| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is aroC
Identifier: 186476327
GI number: 186476327
Start: 1777762
End: 1778862
Strand: Reverse
Name: aroC
Synonym: Bphy_1569
Alternate gene names: 186476327
Gene position: 1778862-1777762 (Counterclockwise)
Preceding gene: 186476328
Following gene: 186476326
Centisome position: 51.13
GC content: 66.49
Gene sequence:
>1101_bases ATGTCCGGCAATACCCTCGGTACGCTCTTCACCGTCACGACCTTCGGCGAATCGCACGGCCCGGCTATCGGCTGTGTAAT CGACGGCTGCCCACCGGGTATGTCGCTCGCCGAAGCCGACATCCAGCTTGAACTCGACCGCCGCAAGCCGGGCACGTCGC GCCATGTGACGCAGCGCCAGGAAGAAGACAAGGTCGAGATTCTCTCCGGCGTCTTCGAGGGCAAGACGACGGGCGCGCCG ATTGCACTGCTGATCCGCAATACGGACCAGCGCAGCAAGGACTACGGCAATATCGCCGACACGTTCCGCCCCGGCCACGC CGACTACACCTACTGGCAGAAATTCGGCATACGCGACTATCGCGGCGGCGGCCGTTCGTCCGCGCGCCTGACGGCGCCGA CGGTGGCAGCGGGCGCAGTCGCGAAGAAGTGGCTGCGCGAGAAGTTCGGCACGGAGATTCGCGGCTACATGGCGGCGCTC GGCGAGATCGACGTGCCGTTCATCGACTGGCAGTTCGTGCGCGAGAACCCGTTCTTCGTGCCGAACGCGGATGTCGTGCC GCAACTCGAAGCGTACATGGACGCGTTGCGCAAGGACGGCGATTCGATCGGCGCGCGCATCAACGTGGTTGCGTCGGGCG TGCCCGTCGGACTTGGTGAGCCGCTGTTCGACCGCCTCGACGCCGACATCGCGCATGCAATGATGGGCATCAACGCGGTG AAGGGCGTCGAAATCGGCGCGGGATTCGCGAGCGTGGCGCAGCGCGGCTCCGTGCATGGTGACGAGCTGACGCCGGAAGG CTTCGTCGGCAATCACGCGGGCGGCGTGCTCGGCGGTATTTCGACGGGGCAGGACATCACGGTCTCGATCGCGATCAAGC CGACGTCGAGCATCCGCACGCCGCGCCGCTCGATCGACAAGAACGGGCAGCCCGCCGTCGTCGAAACGTTCGGCCGCCAC GACCCCTGTGTCGGCATTCGTGCCACGCCGATCGCCGAAGCCATGCTCGCCCTCGTGCTGATCGACCATGCGTTGCGGCA CCGCGCGCAATGCGGCGACGTGGTGGTCGGTACGCCGAAGATCGCCGCCAGCGCGCCGTAA
Upstream 100 bases:
>100_bases GTCCATTTGTCCTATCCCACTGGACGGACCGCTGCGCGCTACGGCAGCGCGTCGGGACTGGCATAATATCGCTCTCCCCG CATTTCTTTGGACGACGCTC
Downstream 100 bases:
>100_bases CGCCGGCTCGATCCGGCAGGCTTGACGGTTTCTGACGGGCGTCAACATGCGCGATAACGATCTCACAATGGCCGACCCGC TCGAGCCCCTGCGGGCGCGT
Product: chorismate synthase
Products: NA
Alternate protein names: 5-enolpyruvylshikimate-3-phosphate phospholyase
Number of amino acids: Translated: 366; Mature: 365
Protein sequence:
>366_residues MSGNTLGTLFTVTTFGESHGPAIGCVIDGCPPGMSLAEADIQLELDRRKPGTSRHVTQRQEEDKVEILSGVFEGKTTGAP IALLIRNTDQRSKDYGNIADTFRPGHADYTYWQKFGIRDYRGGGRSSARLTAPTVAAGAVAKKWLREKFGTEIRGYMAAL GEIDVPFIDWQFVRENPFFVPNADVVPQLEAYMDALRKDGDSIGARINVVASGVPVGLGEPLFDRLDADIAHAMMGINAV KGVEIGAGFASVAQRGSVHGDELTPEGFVGNHAGGVLGGISTGQDITVSIAIKPTSSIRTPRRSIDKNGQPAVVETFGRH DPCVGIRATPIAEAMLALVLIDHALRHRAQCGDVVVGTPKIAASAP
Sequences:
>Translated_366_residues MSGNTLGTLFTVTTFGESHGPAIGCVIDGCPPGMSLAEADIQLELDRRKPGTSRHVTQRQEEDKVEILSGVFEGKTTGAP IALLIRNTDQRSKDYGNIADTFRPGHADYTYWQKFGIRDYRGGGRSSARLTAPTVAAGAVAKKWLREKFGTEIRGYMAAL GEIDVPFIDWQFVRENPFFVPNADVVPQLEAYMDALRKDGDSIGARINVVASGVPVGLGEPLFDRLDADIAHAMMGINAV KGVEIGAGFASVAQRGSVHGDELTPEGFVGNHAGGVLGGISTGQDITVSIAIKPTSSIRTPRRSIDKNGQPAVVETFGRH DPCVGIRATPIAEAMLALVLIDHALRHRAQCGDVVVGTPKIAASAP >Mature_365_residues SGNTLGTLFTVTTFGESHGPAIGCVIDGCPPGMSLAEADIQLELDRRKPGTSRHVTQRQEEDKVEILSGVFEGKTTGAPI ALLIRNTDQRSKDYGNIADTFRPGHADYTYWQKFGIRDYRGGGRSSARLTAPTVAAGAVAKKWLREKFGTEIRGYMAALG EIDVPFIDWQFVRENPFFVPNADVVPQLEAYMDALRKDGDSIGARINVVASGVPVGLGEPLFDRLDADIAHAMMGINAVK GVEIGAGFASVAQRGSVHGDELTPEGFVGNHAGGVLGGISTGQDITVSIAIKPTSSIRTPRRSIDKNGQPAVVETFGRHD PCVGIRATPIAEAMLALVLIDHALRHRAQCGDVVVGTPKIAASAP
Specific function: Aromatic amino acids biosynthesis; shikimate pathway; seventh step. [C]
COG id: COG0082
COG function: function code E; Chorismate synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the chorismate synthase family
Homologues:
Organism=Escherichia coli, GI1788669, Length=360, Percent_Identity=65.8333333333333, Blast_Score=466, Evalue=1e-133, Organism=Saccharomyces cerevisiae, GI6321290, Length=367, Percent_Identity=44.141689373297, Blast_Score=295, Evalue=1e-80,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): AROC_BURP8 (B2JK28)
Other databases:
- EMBL: CP001043 - RefSeq: YP_001857797.1 - ProteinModelPortal: B2JK28 - SMR: B2JK28 - GeneID: 6243060 - GenomeReviews: CP001043_GR - KEGG: bph:Bphy_1569 - HOGENOM: HBG292336 - OMA: SRFTTQR - ProtClustDB: PRK05382 - HAMAP: MF_00300_B - InterPro: IPR000453 - InterPro: IPR020541 - PANTHER: PTHR21085 - PIRSF: PIRSF001456 - TIGRFAMs: TIGR00033
Pfam domain/function: PF01264 Chorismate_synt; SSF103263 Chorismate_synth
EC number: =4.2.3.5
Molecular weight: Translated: 38896; Mature: 38764
Theoretical pI: Translated: 6.60; Mature: 6.60
Prosite motif: PS00787 CHORISMATE_SYNTHASE_1; PS00788 CHORISMATE_SYNTHASE_2; PS00789 CHORISMATE_SYNTHASE_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGNTLGTLFTVTTFGESHGPAIGCVIDGCPPGMSLAEADIQLELDRRKPGTSRHVTQRQ CCCCEEEEEEEEEECCCCCCCEEEEEEECCCCCCCEECCCEEEEECCCCCCCCHHHHHHH EEDKVEILSGVFEGKTTGAPIALLIRNTDQRSKDYGNIADTFRPGHADYTYWQKFGIRDY HHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCHHHHCCCCCCCCHHHHHCCCCCC RGGGRSSARLTAPTVAAGAVAKKWLREKFGTEIRGYMAALGEIDVPFIDWQFVRENPFFV CCCCCCCCEEECCHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCEECEEEECCCCCCC PNADVVPQLEAYMDALRKDGDSIGARINVVASGVPVGLGEPLFDRLDADIAHAMMGINAV CCCCCCHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHH KGVEIGAGFASVAQRGSVHGDELTPEGFVGNHAGGVLGGISTGQDITVSIAIKPTSSIRT CCCEECCCHHHHHHCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCEEEEEEEECCHHCCC PRRSIDKNGQPAVVETFGRHDPCVGIRATPIAEAMLALVLIDHALRHRAQCGDVVVGTPK CHHHHCCCCCCHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEECCC IAASAP CCCCCC >Mature Secondary Structure SGNTLGTLFTVTTFGESHGPAIGCVIDGCPPGMSLAEADIQLELDRRKPGTSRHVTQRQ CCCEEEEEEEEEECCCCCCCEEEEEEECCCCCCCEECCCEEEEECCCCCCCCHHHHHHH EEDKVEILSGVFEGKTTGAPIALLIRNTDQRSKDYGNIADTFRPGHADYTYWQKFGIRDY HHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCHHHHCCCCCCCCHHHHHCCCCCC RGGGRSSARLTAPTVAAGAVAKKWLREKFGTEIRGYMAALGEIDVPFIDWQFVRENPFFV CCCCCCCCEEECCHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCEECEEEECCCCCCC PNADVVPQLEAYMDALRKDGDSIGARINVVASGVPVGLGEPLFDRLDADIAHAMMGINAV CCCCCCHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHH KGVEIGAGFASVAQRGSVHGDELTPEGFVGNHAGGVLGGISTGQDITVSIAIKPTSSIRT CCCEECCCHHHHHHCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCEEEEEEEECCHHCCC PRRSIDKNGQPAVVETFGRHDPCVGIRATPIAEAMLALVLIDHALRHRAQCGDVVVGTPK CHHHHCCCCCCHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEECCC IAASAP CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA