Click here to switch to the map view.

The map label for this gene is hflC [H]

Identifier: 186476170

GI number: 186476170

Start: 1590881

End: 1591795

Strand: Reverse

Name: hflC [H]

Synonym: Bphy_1412

Alternate gene names: 186476170

Gene position: 1591795-1590881 (Counterclockwise)

Preceding gene: 186476171

Following gene: 186476169

Centisome position: 45.75

GC content: 65.25

Gene sequence:

>915_bases
ATGAATAAAATCGTTGCGCTCGTCGTGGCCATCGTCATCGTGCTGTTTGCGGCATCGTCGATGGTGTTCGTTGTCGACCA
GCGGCATATGGCCGTCGTGTCGGCGCGCGGCGACGCCGCGCCGGTGCTCGCCGGTCCGGGTCTGCACGTGAAGCTGCCGC
CGCCGTTGCAAACCGTGACGTCGGTGGACACGCGCATCCAGTCGCTCGATACGCCGGATGAAGACCGCTACGCCACGTCC
GACAAGACAGACTTGCTCGTCAATCCCGTCGTCAAGTTCCGCGTGTCGGATCCCGTCAAGCTCGTCTCGGAAACGAAGGG
TGACGTGCAAAGCTTGCCCGAACGTCTCGCGCTGCTCACGCGCGGCGCGCTCGGCGACGCGTTTGCGAAGTACACGCTGC
CGGACGCGCTCGCGAAGCAGGACGCGATCGGGACGCAAGCGCGCGACAACATGCAGAAGGGCGCGGCCTCGCTGGGCGTC
GAGATCGTCGACGTGACGCTCACGCGCATCGACTTTCCGGCGGCAATGGCAGACTCCGTCTACAAGCGGATGATCGCCGC
ACGCGAAGAGATTGCGAACCGGGAACGCGCGGAAGGCGCGTCGGAAGCGGACAGGGTCAAGGCGGACGCAGCACAGCAGC
AGCAGGCGGTGCTCGCCGATGCGTACAAGCAGGCGCAGGCGATCAAGGGTGAAGGCGACGGCAAGGCAGCGTCGATTGCC
GCTGAAGCGTACGGCCAGGATCCGCAGTTCTACCGGTTTTACCAGAGCATGCAGGCGTACAGGAACAGCTTCAAGCCGGG
CGACGTGATGGTCGTCGACTCGAGCAGCGAGTTCTTCCGCTTCATGCGCGGCCCGGACGGCGGCACAGCCGTCCCATCGA
CTTCCGGCGCGCCGACGGGCGCGCACAAACACTGA

Upstream 100 bases:

>100_bases
AGCAGCGCAAGTCAGGCGGCAGCCGCGAGCGACGCCTTCCGTTCGCGCGATTCGTTCCGCAGTCGCGGCCGCGAAGACGA
TCTGCAATAAGGAGCGCCAA

Downstream 100 bases:

>100_bases
TTACCGGAACGCCGCGGCATACGAATCGCGGCGGCCTCATCGCATGGACATAGCCGGCTCGTTATTGCTCGCGATCGCAC
TAATGCTGATCATCGAGGGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 304; Mature: 304

Protein sequence:

>304_residues
MNKIVALVVAIVIVLFAASSMVFVVDQRHMAVVSARGDAAPVLAGPGLHVKLPPPLQTVTSVDTRIQSLDTPDEDRYATS
DKTDLLVNPVVKFRVSDPVKLVSETKGDVQSLPERLALLTRGALGDAFAKYTLPDALAKQDAIGTQARDNMQKGAASLGV
EIVDVTLTRIDFPAAMADSVYKRMIAAREEIANRERAEGASEADRVKADAAQQQQAVLADAYKQAQAIKGEGDGKAASIA
AEAYGQDPQFYRFYQSMQAYRNSFKPGDVMVVDSSSEFFRFMRGPDGGTAVPSTSGAPTGAHKH

Sequences:

>Translated_304_residues
MNKIVALVVAIVIVLFAASSMVFVVDQRHMAVVSARGDAAPVLAGPGLHVKLPPPLQTVTSVDTRIQSLDTPDEDRYATS
DKTDLLVNPVVKFRVSDPVKLVSETKGDVQSLPERLALLTRGALGDAFAKYTLPDALAKQDAIGTQARDNMQKGAASLGV
EIVDVTLTRIDFPAAMADSVYKRMIAAREEIANRERAEGASEADRVKADAAQQQQAVLADAYKQAQAIKGEGDGKAASIA
AEAYGQDPQFYRFYQSMQAYRNSFKPGDVMVVDSSSEFFRFMRGPDGGTAVPSTSGAPTGAHKH
>Mature_304_residues
MNKIVALVVAIVIVLFAASSMVFVVDQRHMAVVSARGDAAPVLAGPGLHVKLPPPLQTVTSVDTRIQSLDTPDEDRYATS
DKTDLLVNPVVKFRVSDPVKLVSETKGDVQSLPERLALLTRGALGDAFAKYTLPDALAKQDAIGTQARDNMQKGAASLGV
EIVDVTLTRIDFPAAMADSVYKRMIAAREEIANRERAEGASEADRVKADAAQQQQAVLADAYKQAQAIKGEGDGKAASIA
AEAYGQDPQFYRFYQSMQAYRNSFKPGDVMVVDSSSEFFRFMRGPDGGTAVPSTSGAPTGAHKH

Specific function: HflC and HflK could encode or regulate a protease [H]

COG id: COG0330

COG function: function code O; Membrane protease subunits, stomatin/prohibitin homologs

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the band 7/mec-2 family. HflC subfamily [H]

Homologues:

Organism=Escherichia coli, GI1790617, Length=319, Percent_Identity=31.0344827586207, Blast_Score=155, Evalue=2e-39,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001107
- InterPro:   IPR010200
- InterPro:   IPR001972 [H]

Pfam domain/function: PF01145 Band_7 [H]

EC number: 3.4.-.- [C]

Molecular weight: Translated: 32513; Mature: 32513

Theoretical pI: Translated: 6.16; Mature: 6.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKIVALVVAIVIVLFAASSMVFVVDQRHMAVVSARGDAAPVLAGPGLHVKLPPPLQTVT
CHHHHHHHHHHHHHHHHHCCEEEEEECCCEEEEECCCCCCCEEECCCCEEECCCCHHHHH
SVDTRIQSLDTPDEDRYATSDKTDLLVNPVVKFRVSDPVKLVSETKGDVQSLPERLALLT
HHHHHHHHCCCCCCCCCCCCCCCCCEECCHHEEECCCHHHHHHHCCCHHHHHHHHHHHHH
RGALGDAFAKYTLPDALAKQDAIGTQARDNMQKGAASLGVEIVDVTLTRIDFPAAMADSV
HCCHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHCEEEEEEEEHHHCCCHHHHHHH
YKRMIAAREEIANRERAEGASEADRVKADAAQQQQAVLADAYKQAQAIKGEGDGKAASIA
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH
AEAYGQDPQFYRFYQSMQAYRNSFKPGDVMVVDSSSEFFRFMRGPDGGTAVPSTSGAPTG
HHHCCCCHHHHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHCCCCCCCCCCCCCCCCCC
AHKH
CCCC
>Mature Secondary Structure
MNKIVALVVAIVIVLFAASSMVFVVDQRHMAVVSARGDAAPVLAGPGLHVKLPPPLQTVT
CHHHHHHHHHHHHHHHHHCCEEEEEECCCEEEEECCCCCCCEEECCCCEEECCCCHHHHH
SVDTRIQSLDTPDEDRYATSDKTDLLVNPVVKFRVSDPVKLVSETKGDVQSLPERLALLT
HHHHHHHHCCCCCCCCCCCCCCCCCEECCHHEEECCCHHHHHHHCCCHHHHHHHHHHHHH
RGALGDAFAKYTLPDALAKQDAIGTQARDNMQKGAASLGVEIVDVTLTRIDFPAAMADSV
HCCHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHCEEEEEEEEHHHCCCHHHHHHH
YKRMIAAREEIANRERAEGASEADRVKADAAQQQQAVLADAYKQAQAIKGEGDGKAASIA
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH
AEAYGQDPQFYRFYQSMQAYRNSFKPGDVMVVDSSSEFFRFMRGPDGGTAVPSTSGAPTG
HHHCCCCHHHHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHCCCCCCCCCCCCCCCCCC
AHKH
CCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Hydrolase; Acting on peptide bonds (Peptidases) [C]

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12089438 [H]