| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is yeaZ [H]
Identifier: 186476123
GI number: 186476123
Start: 1532527
End: 1533366
Strand: Reverse
Name: yeaZ [H]
Synonym: Bphy_1365
Alternate gene names: 186476123
Gene position: 1533366-1532527 (Counterclockwise)
Preceding gene: 186476127
Following gene: 186476122
Centisome position: 44.07
GC content: 69.4
Gene sequence:
>840_bases ATGACGAAAACCGTGCTGCTTGCCCTCGATACTTCGACCGAATTTTGCTCGGTCGCACTCCTGACCGCCGAATCCGCCAG CGATGCGTCCCCGGCCGAGGCGGACGCGCCTGCTCCGGAACGACGCGTGTGGGTACGCCATGAAGAGACGGGCGCCGTTT CGAGTACACGCCTGCTGCCCGCCATCCGTGAACTGTTCGAAGAAGCGGGCCTCGCGCTGGCCGACTGCAACGCGATCGCA TTCGGCGCGGGGCCGGGGTCGTTCACCGGCCTGCGCACTGCAACGGGCGTCGCGCAAGGTCTCGCGTTTGGACTGAATTG CCCCGTGGTTCCCATCGGCACGCTGCTCGTATGCGCTGAAAGCGCGCGCCTGCGCGATCCGTCGGCGGCGCGCGTGCTTG CGGCGCTCGACGCGCGCATGGACGAGGTCTATTGGGCTGACTACGCGTGGGACGAGGGCGCGGGCGAGTGGCGCACGGTT CATCCCGCATCGCTGGCTGCACCGGACGCACTGCCCTGTCCCGATCAGCCGTTCACGCTCGCAGGCAATGCCGCGGCTGC GTTCGGCGAACGTCTCAAGGCGACAGCCGCCGCACGCCATGTCGACCGGGAAGCTGTTCCGCACGCGCTGCCCCTGGCGT TCGCGGCACTGCGGGCATTCCGGGCCGGCCGTACGCTGCCCGCCGATCAGGCCGCGCCGGAATACATCCGCGACAAGGTT GCGCAGACCACGGAAGAGCGCATGGCTGCCAAGGCTGCGCAGTCGGCTGCCGTGTCGTCGGGACAGCCGGGCCATGCAGG CCGGTCCACTCGCGCCGCGCACGACGAGGGCGCGCGATGA
Upstream 100 bases:
>100_bases GAAGCTCGAGCGATCCTTCCAAACGCTGAGCGTGGCAGTGCGTTCACGTTGGGTTGTGTTCGCATCCGGCGACGCAGGGT GCCGCATTACAATAGCGGTC
Downstream 100 bases:
>100_bases GCGGCGTGCTGCTGGCGGACCGCTATATGTCGCCGATGACGGAAGGCGATCTCGACGAGGTCGCGGTGGTGGAGAAGCTC GCGTACGAGTTTCCGTGGAG
Product: peptidase M22 glycoprotease
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 279; Mature: 278
Protein sequence:
>279_residues MTKTVLLALDTSTEFCSVALLTAESASDASPAEADAPAPERRVWVRHEETGAVSSTRLLPAIRELFEEAGLALADCNAIA FGAGPGSFTGLRTATGVAQGLAFGLNCPVVPIGTLLVCAESARLRDPSAARVLAALDARMDEVYWADYAWDEGAGEWRTV HPASLAAPDALPCPDQPFTLAGNAAAAFGERLKATAAARHVDREAVPHALPLAFAALRAFRAGRTLPADQAAPEYIRDKV AQTTEERMAAKAAQSAAVSSGQPGHAGRSTRAAHDEGAR
Sequences:
>Translated_279_residues MTKTVLLALDTSTEFCSVALLTAESASDASPAEADAPAPERRVWVRHEETGAVSSTRLLPAIRELFEEAGLALADCNAIA FGAGPGSFTGLRTATGVAQGLAFGLNCPVVPIGTLLVCAESARLRDPSAARVLAALDARMDEVYWADYAWDEGAGEWRTV HPASLAAPDALPCPDQPFTLAGNAAAAFGERLKATAAARHVDREAVPHALPLAFAALRAFRAGRTLPADQAAPEYIRDKV AQTTEERMAAKAAQSAAVSSGQPGHAGRSTRAAHDEGAR >Mature_278_residues TKTVLLALDTSTEFCSVALLTAESASDASPAEADAPAPERRVWVRHEETGAVSSTRLLPAIRELFEEAGLALADCNAIAF GAGPGSFTGLRTATGVAQGLAFGLNCPVVPIGTLLVCAESARLRDPSAARVLAALDARMDEVYWADYAWDEGAGEWRTVH PASLAAPDALPCPDQPFTLAGNAAAAFGERLKATAAARHVDREAVPHALPLAFAALRAFRAGRTLPADQAAPEYIRDKVA QTTEERMAAKAAQSAAVSSGQPGHAGRSTRAAHDEGAR
Specific function: Unknown
COG id: COG1214
COG function: function code O; Inactive homolog of metal-dependent proteases, putative molecular chaperone
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M22 family [H]
Homologues:
Organism=Escherichia coli, GI1788109, Length=243, Percent_Identity=33.7448559670782, Blast_Score=125, Evalue=3e-30,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022496 - InterPro: IPR000905 [H]
Pfam domain/function: PF00814 Peptidase_M22 [H]
EC number: NA
Molecular weight: Translated: 29037; Mature: 28906
Theoretical pI: Translated: 5.17; Mature: 5.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKTVLLALDTSTEFCSVALLTAESASDASPAEADAPAPERRVWVRHEETGAVSSTRLLP CCCEEEEEEECCCCHHEEEEEEECCCCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHH AIRELFEEAGLALADCNAIAFGAGPGSFTGLRTATGVAQGLAFGLNCPVVPIGTLLVCAE HHHHHHHHCCCEEECCCEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH SARLRDPSAARVLAALDARMDEVYWADYAWDEGAGEWRTVHPASLAAPDALPCPDQPFTL HHHCCCCHHHHHHHHHHHHHHHHEEECCCCCCCCCCCEEECCHHHCCCCCCCCCCCCEEE AGNAAAAFGERLKATAAARHVDREAVPHALPLAFAALRAFRAGRTLPADQAAPEYIRDKV CCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHH AQTTEERMAAKAAQSAAVSSGQPGHAGRSTRAAHDEGAR HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure TKTVLLALDTSTEFCSVALLTAESASDASPAEADAPAPERRVWVRHEETGAVSSTRLLP CCEEEEEEECCCCHHEEEEEEECCCCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHH AIRELFEEAGLALADCNAIAFGAGPGSFTGLRTATGVAQGLAFGLNCPVVPIGTLLVCAE HHHHHHHHCCCEEECCCEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH SARLRDPSAARVLAALDARMDEVYWADYAWDEGAGEWRTVHPASLAAPDALPCPDQPFTL HHHCCCCHHHHHHHHHHHHHHHHEEECCCCCCCCCCCEEECCHHHCCCCCCCCCCCCEEE AGNAAAAFGERLKATAAARHVDREAVPHALPLAFAALRAFRAGRTLPADQAAPEYIRDKV CCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHH AQTTEERMAAKAAQSAAVSSGQPGHAGRSTRAAHDEGAR HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9097040; 9278503 [H]