| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is yghU [H]
Identifier: 186476305
GI number: 186476305
Start: 1749171
End: 1749875
Strand: Reverse
Name: yghU [H]
Synonym: Bphy_1547
Alternate gene names: 186476305
Gene position: 1749875-1749171 (Counterclockwise)
Preceding gene: 186476306
Following gene: 186476299
Centisome position: 50.3
GC content: 59.43
Gene sequence:
>705_bases ATGCCTGACCCATCCGTTTTCCCGATCGCGAGAAAGTGGCCCGCCGCACACCCCGAGCGCATTCAACTCTATTCGCTGCC GACCCCGAACGGCGTCAAGGTGTCGATCATGCTGGAAGAAACGGGTCTCGCGTACGAGCCGCATCTGGTCCGCTTCGATT CGAACGATCAGCTCTCGCCGGAATTTGTGTCGCTCAACCCAAACAACAAAATTCCCGCGATCATCGATCCGAATGGGCCA GATGGCGAGCCGCTGCCGCTCTTCGAATCAGGCGCGATCCTGATCTATCTCGCCGACAAGACGGGGCAACTGATGCCGCA GCGCGCGTCTGCTCGCTACGAGACGATTCAATGGGTGATGTTTCAGATGGGCGGCATCGGTCCGATGTTCGGCCAGGTTG GCTTCTTTCACAAGTTCGCCGGCAAGGACTACGAGGACAAGCGTCCGCGCGACCGCTACATTAACGAATCGAAGCGCCTG CTCAACGTGCTGAACGAGCGGCTCGCCACCCGCAAATGGATCATGGGCGACGACTACACGATCGCGGACATCGCGACGTT TCCGTGGGTGCGCAATCTGGTGGGCTTTTATGAGGCGGGCGATCTCGTCGGCTTCGACAACTATCCGCATGTGAAGCGAA CCCTCGACGCGTTTCTGGCGCGTCCTGCTGTCGTCAGAGGGTTGGACATTCCGCAGCGCGGATAA
Upstream 100 bases:
>100_bases CCGTTCACTTAGTCGCACCGGCCGTTCGGCCGCGAGCAAAGTCCGCTCAACCCGTCTATATTGGCCCCTGTTGACCGACA TCTACTGACAAGGATCTTTC
Downstream 100 bases:
>100_bases GCATGTCGCTGCTTCCGGAGTGACGCGTAGGAAAAGCCCGTACCGTCGACGACGATACGGGCTTTTGCTCATCGTTCCAA CAAGGCGGCGTTACGCGCCC
Product: glutathione S-transferase domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 234; Mature: 233
Protein sequence:
>234_residues MPDPSVFPIARKWPAAHPERIQLYSLPTPNGVKVSIMLEETGLAYEPHLVRFDSNDQLSPEFVSLNPNNKIPAIIDPNGP DGEPLPLFESGAILIYLADKTGQLMPQRASARYETIQWVMFQMGGIGPMFGQVGFFHKFAGKDYEDKRPRDRYINESKRL LNVLNERLATRKWIMGDDYTIADIATFPWVRNLVGFYEAGDLVGFDNYPHVKRTLDAFLARPAVVRGLDIPQRG
Sequences:
>Translated_234_residues MPDPSVFPIARKWPAAHPERIQLYSLPTPNGVKVSIMLEETGLAYEPHLVRFDSNDQLSPEFVSLNPNNKIPAIIDPNGP DGEPLPLFESGAILIYLADKTGQLMPQRASARYETIQWVMFQMGGIGPMFGQVGFFHKFAGKDYEDKRPRDRYINESKRL LNVLNERLATRKWIMGDDYTIADIATFPWVRNLVGFYEAGDLVGFDNYPHVKRTLDAFLARPAVVRGLDIPQRG >Mature_233_residues PDPSVFPIARKWPAAHPERIQLYSLPTPNGVKVSIMLEETGLAYEPHLVRFDSNDQLSPEFVSLNPNNKIPAIIDPNGPD GEPLPLFESGAILIYLADKTGQLMPQRASARYETIQWVMFQMGGIGPMFGQVGFFHKFAGKDYEDKRPRDRYINESKRLL NVLNERLATRKWIMGDDYTIADIATFPWVRNLVGFYEAGDLVGFDNYPHVKRTLDAFLARPAVVRGLDIPQRG
Specific function: Unknown
COG id: COG0625
COG function: function code O; Glutathione S-transferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 GST N-terminal domain [H]
Homologues:
Organism=Escherichia coli, GI87082195, Length=219, Percent_Identity=44.2922374429224, Blast_Score=166, Evalue=2e-42, Organism=Escherichia coli, GI1788640, Length=215, Percent_Identity=42.7906976744186, Blast_Score=161, Evalue=3e-41, Organism=Saccharomyces cerevisiae, GI6324100, Length=243, Percent_Identity=31.2757201646091, Blast_Score=103, Evalue=3e-23, Organism=Drosophila melanogaster, GI28571670, Length=180, Percent_Identity=28.3333333333333, Blast_Score=70, Evalue=1e-12, Organism=Drosophila melanogaster, GI45549270, Length=199, Percent_Identity=30.6532663316583, Blast_Score=68, Evalue=4e-12, Organism=Drosophila melanogaster, GI17864592, Length=200, Percent_Identity=28.5, Blast_Score=68, Evalue=5e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010987 - InterPro: IPR004045 - InterPro: IPR017933 - InterPro: IPR004046 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF00043 GST_C; PF02798 GST_N [H]
EC number: NA
Molecular weight: Translated: 26490; Mature: 26358
Theoretical pI: Translated: 6.53; Mature: 6.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPDPSVFPIARKWPAAHPERIQLYSLPTPNGVKVSIMLEETGLAYEPHLVRFDSNDQLSP CCCCCCCCCHHCCCCCCCCEEEEEECCCCCCEEEEEEEECCCCEECCEEEEECCCCCCCC EFVSLNPNNKIPAIIDPNGPDGEPLPLFESGAILIYLADKTGQLMPQRASARYETIQWVM EEEEECCCCCCCEEECCCCCCCCCCCEEECCEEEEEEECCCCCCCCCHHHHHHHHHHHHH FQMGGIGPMFGQVGFFHKFAGKDYEDKRPRDRYINESKRLLNVLNERLATRKWIMGDDYT HHHCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEECCCCCC IADIATFPWVRNLVGFYEAGDLVGFDNYPHVKRTLDAFLARPAVVRGLDIPQRG HHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCHHHCCCCCCCCC >Mature Secondary Structure PDPSVFPIARKWPAAHPERIQLYSLPTPNGVKVSIMLEETGLAYEPHLVRFDSNDQLSP CCCCCCCCHHCCCCCCCCEEEEEECCCCCCEEEEEEEECCCCEECCEEEEECCCCCCCC EFVSLNPNNKIPAIIDPNGPDGEPLPLFESGAILIYLADKTGQLMPQRASARYETIQWVM EEEEECCCCCCCEEECCCCCCCCCCCEEECCEEEEEEECCCCCCCCCHHHHHHHHHHHHH FQMGGIGPMFGQVGFFHKFAGKDYEDKRPRDRYINESKRLLNVLNERLATRKWIMGDDYT HHHCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEECCCCCC IADIATFPWVRNLVGFYEAGDLVGFDNYPHVKRTLDAFLARPAVVRGLDIPQRG HHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]