Click here to switch to the map view.

The map label for this gene is lutB [H]

Identifier: 186476221

GI number: 186476221

Start: 1643517

End: 1644929

Strand: Reverse

Name: lutB [H]

Synonym: Bphy_1463

Alternate gene names: 186476221

Gene position: 1644929-1643517 (Counterclockwise)

Preceding gene: 186476222

Following gene: 186476219

Centisome position: 47.28

GC content: 63.27

Gene sequence:

>1413_bases
ATGCAAGTCCAAACGATGCAATTCAAGGCGCGCGCGGGTCAGAAACTCGCCGACCAGCGCCTTCAGCAGAACCTCACCAA
GCTGTCGACGAAATTCGTGTCGGCGCGAGCGTCGGCGATGACCGCCATCGACTTCCCCGCGACGCGCACGGCGCTGAAGG
ACCGGCGCAACCGCGCGCTGGAGAACCTCGACGTGTGGCTCGAAACCTTCGAGCGCGAGGCGACGCGGCGCGGCGCGACT
GTGCTGTTCGCCGAGACGACGCAGGATGCGGCGAAGCTCGTCGCCGACATCGCGCGCAAGCACGACGTGAAGAAGGTGAT
CAAGACGAAGTCGATGGTGTCCGAGGAAATGCGCCTGAACGAGGTGCTCGGGCAGATGGGCGTGCAGTCGATCGAAACCG
ATCTGGGCGAATACATCCTGCAGATCAACGACAACGAGCCGCCGAGCCACATCATTGCGCCCGTCGTTCACAAGGACAAG
GAAGAGATCGCCGACCTGTTCGCGAAGACGCACCAGAAGCCGCGTCTCACAGAAATTCCCGAGATGACGCGTGAAGCGCG
CGAGATGCTGCGTCCGCATTTCATGACGGCCGACATGGGTGTCACGGGCGGCAACTTCGTCATTGCGGAGACGGGGTCGG
TCGCGCTCGTGACCAACGAGGGCAACGAAGGCATGTGTACCGTGATGCCGCGCGTGCACGTCGCGGTGACAGGCATCGAG
AAAGTGCTGCCTACGCTCGAAGACCTCGCAACGGCCATGCGCCTCTTGCCGCGCTCGGCGACGGGGCAGGATGTCTCGAA
CTACTTTTCGGTGCTGACAGGCCCGCGCGGCGTGCACGATCAGGACGGACCGGAGCATATGTATGTGGTGCTCGTCGATG
GCGGGCGCACGGGACTGATCGGCGGGGACTTTCAGGAGATGCTGCGCTGCATCCGCTGCGGCGCGTGCATGAATCATTGC
CCCGTGTATCAGAAGGTCGGTGGGCACACATACGGATGGGTGTACCCCGGGCCGATGGGATCGGTGCTGACGCCGAGCTA
CGTCGGCATCGAAAAGGCGCTTGATTTGCCTCAGGCCGCAACGCTGTGCGGCGAGTGCAATAGCGTGTGTCCCGTCGGCA
TTCCGTTATCCGACCTGTTGCGCAAATTGCGCGAACGGCAGGTAGAACGGCATCTGCGTCCGTGGCAGGAGCGCTTCGGG
CTTGCCGTCTGGGGCTATCTGGCGATGCACCCCACAGCGTACGGACTACTCACGAAACTCGCTGTCCGCATTCTCGAGCG
TATGGGGGGAAGCGGGAAGTCGATCGCGAAACTGCCGTTGGGCGCAGGCTGGACGAACACGCGCGAGATGCCGGCCCCCG
TCGGACGGACGTTCCGCGAACTGTATGCGGCGAGCAAGACGCATATCGGCTAG

Upstream 100 bases:

>100_bases
CTCGCGTGCTGCACATCGCGCAGGTTCTTGCGGGCGACGCGTGAATGTTGCTTCGCCAGCCAGGCGGTAGTTAGTCCCTA
AAACCGATCCCAAGGCCGTC

Downstream 100 bases:

>100_bases
CGGGCGGAGCCCTCACAAGAGGTCGCTGCTATTGAAAGAGGCTGCATCGCTCGCCCGATGCAGCCTCTTTGTCTTCCGGA
TCGCCGCCGACAGCCTGACG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 470; Mature: 470

Protein sequence:

>470_residues
MQVQTMQFKARAGQKLADQRLQQNLTKLSTKFVSARASAMTAIDFPATRTALKDRRNRALENLDVWLETFEREATRRGAT
VLFAETTQDAAKLVADIARKHDVKKVIKTKSMVSEEMRLNEVLGQMGVQSIETDLGEYILQINDNEPPSHIIAPVVHKDK
EEIADLFAKTHQKPRLTEIPEMTREAREMLRPHFMTADMGVTGGNFVIAETGSVALVTNEGNEGMCTVMPRVHVAVTGIE
KVLPTLEDLATAMRLLPRSATGQDVSNYFSVLTGPRGVHDQDGPEHMYVVLVDGGRTGLIGGDFQEMLRCIRCGACMNHC
PVYQKVGGHTYGWVYPGPMGSVLTPSYVGIEKALDLPQAATLCGECNSVCPVGIPLSDLLRKLRERQVERHLRPWQERFG
LAVWGYLAMHPTAYGLLTKLAVRILERMGGSGKSIAKLPLGAGWTNTREMPAPVGRTFRELYAASKTHIG

Sequences:

>Translated_470_residues
MQVQTMQFKARAGQKLADQRLQQNLTKLSTKFVSARASAMTAIDFPATRTALKDRRNRALENLDVWLETFEREATRRGAT
VLFAETTQDAAKLVADIARKHDVKKVIKTKSMVSEEMRLNEVLGQMGVQSIETDLGEYILQINDNEPPSHIIAPVVHKDK
EEIADLFAKTHQKPRLTEIPEMTREAREMLRPHFMTADMGVTGGNFVIAETGSVALVTNEGNEGMCTVMPRVHVAVTGIE
KVLPTLEDLATAMRLLPRSATGQDVSNYFSVLTGPRGVHDQDGPEHMYVVLVDGGRTGLIGGDFQEMLRCIRCGACMNHC
PVYQKVGGHTYGWVYPGPMGSVLTPSYVGIEKALDLPQAATLCGECNSVCPVGIPLSDLLRKLRERQVERHLRPWQERFG
LAVWGYLAMHPTAYGLLTKLAVRILERMGGSGKSIAKLPLGAGWTNTREMPAPVGRTFRELYAASKTHIG
>Mature_470_residues
MQVQTMQFKARAGQKLADQRLQQNLTKLSTKFVSARASAMTAIDFPATRTALKDRRNRALENLDVWLETFEREATRRGAT
VLFAETTQDAAKLVADIARKHDVKKVIKTKSMVSEEMRLNEVLGQMGVQSIETDLGEYILQINDNEPPSHIIAPVVHKDK
EEIADLFAKTHQKPRLTEIPEMTREAREMLRPHFMTADMGVTGGNFVIAETGSVALVTNEGNEGMCTVMPRVHVAVTGIE
KVLPTLEDLATAMRLLPRSATGQDVSNYFSVLTGPRGVHDQDGPEHMYVVLVDGGRTGLIGGDFQEMLRCIRCGACMNHC
PVYQKVGGHTYGWVYPGPMGSVLTPSYVGIEKALDLPQAATLCGECNSVCPVGIPLSDLLRKLRERQVERHLRPWQERFG
LAVWGYLAMHPTAYGLLTKLAVRILERMGGSGKSIAKLPLGAGWTNTREMPAPVGRTFRELYAASKTHIG

Specific function: Is involved in L-lactate degradation and allows cells to grow with lactate as the sole carbon source. Has probably a role as an electron transporter during oxidation of L-lactate [H]

COG id: COG1139

COG function: function code C; Uncharacterized conserved protein containing a ferredoxin-like domain

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]

Homologues:

Organism=Escherichia coli, GI1786498, Length=466, Percent_Identity=37.5536480686695, Blast_Score=353, Evalue=9e-99,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017900
- InterPro:   IPR003741
- InterPro:   IPR004452
- InterPro:   IPR002698
- InterPro:   IPR012285
- InterPro:   IPR009051
- InterPro:   IPR022825 [H]

Pfam domain/function: PF02589 DUF162 [H]

EC number: NA

Molecular weight: Translated: 51933; Mature: 51933

Theoretical pI: Translated: 8.55; Mature: 8.55

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQVQTMQFKARAGQKLADQRLQQNLTKLSTKFVSARASAMTAIDFPATRTALKDRRNRAL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCHHHHHHHHHHHHHH
ENLDVWLETFEREATRRGATVLFAETTQDAAKLVADIARKHDVKKVIKTKSMVSEEMRLN
HHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EVLGQMGVQSIETDLGEYILQINDNEPPSHIIAPVVHKDKEEIADLFAKTHQKPRLTEIP
HHHHHHHHHHHHHHHHHHEEEECCCCCCHHHHHHHHCCCHHHHHHHHHHHCCCCCCCHHH
EMTREAREMLRPHFMTADMGVTGGNFVIAETGSVALVTNEGNEGMCTVMPRVHVAVTGIE
HHHHHHHHHHCCCCEECCCCCCCCCEEEEECCCEEEEECCCCCCEEEECCCHHHHHHHHH
KVLPTLEDLATAMRLLPRSATGQDVSNYFSVLTGPRGVHDQDGPEHMYVVLVDGGRTGLI
HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCCCEEEEEEEECCCCCCC
GGDFQEMLRCIRCGACMNHCPVYQKVGGHTYGWVYPGPMGSVLTPSYVGIEKALDLPQAA
CCCHHHHHHHHHHHHHHHCCCHHHHHCCCEECEECCCCCCCCCCCCHHHHHHHHCCCHHH
TLCGECNSVCPVGIPLSDLLRKLRERQVERHLRPWQERFGLAVWGYLAMHPTAYGLLTKL
HHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHCCHHHHHHHHHCHHHHHHHHHH
AVRILERMGGSGKSIAKLPLGAGWTNTREMPAPVGRTFRELYAASKTHIG
HHHHHHHHCCCCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MQVQTMQFKARAGQKLADQRLQQNLTKLSTKFVSARASAMTAIDFPATRTALKDRRNRAL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCHHHHHHHHHHHHHH
ENLDVWLETFEREATRRGATVLFAETTQDAAKLVADIARKHDVKKVIKTKSMVSEEMRLN
HHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EVLGQMGVQSIETDLGEYILQINDNEPPSHIIAPVVHKDKEEIADLFAKTHQKPRLTEIP
HHHHHHHHHHHHHHHHHHEEEECCCCCCHHHHHHHHCCCHHHHHHHHHHHCCCCCCCHHH
EMTREAREMLRPHFMTADMGVTGGNFVIAETGSVALVTNEGNEGMCTVMPRVHVAVTGIE
HHHHHHHHHHCCCCEECCCCCCCCCEEEEECCCEEEEECCCCCCEEEECCCHHHHHHHHH
KVLPTLEDLATAMRLLPRSATGQDVSNYFSVLTGPRGVHDQDGPEHMYVVLVDGGRTGLI
HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCCCEEEEEEEECCCCCCC
GGDFQEMLRCIRCGACMNHCPVYQKVGGHTYGWVYPGPMGSVLTPSYVGIEKALDLPQAA
CCCHHHHHHHHHHHHHHHCCCHHHHHCCCEECEECCCCCCCCCCCCHHHHHHHHCCCHHH
TLCGECNSVCPVGIPLSDLLRKLRERQVERHLRPWQERFGLAVWGYLAMHPTAYGLLTKL
HHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHCCHHHHHHHHHCHHHHHHHHHH
AVRILERMGGSGKSIAKLPLGAGWTNTREMPAPVGRTFRELYAASKTHIG
HHHHHHHHCCCCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA