Definition Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence.
Accession NC_010622
Length 3,479,187

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The map label for this gene is yghU [H]

Identifier: 186476305

GI number: 186476305

Start: 1749171

End: 1749875

Strand: Reverse

Name: yghU [H]

Synonym: Bphy_1547

Alternate gene names: 186476305

Gene position: 1749875-1749171 (Counterclockwise)

Preceding gene: 186476306

Following gene: 186476299

Centisome position: 50.3

GC content: 59.43

Gene sequence:

>705_bases
ATGCCTGACCCATCCGTTTTCCCGATCGCGAGAAAGTGGCCCGCCGCACACCCCGAGCGCATTCAACTCTATTCGCTGCC
GACCCCGAACGGCGTCAAGGTGTCGATCATGCTGGAAGAAACGGGTCTCGCGTACGAGCCGCATCTGGTCCGCTTCGATT
CGAACGATCAGCTCTCGCCGGAATTTGTGTCGCTCAACCCAAACAACAAAATTCCCGCGATCATCGATCCGAATGGGCCA
GATGGCGAGCCGCTGCCGCTCTTCGAATCAGGCGCGATCCTGATCTATCTCGCCGACAAGACGGGGCAACTGATGCCGCA
GCGCGCGTCTGCTCGCTACGAGACGATTCAATGGGTGATGTTTCAGATGGGCGGCATCGGTCCGATGTTCGGCCAGGTTG
GCTTCTTTCACAAGTTCGCCGGCAAGGACTACGAGGACAAGCGTCCGCGCGACCGCTACATTAACGAATCGAAGCGCCTG
CTCAACGTGCTGAACGAGCGGCTCGCCACCCGCAAATGGATCATGGGCGACGACTACACGATCGCGGACATCGCGACGTT
TCCGTGGGTGCGCAATCTGGTGGGCTTTTATGAGGCGGGCGATCTCGTCGGCTTCGACAACTATCCGCATGTGAAGCGAA
CCCTCGACGCGTTTCTGGCGCGTCCTGCTGTCGTCAGAGGGTTGGACATTCCGCAGCGCGGATAA

Upstream 100 bases:

>100_bases
CCGTTCACTTAGTCGCACCGGCCGTTCGGCCGCGAGCAAAGTCCGCTCAACCCGTCTATATTGGCCCCTGTTGACCGACA
TCTACTGACAAGGATCTTTC

Downstream 100 bases:

>100_bases
GCATGTCGCTGCTTCCGGAGTGACGCGTAGGAAAAGCCCGTACCGTCGACGACGATACGGGCTTTTGCTCATCGTTCCAA
CAAGGCGGCGTTACGCGCCC

Product: glutathione S-transferase domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 234; Mature: 233

Protein sequence:

>234_residues
MPDPSVFPIARKWPAAHPERIQLYSLPTPNGVKVSIMLEETGLAYEPHLVRFDSNDQLSPEFVSLNPNNKIPAIIDPNGP
DGEPLPLFESGAILIYLADKTGQLMPQRASARYETIQWVMFQMGGIGPMFGQVGFFHKFAGKDYEDKRPRDRYINESKRL
LNVLNERLATRKWIMGDDYTIADIATFPWVRNLVGFYEAGDLVGFDNYPHVKRTLDAFLARPAVVRGLDIPQRG

Sequences:

>Translated_234_residues
MPDPSVFPIARKWPAAHPERIQLYSLPTPNGVKVSIMLEETGLAYEPHLVRFDSNDQLSPEFVSLNPNNKIPAIIDPNGP
DGEPLPLFESGAILIYLADKTGQLMPQRASARYETIQWVMFQMGGIGPMFGQVGFFHKFAGKDYEDKRPRDRYINESKRL
LNVLNERLATRKWIMGDDYTIADIATFPWVRNLVGFYEAGDLVGFDNYPHVKRTLDAFLARPAVVRGLDIPQRG
>Mature_233_residues
PDPSVFPIARKWPAAHPERIQLYSLPTPNGVKVSIMLEETGLAYEPHLVRFDSNDQLSPEFVSLNPNNKIPAIIDPNGPD
GEPLPLFESGAILIYLADKTGQLMPQRASARYETIQWVMFQMGGIGPMFGQVGFFHKFAGKDYEDKRPRDRYINESKRLL
NVLNERLATRKWIMGDDYTIADIATFPWVRNLVGFYEAGDLVGFDNYPHVKRTLDAFLARPAVVRGLDIPQRG

Specific function: Unknown

COG id: COG0625

COG function: function code O; Glutathione S-transferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 GST N-terminal domain [H]

Homologues:

Organism=Escherichia coli, GI87082195, Length=219, Percent_Identity=44.2922374429224, Blast_Score=166, Evalue=2e-42,
Organism=Escherichia coli, GI1788640, Length=215, Percent_Identity=42.7906976744186, Blast_Score=161, Evalue=3e-41,
Organism=Saccharomyces cerevisiae, GI6324100, Length=243, Percent_Identity=31.2757201646091, Blast_Score=103, Evalue=3e-23,
Organism=Drosophila melanogaster, GI28571670, Length=180, Percent_Identity=28.3333333333333, Blast_Score=70, Evalue=1e-12,
Organism=Drosophila melanogaster, GI45549270, Length=199, Percent_Identity=30.6532663316583, Blast_Score=68, Evalue=4e-12,
Organism=Drosophila melanogaster, GI17864592, Length=200, Percent_Identity=28.5, Blast_Score=68, Evalue=5e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010987
- InterPro:   IPR004045
- InterPro:   IPR017933
- InterPro:   IPR004046
- InterPro:   IPR012336
- InterPro:   IPR012335 [H]

Pfam domain/function: PF00043 GST_C; PF02798 GST_N [H]

EC number: NA

Molecular weight: Translated: 26490; Mature: 26358

Theoretical pI: Translated: 6.53; Mature: 6.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPDPSVFPIARKWPAAHPERIQLYSLPTPNGVKVSIMLEETGLAYEPHLVRFDSNDQLSP
CCCCCCCCCHHCCCCCCCCEEEEEECCCCCCEEEEEEEECCCCEECCEEEEECCCCCCCC
EFVSLNPNNKIPAIIDPNGPDGEPLPLFESGAILIYLADKTGQLMPQRASARYETIQWVM
EEEEECCCCCCCEEECCCCCCCCCCCEEECCEEEEEEECCCCCCCCCHHHHHHHHHHHHH
FQMGGIGPMFGQVGFFHKFAGKDYEDKRPRDRYINESKRLLNVLNERLATRKWIMGDDYT
HHHCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEECCCCCC
IADIATFPWVRNLVGFYEAGDLVGFDNYPHVKRTLDAFLARPAVVRGLDIPQRG
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCHHHCCCCCCCCC
>Mature Secondary Structure 
PDPSVFPIARKWPAAHPERIQLYSLPTPNGVKVSIMLEETGLAYEPHLVRFDSNDQLSP
CCCCCCCCHHCCCCCCCCEEEEEECCCCCCEEEEEEEECCCCEECCEEEEECCCCCCCC
EFVSLNPNNKIPAIIDPNGPDGEPLPLFESGAILIYLADKTGQLMPQRASARYETIQWVM
EEEEECCCCCCCEEECCCCCCCCCCCEEECCEEEEEEECCCCCCCCCHHHHHHHHHHHHH
FQMGGIGPMFGQVGFFHKFAGKDYEDKRPRDRYINESKRLLNVLNERLATRKWIMGDDYT
HHHCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEECCCCCC
IADIATFPWVRNLVGFYEAGDLVGFDNYPHVKRTLDAFLARPAVVRGLDIPQRG
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]