| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
Click here to switch to the map view.
The map label for this gene is engA
Identifier: 186476174
GI number: 186476174
Start: 1594964
End: 1596304
Strand: Reverse
Name: engA
Synonym: Bphy_1416
Alternate gene names: 186476174
Gene position: 1596304-1594964 (Counterclockwise)
Preceding gene: 186476175
Following gene: 186476173
Centisome position: 45.88
GC content: 62.94
Gene sequence:
>1341_bases ATGAAACCCGTAATTGCCCTCGTCGGGCGCCCCAATGTGGGGAAATCCACGCTGTTCAACCGGCTCACGCGTTCGCGCGA TGCGCTCGTCGCCGATTTGCCCGGCCTCACGCGCGATCGTCATTACGGCGAAGGGCGAGTGGGCGGCGAACGTCCGTATC TGGTCGTCGATACGGGCGGCTTCGAGCCCGTCGCGAAGGACGGCATCCTGTTCGAGATGGCGCGCCAGACGCGCCAGGCC GTCGAGGAATCGGACGTCATCGTGTTCATTGTCGACGGCCGCAACGGTCTCGCGCCGCAAGACAAATCGATCGCCGACTA TCTGCGCAAGACGGGCCGGCCGATCTTCCTCGTCGTCAACAAGGCCGAGGGGATGAAGTACACGAACGTCGCCGCCGACT TCTACGAACTGGGCCTCGGTGACCCGCGGGCGATTTCCGCCGCGCATGGCGACGGCGTGACCGAGATGATCAACGAGGCG CTCGATGTCGCGTACGCGGGCCAGCCGGAAGAAAGCGACGAGGAAAAGGCGCAGCACGGCATCAAGATCGCCATCGTCGG ACGGCCGAATGTCGGGAAGTCCACGCTGGTTAATACGCTGATCGGCGAAGACCGCGTGATCGCGTTCGACATGCCGGGCA CGACGCGCGACTCGATCTACGTCGACTTCGAGCGGCAAGGCAAAAAATACACGCTGATCGACACGGCGGGCCTGCGCAAG CGCGGCAAGGTGTTCGAGGCGATCGAAAAGTTCTCGGTCGTGAAGACGCTGCAGTCGATTTCCGACGCCAATGTCGTGAT TCTGCTGCTGGACGCGCGCCAGGACATCTCGGAGCAGGACGCGCACATCGCAGGCTTCGTGGTCGAGCAGGGCAGAGCAC TGGTGGTGGGCGTGAACAAGTGGGACGGGCTCGATCCGCATGTGCGTGAGCGCACCAAATCCGATCTTCAGCGCAAGCTA AAATTCCTCGAGTTCGCGAAATTCCACTTCATTTCTGCAGCGGAAAAGACGGGGATCGGGCCGCTGATGCGCTCCGTCGA CGACGCGTACAAGGCCGCGATGTCCAAGCTGCCGACGCCGAAGCTCACGCGCGCGCTGATCGAAGCCGTCGAGTTCCAGC AGCCGCGGCGCCGGGGCCCCGTGCGTCCGAAGCTGCGCTACGCGCACCAGGGGGGACAGAATCCGCCGATCATCGTGATT CACGGCAACGCGCTCGACGCCGTTACCGATACGTACAAGCGTTACCTCGAAAACCGCTTCCGGGAAACTTTCGCGCTGAC GGGCACTCCATTGCGGATAGAGTTCCGGTCCTCGACGAATCCTTACGCGGACAAGGACTGA
Upstream 100 bases:
>100_bases GTGATAATTTTCGTCAAATGCAGCCGTGCAACGGCCGCATGGCGTTGCCAGCGCGGCAGGTCGACCGTTCGACCCTGCGC TTCACTGTGAACAAGATCTG
Downstream 100 bases:
>100_bases CAGAAGGCTGTGAGGCAGGCTGATTCCCGGCTTGAATTCCGGGCTGAAACCCGCATGTACATTGGGTCTTGGCCGAACGG CCAGGCAAAGCGCTGGTCAA
Product: GTP-binding protein EngA
Products: NA
Alternate protein names: GTP-binding protein EngA
Number of amino acids: Translated: 446; Mature: 446
Protein sequence:
>446_residues MKPVIALVGRPNVGKSTLFNRLTRSRDALVADLPGLTRDRHYGEGRVGGERPYLVVDTGGFEPVAKDGILFEMARQTRQA VEESDVIVFIVDGRNGLAPQDKSIADYLRKTGRPIFLVVNKAEGMKYTNVAADFYELGLGDPRAISAAHGDGVTEMINEA LDVAYAGQPEESDEEKAQHGIKIAIVGRPNVGKSTLVNTLIGEDRVIAFDMPGTTRDSIYVDFERQGKKYTLIDTAGLRK RGKVFEAIEKFSVVKTLQSISDANVVILLLDARQDISEQDAHIAGFVVEQGRALVVGVNKWDGLDPHVRERTKSDLQRKL KFLEFAKFHFISAAEKTGIGPLMRSVDDAYKAAMSKLPTPKLTRALIEAVEFQQPRRRGPVRPKLRYAHQGGQNPPIIVI HGNALDAVTDTYKRYLENRFRETFALTGTPLRIEFRSSTNPYADKD
Sequences:
>Translated_446_residues MKPVIALVGRPNVGKSTLFNRLTRSRDALVADLPGLTRDRHYGEGRVGGERPYLVVDTGGFEPVAKDGILFEMARQTRQA VEESDVIVFIVDGRNGLAPQDKSIADYLRKTGRPIFLVVNKAEGMKYTNVAADFYELGLGDPRAISAAHGDGVTEMINEA LDVAYAGQPEESDEEKAQHGIKIAIVGRPNVGKSTLVNTLIGEDRVIAFDMPGTTRDSIYVDFERQGKKYTLIDTAGLRK RGKVFEAIEKFSVVKTLQSISDANVVILLLDARQDISEQDAHIAGFVVEQGRALVVGVNKWDGLDPHVRERTKSDLQRKL KFLEFAKFHFISAAEKTGIGPLMRSVDDAYKAAMSKLPTPKLTRALIEAVEFQQPRRRGPVRPKLRYAHQGGQNPPIIVI HGNALDAVTDTYKRYLENRFRETFALTGTPLRIEFRSSTNPYADKD >Mature_446_residues MKPVIALVGRPNVGKSTLFNRLTRSRDALVADLPGLTRDRHYGEGRVGGERPYLVVDTGGFEPVAKDGILFEMARQTRQA VEESDVIVFIVDGRNGLAPQDKSIADYLRKTGRPIFLVVNKAEGMKYTNVAADFYELGLGDPRAISAAHGDGVTEMINEA LDVAYAGQPEESDEEKAQHGIKIAIVGRPNVGKSTLVNTLIGEDRVIAFDMPGTTRDSIYVDFERQGKKYTLIDTAGLRK RGKVFEAIEKFSVVKTLQSISDANVVILLLDARQDISEQDAHIAGFVVEQGRALVVGVNKWDGLDPHVRERTKSDLQRKL KFLEFAKFHFISAAEKTGIGPLMRSVDDAYKAAMSKLPTPKLTRALIEAVEFQQPRRRGPVRPKLRYAHQGGQNPPIIVI HGNALDAVTDTYKRYLENRFRETFALTGTPLRIEFRSSTNPYADKD
Specific function: GTPase that plays an essential role in the late steps of ribosome biogenesis
COG id: COG1160
COG function: function code R; Predicted GTPases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 KH-like domain
Homologues:
Organism=Escherichia coli, GI87082120, Length=469, Percent_Identity=51.3859275053305, Blast_Score=475, Evalue=1e-135, Organism=Escherichia coli, GI2367268, Length=94, Percent_Identity=37.2340425531915, Blast_Score=69, Evalue=8e-13, Organism=Escherichia coli, GI1788919, Length=122, Percent_Identity=31.9672131147541, Blast_Score=63, Evalue=4e-11, Organism=Caenorhabditis elegans, GI17507259, Length=97, Percent_Identity=37.1134020618557, Blast_Score=69, Evalue=4e-12, Organism=Caenorhabditis elegans, GI115535155, Length=191, Percent_Identity=31.413612565445, Blast_Score=69, Evalue=5e-12, Organism=Saccharomyces cerevisiae, GI6323665, Length=182, Percent_Identity=31.3186813186813, Blast_Score=78, Evalue=3e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): DER_BURP8 (B2JIU7)
Other databases:
- EMBL: CP001043 - RefSeq: YP_001857644.1 - ProteinModelPortal: B2JIU7 - SMR: B2JIU7 - GeneID: 6242907 - GenomeReviews: CP001043_GR - KEGG: bph:Bphy_1416 - HOGENOM: HBG592135 - OMA: TRDRTYQ - ProtClustDB: PRK00093 - GO: GO:0005622 - HAMAP: MF_00195 - InterPro: IPR003593 - InterPro: IPR016484 - InterPro: IPR006073 - InterPro: IPR015946 - InterPro: IPR002917 - InterPro: IPR005225 - Gene3D: G3DSA:3.30.300.20 - PIRSF: PIRSF006485 - PRINTS: PR00326 - SMART: SM00382 - TIGRFAMs: TIGR03594 - TIGRFAMs: TIGR00231
Pfam domain/function: PF01926 MMR_HSR1
EC number: NA
Molecular weight: Translated: 49462; Mature: 49462
Theoretical pI: Translated: 9.52; Mature: 9.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKPVIALVGRPNVGKSTLFNRLTRSRDALVADLPGLTRDRHYGEGRVGGERPYLVVDTGG CCCEEEEECCCCCCHHHHHHHHHHCCCCCEECCCCCCCCCCCCCCCCCCCCCEEEEECCC FEPVAKDGILFEMARQTRQAVEESDVIVFIVDGRNGLAPQDKSIADYLRKTGRPIFLVVN CCCCCCCCHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCHHHHHHHHHCCCEEEEEEE KAEGMKYTNVAADFYELGLGDPRAISAAHGDGVTEMINEALDVAYAGQPEESDEEKAQHG CCCCCEEHHHHHHHHHHCCCCCCEEECCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHCC IKIAIVGRPNVGKSTLVNTLIGEDRVIAFDMPGTTRDSIYVDFERQGKKYTLIDTAGLRK EEEEEEECCCCCHHHHHHHHCCCCEEEEEECCCCCCCCEEEEEECCCCEEEEEECCCCCH RGKVFEAIEKFSVVKTLQSISDANVVILLLDARQDISEQDAHIAGFVVEQGRALVVGVNK HHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCEEEEEEEECCCEEEEECCC WDGLDPHVRERTKSDLQRKLKFLEFAKFHFISAAEKTGIGPLMRSVDDAYKAAMSKLPTP CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCH KLTRALIEAVEFQQPRRRGPVRPKLRYAHQGGQNPPIIVIHGNALDAVTDTYKRYLENRF HHHHHHHHHHHHCCHHHCCCCCCHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHHHHH RETFALTGTPLRIEFRSSTNPYADKD HHHEEECCCEEEEEECCCCCCCCCCC >Mature Secondary Structure MKPVIALVGRPNVGKSTLFNRLTRSRDALVADLPGLTRDRHYGEGRVGGERPYLVVDTGG CCCEEEEECCCCCCHHHHHHHHHHCCCCCEECCCCCCCCCCCCCCCCCCCCCEEEEECCC FEPVAKDGILFEMARQTRQAVEESDVIVFIVDGRNGLAPQDKSIADYLRKTGRPIFLVVN CCCCCCCCHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCHHHHHHHHHCCCEEEEEEE KAEGMKYTNVAADFYELGLGDPRAISAAHGDGVTEMINEALDVAYAGQPEESDEEKAQHG CCCCCEEHHHHHHHHHHCCCCCCEEECCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHCC IKIAIVGRPNVGKSTLVNTLIGEDRVIAFDMPGTTRDSIYVDFERQGKKYTLIDTAGLRK EEEEEEECCCCCHHHHHHHHCCCCEEEEEECCCCCCCCEEEEEECCCCEEEEEECCCCCH RGKVFEAIEKFSVVKTLQSISDANVVILLLDARQDISEQDAHIAGFVVEQGRALVVGVNK HHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCEEEEEEEECCCEEEEECCC WDGLDPHVRERTKSDLQRKLKFLEFAKFHFISAAEKTGIGPLMRSVDDAYKAAMSKLPTP CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCH KLTRALIEAVEFQQPRRRGPVRPKLRYAHQGGQNPPIIVIHGNALDAVTDTYKRYLENRF HHHHHHHHHHHHCCHHHCCCCCCHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHHHHH RETFALTGTPLRIEFRSSTNPYADKD HHHEEECCCEEEEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA