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The map label for this gene is uhpA [C]

Identifier: 186476322

GI number: 186476322

Start: 1772303

End: 1772848

Strand: Direct

Name: uhpA [C]

Synonym: Bphy_1564

Alternate gene names: 186476322

Gene position: 1772303-1772848 (Clockwise)

Preceding gene: 186476308

Following gene: 186476325

Centisome position: 50.94

GC content: 63.92

Gene sequence:

>546_bases
ATGCCCGCTCTGGATTATCAAACCGCTTTTCACCTTGCGCCGATCGGCCTCGTGCTGGCGCGCGACCGGATCATCGAAGA
CTGCAACGAACAGCTTGCCGCGATTTTCGGCCGTACGCGCGAGTCGCTGCTCGGGCAGTCGTTCGCGGTGCTCTATCCAT
CGTCCGACGAGTTCGAGCGTATCGGCGAGCGCATACCGCCCATCATGACGGCGCAAGGCAGTTACGCCGACGACCGCATC
ATGAAGCGCGCGAACGGCGAACTCTTCTGGTGCCACGTGACGGGGCGCTCGCTCGATCTGTCGGTCCCGCATGCGGCGGG
CGTCTGGACGTTCGAAGACTTGAGCGCCACGCGGCGCGTCGCGGTGGAGCTGACGCCGCGTGAACGCGAGATCGCCGCGC
AACTGGTGACGGGAAAAACCAGCAAGCAGATTGGACGGATTCTCGACATCAGTTCGCGAACCGTCGACGTTTACCGCGCG
CGCCTGATGCGCAAGTACGGCACGGGCAACGCGACGGAACTGCTGCAGCGTCTGCTCGGGAACTGA

Upstream 100 bases:

>100_bases
CGACGCATCTTGTGATGTGCCGAAAGCGTACGATGCGGCGGCCTTGCGGCACAATACGCAAAAATACATAAGTATTCGTA
CCGCATCCCTCGCCGATTAC

Downstream 100 bases:

>100_bases
CTTTCGTCTGGATGGGGCGCCCACGCTGAACCGCGGGCGCGCGTGGACTGTGAAGAGGCTCAGACCTTCACGAGTTGAGC
GTGTTCGATCGTCGAGCGCA

Product: LuxR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator LuxR Family; Transcriptional Regulator; Two-Component Sensor; Sigma-70 Region 4 Family; PAS/PAC Sensor Protein; Two-Component Hybrid Sensor And Regulator; Transcriptional Regulator Luxr Family; Diguanylate Cyclase/Phosphodiesterase; Transcription Regulator Protein; LuxR Family Regulatory Protein; PAS Domain-Containing Protein

Number of amino acids: Translated: 181; Mature: 180

Protein sequence:

>181_residues
MPALDYQTAFHLAPIGLVLARDRIIEDCNEQLAAIFGRTRESLLGQSFAVLYPSSDEFERIGERIPPIMTAQGSYADDRI
MKRANGELFWCHVTGRSLDLSVPHAAGVWTFEDLSATRRVAVELTPREREIAAQLVTGKTSKQIGRILDISSRTVDVYRA
RLMRKYGTGNATELLQRLLGN

Sequences:

>Translated_181_residues
MPALDYQTAFHLAPIGLVLARDRIIEDCNEQLAAIFGRTRESLLGQSFAVLYPSSDEFERIGERIPPIMTAQGSYADDRI
MKRANGELFWCHVTGRSLDLSVPHAAGVWTFEDLSATRRVAVELTPREREIAAQLVTGKTSKQIGRILDISSRTVDVYRA
RLMRKYGTGNATELLQRLLGN
>Mature_180_residues
PALDYQTAFHLAPIGLVLARDRIIEDCNEQLAAIFGRTRESLLGQSFAVLYPSSDEFERIGERIPPIMTAQGSYADDRIM
KRANGELFWCHVTGRSLDLSVPHAAGVWTFEDLSATRRVAVELTPREREIAAQLVTGKTSKQIGRILDISSRTVDVYRAR
LMRKYGTGNATELLQRLLGN

Specific function: Appears To Be The Positive Activator Of Uhpt Transcription. [C]

COG id: COG2771

COG function: function code K; DNA-binding HTH domain-containing proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20250; Mature: 20119

Theoretical pI: Translated: 8.22; Mature: 8.22

Prosite motif: PS00622 HTH_LUXR_1 ; PS50043 HTH_LUXR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPALDYQTAFHLAPIGLVLARDRIIEDCNEQLAAIFGRTRESLLGQSFAVLYPSSDEFER
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHH
IGERIPPIMTAQGSYADDRIMKRANGELFWCHVTGRSLDLSVPHAAGVWTFEDLSATRRV
HHHHCCCEEECCCCCHHHHHHHHCCCCEEEEEECCCEEEEECCCCCCCEEHHHHCCCEEE
AVELTPREREIAAQLVTGKTSKQIGRILDISSRTVDVYRARLMRKYGTGNATELLQRLLG
EEEECCCHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHC
N
C
>Mature Secondary Structure 
PALDYQTAFHLAPIGLVLARDRIIEDCNEQLAAIFGRTRESLLGQSFAVLYPSSDEFER
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHH
IGERIPPIMTAQGSYADDRIMKRANGELFWCHVTGRSLDLSVPHAAGVWTFEDLSATRRV
HHHHCCCEEECCCCCHHHHHHHHCCCCEEEEEECCCEEEEECCCCCCCEEHHHHCCCEEE
AVELTPREREIAAQLVTGKTSKQIGRILDISSRTVDVYRARLMRKYGTGNATELLQRLLG
EEEECCCHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHC
N
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA