAEPHAQIVLLELSDSESEEHARALFERLMETALEDGLVEDAV
VAENLAQSRGFWNLREHIPLAQAEEGLNIKHDIAVPISRIGHFIEETDAAIAKAVPGARMVTFGHLGDGNLHYNVQAPEG
VDAKPFLAQYQSAMNRIVYDSVHRHRGSVSAEHGVGQLKIDEAAHYKSDVEVRLMKTLKAAFDPLNLMNPGKVLR

Specific function: Unknown

COG id: COG0277

COG function: function code C; FAD/FMN-containing dehydrogenases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 FAD-binding PCMH-type domain [H]

Homologues:

Organism=Homo sapiens, GI119964728, Length=471, Percent_Identity=38.8535031847134, Blast_Score=286, Evalue=4e-77,
Organism=Homo sapiens, GI37595756, Length=440, Percent_Identity=30.4545454545455, Blast_Score=164, Evalue=2e-40,
Organism=Homo sapiens, GI37595754, Length=462, Percent_Identity=29.2207792207792, Blast_Score=156, Evalue=4e-38,
Organism=Homo sapiens, GI4501993, Length=190, Percent_Identity=32.1052631578947, Blast_Score=100, Evalue=3e-21,
Organism=Escherichia coli, GI1789351, Length=490, Percent_Identity=29.1836734693878, Blast_Score=154, Evalue=9e-39,
Organism=Escherichia coli, GI1787977, Length=512, Percent_Identity=25, Blast_Score=88, Evalue=1e-18,
Organism=Caenorhabditis elegans, GI17534361, Length=475, Percent_Identity=33.4736842105263, Blast_Score=261, Evalue=4e-70,
Organism=Caenorhabditis elegans, GI71992373, Length=446, Percent_Identity=28.9237668161435, Blast_Score=146, Evalue=3e-35,
Organism=Caenorhabditis elegans, GI71992381, Length=442, Percent_Identity=28.0542986425339, Blast_Score=134, Evalue=7e-32,
Organism=Caenorhabditis elegans, GI71992392, Length=356, Percent_Identity=30.0561797752809, Blast_Score=126, Evalue=2e-29,
Organism=Caenorhabditis elegans, GI17556096, Length=198, Percent_Identity=25.7575757575758, Blast_Score=84, Evalue=1e-16,
Organism=Saccharomyces cerevisiae, GI6320023, Length=460, Percent_Identity=36.304347826087, Blast_Score=311, Evalue=1e-85,
Organism=Saccharomyces cerevisiae, GI6320764, Length=456, Percent_Identity=32.6754385964912, Blast_Score=273, Evalue=5e-74,
Organism=Saccharomyces cerevisiae, GI6320027, Length=442, Percent_Identity=26.6968325791855, Blast_Score=141, Evalue=2e-34,
Organism=Drosophila melanogaster, GI18921117, Length=461, Percent_Identity=36.8763557483731, Blast_Score=273, Evalue=2e-73,
Organism=Drosophila melanogaster, GI24639277, Length=461, Percent_Identity=36.8763557483731, Blast_Score=273, Evalue=2e-73,
Organism=Drosophila melanogaster, GI24639275, Length=461, Percent_Identity=36.8763557483731, Blast_Score=273, Evalue=2e-73,
Organism=Drosophila melanogaster, GI24653753, Length=219, Percent_Identity=29.6803652968037, Blast_Score=97, Evalue=2e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016166
- InterPro:   IPR016167
- InterPro:   IPR016164
- InterPro:   IPR016168
- InterPro:   IPR004113
- InterPro:   IPR004490
- InterPro:   IPR006094
- InterPro:   IPR016171 [H]

Pfam domain/function: PF02913 FAD-oxidase_C; PF01565 FAD_binding_4 [H]

EC number: NA

Molecular weight: Translated: 51037; Mature: 51037

Theoretical pI: Translated: 6.29; Mature: 6.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSVAPSSFLVACTDAIGAAHVLTDPHDTAPYLTDWRRRYTGNACAVLCPSTAEEVAALV
CCCCCCCHHEEEEHHHHCCEEEECCCCCCCCHHHHHHHHHCCCEEEEECCCCHHHHHHHH
RIANQHRIALVPQGGNTGLAGGATPDESGAQAVLSLKRLNRVRDVDPHNNTITVEAGVVL
HHHCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEECCEEE
AEVQARAAAAGRLFPLSLAAQGSCTIGGNLSTNAGGTGVLRYGNTRELCLGLEVVTPQGE
EHHHHHHHHCCCEEEEEEECCCCEEECCCCCCCCCCCEEEEECCCCEEEEEEEEECCCCH
VWDGLRGLRKDNTGYDLRDLFIGAEGTLGIITAAVMKLHPQPAAQVTALAALPSPHAALD
HHHHHHHHCCCCCCCCHHHEEECCCCCHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHH
FLSLAQRHTGPLLTGFELMSDFCLRLVNRHFPQMRYPFAEPHAQIVLLELSDSESEEHAR
HHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCCHHHHH
ALFERLMETALEDGLVEDAVVAENLAQSRGFWNLREHIPLAQAEEGLNIKHDIAVPISRI
HHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHCCCHHHHHCCCCCEEECCCCHHHH
GHFIEETDAAIAKAVPGARMVTFGHLGDGNLHYNVQAPEGVDAKPFLAQYQSAMNRIVYD
HHHHHHHHHHHHHHCCCCEEEEEEECCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHH
SVHRHRGSVSAEHGVGQLKIDEAAHYKSDVEVRLMKTLKAAFDPLNLMNPGKVLR
HHHHHCCCCCCCCCCCEEEECHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure
MNSVAPSSFLVACTDAIGAAHVLTDPHDTAPYLTDWRRRYTGNACAVLCPSTAEEVAALV
CCCCCCCHHEEEEHHHHCCEEEECCCCCCCCHHHHHHHHHCCCEEEEECCCCHHHHHHHH
RIANQHRIALVPQGGNTGLAGGATPDESGAQAVLSLKRLNRVRDVDPHNNTITVEAGVVL
HHHCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEECCEEE
AEVQARAAAAGRLFPLSLAAQGSCTIGGNLSTNAGGTGVLRYGNTRELCLGLEVVTPQGE
EHHHHHHHHCCCEEEEEEECCCCEEECCCCCCCCCCCEEEEECCCCEEEEEEEEECCCCH
VWDGLRGLRKDNTGYDLRDLFIGAEGTLGIITAAVMKLHPQPAAQVTALAALPSPHAALD
HHHHHHHHCCCCCCCCHHHEEECCCCCHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHH
FLSLAQRHTGPLLTGFELMSDFCLRLVNRHFPQMRYPFAEPHAQIVLLELSDSESEEHAR
HHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCCHHHHH
ALFERLMETALEDGLVEDAVVAENLAQSRGFWNLREHIPLAQAEEGLNIKHDIAVPISRI
HHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHCCCHHHHHCCCCCEEECCCCHHHH
GHFIEETDAAIAKAVPGARMVTFGHLGDGNLHYNVQAPEGVDAKPFLAQYQSAMNRIVYD
HHHHHHHHHHHHHHCCCCEEEEEEECCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHH
SVHRHRGSVSAEHGVGQLKIDEAAHYKSDVEVRLMKTLKAAFDPLNLMNPGKVLR
HHHHHCCCCCCCCCCCEEEECHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8969504; 9384377 [H]